RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 DEFA4P12838 97 aa12.51□□□□□ -0.41
SCAMP4-202ENST00000409472 TFF3Q07654 80 aa12.51□□□□□ -0.41
SCAMP4-202ENST00000409472 C4orf17Q53FE4 359 aa12.51□□□□□ -0.41
SCAMP4-202ENST00000409472 CT45A1Q5HYN5 189 aa12.51□□□□□ -0.41
SCAMP4-202ENST00000409472 OR1P1Q8NH06 330 aa12.51□□□□□ -0.41
SCAMP4-202ENST00000409472 CT45A3Q8NHU0 189 aa12.51□□□□□ -0.41
SCAMP4-202ENST00000409472 PPP1R35Q8TAP8 253 aa12.51□□□□□ -0.41
SCAMP4-202ENST00000409472 NEUROG1Q92886 237 aa12.51□□□□□ -0.41
SCAMP4-202ENST00000409472 SDSLQ96GA7 329 aa12.51□□□□□ -0.41
SCAMP4-202ENST00000409472 ZNF665Q9H7R5 613 aa12.51□□□□□ -0.41
SCAMP4-202ENST00000409472 TACC2O95359 2948 aa12.51□□□□□ -0.41
SCAMP4-202ENST00000409472 SAA2-SAA4A0A096LPE2 208 aa12.51□□□□□ -0.41
SCAMP4-202ENST00000409472 SAA2P0DJI9 122 aaPredicted RBP12.51□□□□□ -0.41
SCAMP4-202ENST00000409472 TLE1Q04724 770 aa12.51□□□□□ -0.41
SCAMP4-202ENST00000409472 TLE4Q04727 773 aa12.51□□□□□ -0.41
SCAMP4-202ENST00000409472 DMRTA1Q5VZB9 504 aa12.51□□□□□ -0.41
SCAMP4-202ENST00000409472 CYB561D1Q8N8Q1 229 aa12.51□□□□□ -0.41
SCAMP4-202ENST00000409472 TAF15Q92804 592 aaKnown RBP eCLIP12.51□□□□□ -0.41
SCAMP4-202ENST00000409472 GAL3ST2Q9H3Q3 398 aa12.51□□□□□ -0.41
SCAMP4-202ENST00000409472 JKAMPQ9P055 326 aa12.51□□□□□ -0.41
SCAMP4-202ENST00000409472 SCAF4O95104 1147 aaKnown RBP12.5□□□□□ -0.41
SCAMP4-202ENST00000409472 SELENOVP59797 346 aa12.5□□□□□ -0.41
SCAMP4-202ENST00000409472 ARSJQ5FYB0 599 aaPredicted RBP12.5□□□□□ -0.41
SCAMP4-202ENST00000409472 ACSM6Q6P461 480 aa12.5□□□□□ -0.41
SCAMP4-202ENST00000409472 TMEM242Q9NWH2 141 aa12.5□□□□□ -0.41
SCAMP4-202ENST00000409472 VAX2Q9UIW0 290 aa12.5□□□□□ -0.41
SCAMP4-202ENST00000409472 ZNF835Q9Y2P0 537 aa12.5□□□□□ -0.41
SCAMP4-202ENST00000409472 CEBPZOSA8MTT3 80 aa12.5□□□□□ -0.41
SCAMP4-202ENST00000409472 SRP19P09132 144 aaKnown RBP12.5□□□□□ -0.41
SCAMP4-202ENST00000409472 ZNF788Q6ZQV5 615 aa12.5□□□□□ -0.41
SCAMP4-202ENST00000409472 NCOR1P1Q9H4R4 102 aa12.5□□□□□ -0.41
SCAMP4-202ENST00000409472 OR6C3Q9NZP0 311 aa12.5□□□□□ -0.41
SCAMP4-202ENST00000409472 GNG13Q9P2W3 67 aa12.5□□□□□ -0.41
SCAMP4-202ENST00000409472 KBTBD11-OT1A0A1B0GTJ5 212 aa12.49□□□□□ -0.41
SCAMP4-202ENST00000409472 HMGB3O15347 200 aaKnown RBP12.49□□□□□ -0.41
SCAMP4-202ENST00000409472 PRAMEF5Q5TYX0 476 aa12.49□□□□□ -0.41
SCAMP4-202ENST00000409472 C22orf15Q8WYQ4 148 aa12.49□□□□□ -0.41
SCAMP4-202ENST00000409472 WFIKKN1Q96NZ8 548 aa12.49□□□□□ -0.41
SCAMP4-202ENST00000409472 ZFP92A6NM28 416 aa12.49□□□□□ -0.41
SCAMP4-202ENST00000409472 C15orf62A8K5M9 175 aa12.49□□□□□ -0.41
SCAMP4-202ENST00000409472 CLDN34H7C241 214 aa12.49□□□□□ -0.41
SCAMP4-202ENST00000409472 ITGB1BP1O14713 200 aa12.49□□□□□ -0.41
SCAMP4-202ENST00000409472 TMPRSS2O15393 492 aa12.49□□□□□ -0.41
SCAMP4-202ENST00000409472 RND2P52198 227 aa12.49□□□□□ -0.41
SCAMP4-202ENST00000409472 COA6Q5JTJ3 125 aaKnown RBP12.49□□□□□ -0.41
SCAMP4-202ENST00000409472 C1orf194Q5T5A4 169 aa12.49□□□□□ -0.41
SCAMP4-202ENST00000409472 DDB2Q92466 427 aa12.49□□□□□ -0.41
SCAMP4-202ENST00000409472 PSMG3Q9BT73 122 aaPredicted RBP12.49□□□□□ -0.41
SCAMP4-202ENST00000409472 CHD8Q9HCK8 2581 aa12.48□□□□□ -0.41
SCAMP4-202ENST00000409472 TRBV24-1A0A075B6N3 115 aa12.48□□□□□ -0.41
SCAMP4-202ENST00000409472 KIR2DL5BA0A0G2JN68 375 aa12.48□□□□□ -0.41
SCAMP4-202ENST00000409472 KIR2DL5BA0A0G2JPC4 375 aa12.48□□□□□ -0.41
SCAMP4-202ENST00000409472 C17orf100A8MU93 164 aa12.48□□□□□ -0.41
SCAMP4-202ENST00000409472 PPP5D1E7EU14 171 aa12.48□□□□□ -0.41
SCAMP4-202ENST00000409472 HSPB1P04792 205 aaKnown RBP12.48□□□□□ -0.41
SCAMP4-202ENST00000409472 MYOD1P15172 320 aa12.48□□□□□ -0.41
SCAMP4-202ENST00000409472 NHLH1Q02575 133 aa12.48□□□□□ -0.41
SCAMP4-202ENST00000409472 ZNF506Q5JVG8 444 aa12.48□□□□□ -0.41
SCAMP4-202ENST00000409472 ZNF787Q6DD87 383 aa12.48□□□□□ -0.41
SCAMP4-202ENST00000409472 KIR2DL5AQ8N109 375 aa12.48□□□□□ -0.41
SCAMP4-202ENST00000409472 TCTEX1D1Q8N7M0 179 aa12.48□□□□□ -0.41
SCAMP4-202ENST00000409472 TMEM18Q96B42 140 aa12.48□□□□□ -0.41
SCAMP4-202ENST00000409472 ELOVL5Q9NYP7 299 aa12.48□□□□□ -0.41
SCAMP4-202ENST00000409472 RPP25LQ8N5L8 163 aaKnown RBP12.48□□□□□ -0.41
SCAMP4-202ENST00000409472 ZNF439Q8NDP4 499 aa12.48□□□□□ -0.41
SCAMP4-202ENST00000409472 PIEZO1Q92508 2521 aa12.48□□□□□ -0.41
SCAMP4-202ENST00000409472 HRNRQ86YZ3 2850 aaPredicted RBP12.47□□□□□ -0.41
SCAMP4-202ENST00000409472 ARFGEF3Q5TH69 2177 aa12.47□□□□□ -0.41
SCAMP4-202ENST00000409472 TRGV10A0A0A0MS01 117 aa12.47□□□□□ -0.41
SCAMP4-202ENST00000409472 LOC102723971A0A1B0GUV8 181 aa12.47□□□□□ -0.41
SCAMP4-202ENST00000409472 HPRT1P00492 218 aa12.47□□□□□ -0.41
SCAMP4-202ENST00000409472 TNFSF4P23510 183 aa12.47□□□□□ -0.41
SCAMP4-202ENST00000409472 PNRC1Q12796 327 aaPredicted RBP12.47□□□□□ -0.41
SCAMP4-202ENST00000409472 DPPA3Q6W0C5 159 aa12.47□□□□□ -0.41
SCAMP4-202ENST00000409472 LYG1Q8N1E2 194 aa12.47□□□□□ -0.41
SCAMP4-202ENST00000409472 SLC25A22Q9H936 323 aa12.47□□□□□ -0.41
SCAMP4-202ENST00000409472 TMEM140Q9NV12 185 aa12.47□□□□□ -0.41
SCAMP4-202ENST00000409472 LAMP3Q9UQV4 416 aa12.47□□□□□ -0.41
SCAMP4-202ENST00000409472 A6NNC1 897 aa12.47□□□□□ -0.41
SCAMP4-202ENST00000409472 OPN1MWP04001 364 aa12.47□□□□□ -0.41
SCAMP4-202ENST00000409472 OPN1MW2P0DN77 364 aa12.47□□□□□ -0.41
SCAMP4-202ENST00000409472 OPN1MW3P0DN78 364 aa12.47□□□□□ -0.41
SCAMP4-202ENST00000409472 TMEM41BQ5BJD5 291 aa12.47□□□□□ -0.41
SCAMP4-202ENST00000409472 TEX36Q5VZQ5 186 aa12.47□□□□□ -0.41
SCAMP4-202ENST00000409472 ACY3Q96HD9 319 aa12.47□□□□□ -0.41
SCAMP4-202ENST00000409472 HIPK2Q9H2X6 1198 aa12.47□□□□□ -0.41
SCAMP4-202ENST00000409472 TNCP24821 2201 aa12.47□□□□□ -0.41
SCAMP4-202ENST00000409472 A0A1W2PPQ1 181 aa12.46□□□□□ -0.41
SCAMP4-202ENST00000409472 RPL29P47914 159 aaKnown RBP12.46□□□□□ -0.41
SCAMP4-202ENST00000409472 RELBQ01201 579 aa12.46□□□□□ -0.41
SCAMP4-202ENST00000409472 TEX38Q6PEX7 206 aa12.46□□□□□ -0.41
SCAMP4-202ENST00000409472 OR10A7Q8NGE5 316 aa12.46□□□□□ -0.41
SCAMP4-202ENST00000409472 TMEM170AQ8WVE7 144 aa12.46□□□□□ -0.41
SCAMP4-202ENST00000409472 S1PR3Q99500 378 aa12.46□□□□□ -0.41
SCAMP4-202ENST00000409472 TMEM147Q9BVK8 224 aa12.46□□□□□ -0.41
SCAMP4-202ENST00000409472 LPAR2Q9HBW0 351 aa12.46□□□□□ -0.41
SCAMP4-202ENST00000409472 TRAV1-1A0A0B4J248 108 aa12.45□□□□□ -0.42
SCAMP4-202ENST00000409472 MAP1LC3B2A6NCE7 125 aa12.45□□□□□ -0.42
SCAMP4-202ENST00000409472 CCL3L1P16619 93 aa12.45□□□□□ -0.42
SCAMP4-202ENST00000409472 COL8A2P25067 703 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 130.7 ms