RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 CXorf66Q5JRM2 361 aaPredicted RBP10.17□□□□□ -0.78
CHRNA1-205ENST00000409542 TMEM219Q86XT9 240 aa10.17□□□□□ -0.78
CHRNA1-205ENST00000409542 TMEM252Q8N6L7 170 aa10.17□□□□□ -0.78
CHRNA1-205ENST00000409542 CLRN3Q8NCR9 226 aa10.17□□□□□ -0.78
CHRNA1-205ENST00000409542 WFDC9Q8NEX5 89 aa10.17□□□□□ -0.78
CHRNA1-205ENST00000409542 OR4F17Q8NGA8 305 aa10.17□□□□□ -0.78
CHRNA1-205ENST00000409542 OR10Z1Q8NGY1 313 aa10.17□□□□□ -0.78
CHRNA1-205ENST00000409542 OR4F4Q96R69 305 aa10.17□□□□□ -0.78
CHRNA1-205ENST00000409542 WNT10AQ9GZT5 417 aa10.17□□□□□ -0.78
CHRNA1-205ENST00000409542 C19orf12Q9NSK7 152 aa10.17□□□□□ -0.78
CHRNA1-205ENST00000409542 OR1A1Q9P1Q5 309 aa10.17□□□□□ -0.78
CHRNA1-205ENST00000409542 CACFD1Q9UGQ2 172 aa10.17□□□□□ -0.78
CHRNA1-205ENST00000409542 A0A1W2PRX2 142 aa10.16□□□□□ -0.78
CHRNA1-205ENST00000409542 TMEM30CPA0ZSE6 113 aa10.16□□□□□ -0.78
CHRNA1-205ENST00000409542 FAM24AA6NFZ4 105 aa10.16□□□□□ -0.78
CHRNA1-205ENST00000409542 SERPINE2P07093 398 aa10.16□□□□□ -0.78
CHRNA1-205ENST00000409542 CAMLGP49069 296 aa10.16□□□□□ -0.78
CHRNA1-205ENST00000409542 ARHGDIBP52566 201 aa10.16□□□□□ -0.78
CHRNA1-205ENST00000409542 MSMO1Q15800 293 aa10.16□□□□□ -0.78
CHRNA1-205ENST00000409542 TMEM95Q3KNT9 176 aa10.16□□□□□ -0.78
CHRNA1-205ENST00000409542 TOLLIPQ9H0E2 274 aa10.16□□□□□ -0.78
CHRNA1-205ENST00000409542 TMEM231Q9H6L2 316 aa10.16□□□□□ -0.78
CHRNA1-205ENST00000409542 LIN7CQ9NUP9 197 aaKnown RBP10.16□□□□□ -0.78
CHRNA1-205ENST00000409542 UMAD1C9J7I0 102 aa10.15□□□□□ -0.78
CHRNA1-205ENST00000409542 K7N7A8 449 aa10.15□□□□□ -0.78
CHRNA1-205ENST00000409542 NUPL2O15504 423 aaKnown RBP10.15□□□□□ -0.78
CHRNA1-205ENST00000409542 TNFSF12O43508 249 aa10.15□□□□□ -0.78
CHRNA1-205ENST00000409542 IGLV2-14P01704 120 aa10.15□□□□□ -0.78
CHRNA1-205ENST00000409542 H2AFB1P0C5Y9 115 aa10.15□□□□□ -0.78
CHRNA1-205ENST00000409542 SFTA3P0C7M3 94 aa10.15□□□□□ -0.78
CHRNA1-205ENST00000409542 OR8U9P0C7N5 309 aa10.15□□□□□ -0.78
CHRNA1-205ENST00000409542 PSG2P11465 335 aa10.15□□□□□ -0.78
CHRNA1-205ENST00000409542 CD33P20138 364 aa10.15□□□□□ -0.78
CHRNA1-205ENST00000409542 COX7A1P24310 79 aa10.15□□□□□ -0.78
CHRNA1-205ENST00000409542 SNCAP37840 140 aa10.15□□□□□ -0.78
CHRNA1-205ENST00000409542 DEFB121Q5J5C9 76 aa10.15□□□□□ -0.78
CHRNA1-205ENST00000409542 LDLRAD2Q5SZI1 272 aa10.15□□□□□ -0.78
CHRNA1-205ENST00000409542 ZBTB34Q8NCN2 500 aa10.15□□□□□ -0.78
CHRNA1-205ENST00000409542 LFNGQ8NES3 379 aa10.15□□□□□ -0.78
CHRNA1-205ENST00000409542 OR8U1Q8NH10 309 aa10.15□□□□□ -0.78
CHRNA1-205ENST00000409542 IL1F10Q8WWZ1 152 aa10.15□□□□□ -0.78
CHRNA1-205ENST00000409542 GPR146Q96CH1 333 aa10.15□□□□□ -0.78
CHRNA1-205ENST00000409542 RAB40CQ96S21 281 aa10.15□□□□□ -0.78
CHRNA1-205ENST00000409542 KCNIP1Q9NZI2 227 aa10.15□□□□□ -0.78
CHRNA1-205ENST00000409542 A0A0G2JRQ6 117 aa10.14□□□□□ -0.79
CHRNA1-205ENST00000409542 A0A1B0GW64 132 aa10.14□□□□□ -0.79
CHRNA1-205ENST00000409542 A6NDX4 124 aa10.14□□□□□ -0.79
CHRNA1-205ENST00000409542 WRBO00258 174 aa10.14□□□□□ -0.79
CHRNA1-205ENST00000409542 TOR1AO14656 332 aa10.14□□□□□ -0.79
CHRNA1-205ENST00000409542 HSPA12AO43301 675 aa10.14□□□□□ -0.79
CHRNA1-205ENST00000409542 CCL3L1P16619 93 aa10.14□□□□□ -0.79
CHRNA1-205ENST00000409542 BLCAPP62952 87 aa10.14□□□□□ -0.79
CHRNA1-205ENST00000409542 PEA15Q15121 130 aa10.14□□□□□ -0.79
CHRNA1-205ENST00000409542 ACP7Q6ZNF0 438 aa10.14□□□□□ -0.79
CHRNA1-205ENST00000409542 ODF3L1Q8IXM7 274 aa10.14□□□□□ -0.79
CHRNA1-205ENST00000409542 HSD17B11Q8NBQ5 300 aa10.14□□□□□ -0.79
CHRNA1-205ENST00000409542 OR51H1Q8NH63 302 aa10.14□□□□□ -0.79
CHRNA1-205ENST00000409542 GNPNAT1Q96EK6 184 aaPredicted RBP10.14□□□□□ -0.79
CHRNA1-205ENST00000409542 GPHA2Q96T91 129 aa10.14□□□□□ -0.79
CHRNA1-205ENST00000409542 MAGT1Q9H0U3 335 aa10.14□□□□□ -0.79
CHRNA1-205ENST00000409542 SH3BGRL3Q9H299 93 aa10.14□□□□□ -0.79
CHRNA1-205ENST00000409542 TCF19Q9Y242 345 aa10.14□□□□□ -0.79
CHRNA1-205ENST00000409542 TRAV39A0A0B4J263 110 aa10.13□□□□□ -0.79
CHRNA1-205ENST00000409542 TMEM50AO95807 157 aa10.13□□□□□ -0.79
CHRNA1-205ENST00000409542 IGKV1-39P01597 117 aa10.13□□□□□ -0.79
CHRNA1-205ENST00000409542 IGKV1D-39P04432 117 aa10.13□□□□□ -0.79
CHRNA1-205ENST00000409542 PAX9P55771 341 aa10.13□□□□□ -0.79
CHRNA1-205ENST00000409542 RPL23AP62750 156 aaKnown RBP10.13□□□□□ -0.79
CHRNA1-205ENST00000409542 PAX5Q02548 391 aa10.13□□□□□ -0.79
CHRNA1-205ENST00000409542 TCTEX1D4Q5JR98 221 aa10.13□□□□□ -0.79
CHRNA1-205ENST00000409542 TMEM200BQ69YZ2 307 aa10.13□□□□□ -0.79
CHRNA1-205ENST00000409542 CD177Q8N6Q3 437 aa10.13□□□□□ -0.79
CHRNA1-205ENST00000409542 SCRT1Q9BWW7 348 aa10.13□□□□□ -0.79
CHRNA1-205ENST00000409542 SEBOXQ9HB31 216 aaPredicted RBP10.13□□□□□ -0.79
CHRNA1-205ENST00000409542 TRBV23-1A0A0A0MS06 115 aa10.12□□□□□ -0.79
CHRNA1-205ENST00000409542 C9JQL5 133 aa10.12□□□□□ -0.79
CHRNA1-205ENST00000409542 PSPNO60542 156 aa10.12□□□□□ -0.79
CHRNA1-205ENST00000409542 DFFBO76075 338 aa10.12□□□□□ -0.79
CHRNA1-205ENST00000409542 PRH1P02810 166 aa10.12□□□□□ -0.79
CHRNA1-205ENST00000409542 ATP6V0CP27449 155 aa10.12□□□□□ -0.79
CHRNA1-205ENST00000409542 CEACAM6P40199 344 aa10.12□□□□□ -0.79
CHRNA1-205ENST00000409542 NPBWR1P48145 328 aa10.12□□□□□ -0.79
CHRNA1-205ENST00000409542 DYNLT3P51808 116 aa10.12□□□□□ -0.79
CHRNA1-205ENST00000409542 ZNF616Q08AN1 781 aa10.12□□□□□ -0.79
CHRNA1-205ENST00000409542 CLINT1Q14677 625 aa10.12□□□□□ -0.79
CHRNA1-205ENST00000409542 GUK1Q16774 197 aa10.12□□□□□ -0.79
CHRNA1-205ENST00000409542 SMIM21Q3B7S5 101 aa10.12□□□□□ -0.79
CHRNA1-205ENST00000409542 SMUG1Q53HV7 270 aa10.12□□□□□ -0.79
CHRNA1-205ENST00000409542 FAM122CQ6P4D5 195 aa10.12□□□□□ -0.79
CHRNA1-205ENST00000409542 TMEM182Q6ZP80 229 aaPredicted RBP10.12□□□□□ -0.79
CHRNA1-205ENST00000409542 DRAM1Q8N682 238 aa10.12□□□□□ -0.79
CHRNA1-205ENST00000409542 ZNF645Q8N7E2 425 aa10.12□□□□□ -0.79
CHRNA1-205ENST00000409542 OR5C1Q8NGR4 320 aa10.12□□□□□ -0.79
CHRNA1-205ENST00000409542 SDSLQ96GA7 329 aa10.12□□□□□ -0.79
CHRNA1-205ENST00000409542 WWC2-AS2Q96NR7 200 aa10.12□□□□□ -0.79
CHRNA1-205ENST00000409542 ATP5SQ99766 215 aa10.12□□□□□ -0.79
CHRNA1-205ENST00000409542 PBDC1Q9BVG4 233 aa10.12□□□□□ -0.79
CHRNA1-205ENST00000409542 OR14J1Q9UGF5 321 aa10.12□□□□□ -0.79
CHRNA1-205ENST00000409542 RYR2Q92736 4967 aa10.12□□□□□ -0.79
CHRNA1-205ENST00000409542 AGPAT2O15120 278 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms