RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 VSIG8P0DPA2 414 aa7.16□□□□□ -1.26
SCN9A-203ENST00000409672 UNQ6494/PRO21346Q6UXR6 183 aa7.16□□□□□ -1.26
SCN9A-203ENST00000409672 GCSAMQ8N6F7 178 aa7.16□□□□□ -1.26
SCN9A-203ENST00000409672 ZNF430Q9H8G1 570 aaPredicted RBP7.16□□□□□ -1.26
SCN9A-203ENST00000409672 LRP5O75197 1615 aa7.16□□□□□ -1.26
SCN9A-203ENST00000409672 ELOVL5Q9NYP7 299 aa7.16□□□□□ -1.26
SCN9A-203ENST00000409672 MSGN1A6NI15 193 aa7.16□□□□□ -1.26
SCN9A-203ENST00000409672 LHBP01229 141 aa7.16□□□□□ -1.26
SCN9A-203ENST00000409672 CCL3L1P16619 93 aa7.16□□□□□ -1.26
SCN9A-203ENST00000409672 DNM1P46Q6ZS02 220 aa7.16□□□□□ -1.26
SCN9A-203ENST00000409672 ALKBH7Q9BT30 221 aaPredicted RBP7.16□□□□□ -1.26
SCN9A-203ENST00000409672 PRSS22Q9GZN4 317 aa7.16□□□□□ -1.26
SCN9A-203ENST00000409672 ZGRF1Q86YA3 2104 aa7.16□□□□□ -1.26
SCN9A-203ENST00000409672 CXCL3P19876 107 aa7.16□□□□□ -1.26
SCN9A-203ENST00000409672 LY6HO94772 140 aa7.15□□□□□ -1.26
SCN9A-203ENST00000409672 HKR1P10072 659 aa7.15□□□□□ -1.26
SCN9A-203ENST00000409672 ATP6V0CP27449 155 aa7.15□□□□□ -1.26
SCN9A-203ENST00000409672 CHRNA10Q9GZZ6 450 aa7.15□□□□□ -1.26
SCN9A-203ENST00000409672 IGHV4-39P01824 125 aa7.15□□□□□ -1.26
SCN9A-203ENST00000409672 OR9G1Q8NH87 305 aa7.15□□□□□ -1.26
SCN9A-203ENST00000409672 H3BQ15 152 aa7.15□□□□□ -1.26
SCN9A-203ENST00000409672 EVI2AP22794 236 aa7.15□□□□□ -1.26
SCN9A-203ENST00000409672 CNTFRP26992 372 aa7.15□□□□□ -1.26
SCN9A-203ENST00000409672 SLC17A5Q9NRA2 495 aa7.15□□□□□ -1.26
SCN9A-203ENST00000409672 LILRA1O75019 489 aa7.15□□□□□ -1.26
SCN9A-203ENST00000409672 EFEMP2O95967 443 aa7.15□□□□□ -1.26
SCN9A-203ENST00000409672 CYB5R2Q6BCY4 276 aa7.15□□□□□ -1.26
SCN9A-203ENST00000409672 TMEM167AQ8TBQ9 72 aa7.15□□□□□ -1.26
SCN9A-203ENST00000409672 SCMH1Q96GD3 660 aa7.15□□□□□ -1.26
SCN9A-203ENST00000409672 ANGPTL4Q9BY76 406 aa7.15□□□□□ -1.26
SCN9A-203ENST00000409672 A8MWL6 223 aa7.15□□□□□ -1.26
SCN9A-203ENST00000409672 NDUFA2O43678 99 aa7.15□□□□□ -1.26
SCN9A-203ENST00000409672 LCNL1Q6ZST4 164 aa7.15□□□□□ -1.26
SCN9A-203ENST00000409672 KCNK7Q9Y2U2 307 aa7.15□□□□□ -1.26
SCN9A-203ENST00000409672 C1QL1O75973 258 aa7.15□□□□□ -1.27
SCN9A-203ENST00000409672 CECR9P0C854 216 aa7.15□□□□□ -1.27
SCN9A-203ENST00000409672 CFHR1Q03591 330 aa7.15□□□□□ -1.27
SCN9A-203ENST00000409672 FBLN7Q53RD9 439 aa7.15□□□□□ -1.27
SCN9A-203ENST00000409672 LRRK1Q38SD2 2015 aa7.15□□□□□ -1.27
SCN9A-203ENST00000409672 RPS11P62280 158 aaKnown RBP eCLIP7.15□□□□□ -1.27
SCN9A-203ENST00000409672 ZNF329Q86UD4 541 aa7.15□□□□□ -1.27
SCN9A-203ENST00000409672 SEPSECSQ9HD40 501 aaKnown RBP7.15□□□□□ -1.27
SCN9A-203ENST00000409672 IGKV1-8A0A0C4DH67 115 aa7.14□□□□□ -1.27
SCN9A-203ENST00000409672 CBLN2Q8IUK8 224 aa7.14□□□□□ -1.27
SCN9A-203ENST00000409672 C9orf106Q8NAJ2 232 aa7.14□□□□□ -1.27
SCN9A-203ENST00000409672 CHCHD5Q9BSY4 110 aa7.14□□□□□ -1.27
SCN9A-203ENST00000409672 MARCH11A6NNE9 402 aa7.14□□□□□ -1.27
SCN9A-203ENST00000409672 KLHL30-AS1Q8NEE0 82 aa7.14□□□□□ -1.27
SCN9A-203ENST00000409672 SH3BGRL3Q9H299 93 aa7.14□□□□□ -1.27
SCN9A-203ENST00000409672 LOC390937A0A1W2PQ73 354 aa7.14□□□□□ -1.27
SCN9A-203ENST00000409672 RRHO14718 337 aa7.14□□□□□ -1.27
SCN9A-203ENST00000409672 KLK2P20151 261 aa7.14□□□□□ -1.27
SCN9A-203ENST00000409672 NANOS3P60323 173 aaKnown RBP7.14□□□□□ -1.27
SCN9A-203ENST00000409672 SPATA45Q537H7 98 aa7.14□□□□□ -1.27
SCN9A-203ENST00000409672 FAM57AQ8TBR7 257 aa7.14□□□□□ -1.27
SCN9A-203ENST00000409672 NEU4Q8WWR8 484 aaPredicted RBP7.14□□□□□ -1.27
SCN9A-203ENST00000409672 GATA2P23769 480 aaPredicted RBP7.14□□□□□ -1.27
SCN9A-203ENST00000409672 OR13A1Q8NGR1 328 aa7.14□□□□□ -1.27
SCN9A-203ENST00000409672 HSPB9Q9BQS6 159 aa7.14□□□□□ -1.27
SCN9A-203ENST00000409672 PARLQ9H300 379 aa7.14□□□□□ -1.27
SCN9A-203ENST00000409672 LYRM2Q9NU23 88 aaPredicted RBP7.14□□□□□ -1.27
SCN9A-203ENST00000409672 OR5AC2Q9NZP5 309 aa7.14□□□□□ -1.27
SCN9A-203ENST00000409672 IGHV1-2P23083 117 aa7.14□□□□□ -1.27
SCN9A-203ENST00000409672 PRSS53Q2L4Q9 553 aa7.14□□□□□ -1.27
SCN9A-203ENST00000409672 C1orf53Q5VUE5 145 aa7.14□□□□□ -1.27
SCN9A-203ENST00000409672 MARS2Q96GW9 593 aaKnown RBP7.14□□□□□ -1.27
SCN9A-203ENST00000409672 RNF223E7ERA6 249 aa7.14□□□□□ -1.27
SCN9A-203ENST00000409672 TGFBR3LH3BV60 316 aa7.14□□□□□ -1.27
SCN9A-203ENST00000409672 PTP4A3O75365 173 aa7.14□□□□□ -1.27
SCN9A-203ENST00000409672 APOMO95445 188 aa7.14□□□□□ -1.27
SCN9A-203ENST00000409672 CD160O95971 181 aa7.14□□□□□ -1.27
SCN9A-203ENST00000409672 PHLDA1Q8WV24 401 aaPredicted RBP7.14□□□□□ -1.27
SCN9A-203ENST00000409672 A0A0G2JLM5 398 aa7.14□□□□□ -1.27
SCN9A-203ENST00000409672 PGLYRP1O75594 196 aaPredicted RBP7.14□□□□□ -1.27
SCN9A-203ENST00000409672 STAG3L2P0CL84 134 aa7.14□□□□□ -1.27
SCN9A-203ENST00000409672 CLDND2Q8NHS1 167 aa7.14□□□□□ -1.27
SCN9A-203ENST00000409672 SLC25A20O43772 301 aa7.13□□□□□ -1.27
SCN9A-203ENST00000409672 TBR1Q16650 682 aa7.13□□□□□ -1.27
SCN9A-203ENST00000409672 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.13□□□□□ -1.27
SCN9A-203ENST00000409672 FAM27BQ5VT28 67 aa7.13□□□□□ -1.27
SCN9A-203ENST00000409672 CYB561D1Q8N8Q1 229 aa7.13□□□□□ -1.27
SCN9A-203ENST00000409672 CLRN3Q8NCR9 226 aa7.13□□□□□ -1.27
SCN9A-203ENST00000409672 ANXA2RQ3ZCQ2 193 aa7.13□□□□□ -1.27
SCN9A-203ENST00000409672 PRR31Q5SQ13 230 aa7.13□□□□□ -1.27
SCN9A-203ENST00000409672 C1QTNF12Q5T7M4 302 aa7.13□□□□□ -1.27
SCN9A-203ENST00000409672 ERASQ7Z444 233 aa7.13□□□□□ -1.27
SCN9A-203ENST00000409672 LRTM2Q8N967 370 aa7.13□□□□□ -1.27
SCN9A-203ENST00000409672 C10orf35Q96D05 121 aa7.13□□□□□ -1.27
SCN9A-203ENST00000409672 SDF2L1Q9HCN8 221 aa7.13□□□□□ -1.27
SCN9A-203ENST00000409672 RBBP6Q7Z6E9 1792 aaKnown RBP7.13□□□□□ -1.27
SCN9A-203ENST00000409672 TRAV30A0A087WSZ9 112 aa7.13□□□□□ -1.27
SCN9A-203ENST00000409672 A0A087X0M5 115 aa7.13□□□□□ -1.27
SCN9A-203ENST00000409672 A0A1B0GX30 115 aa7.13□□□□□ -1.27
SCN9A-203ENST00000409672 TCF21O43680 179 aa7.13□□□□□ -1.27
SCN9A-203ENST00000409672 ASIPP42127 132 aa7.13□□□□□ -1.27
SCN9A-203ENST00000409672 RARRES2Q99969 163 aa7.13□□□□□ -1.27
SCN9A-203ENST00000409672 MRPS16Q9Y3D3 137 aaKnown RBP7.13□□□□□ -1.27
SCN9A-203ENST00000409672 ERGP11308 486 aa7.13□□□□□ -1.27
SCN9A-203ENST00000409672 TTC32Q5I0X7 151 aa7.13□□□□□ -1.27
SCN9A-203ENST00000409672 MSRB3Q8IXL7 192 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms