RNA–Protein interactions for RNA: ENST00000407298.7

APOBEC3B-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene APOBEC3B, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-204ENST00000407298 ZNF45Q02386 682 aa9.18□□□□□ -0.94
APOBEC3B-204ENST00000407298 UBE2NLQ5JXB2 153 aa9.18□□□□□ -0.94
APOBEC3B-204ENST00000407298 RBPMS2Q6ZRY4 209 aaKnown RBP9.18□□□□□ -0.94
APOBEC3B-204ENST00000407298 HOGA1Q86XE5 327 aa9.18□□□□□ -0.94
APOBEC3B-204ENST00000407298 CROCCP3Q8IVE0 287 aa9.18□□□□□ -0.94
APOBEC3B-204ENST00000407298 MMD2Q8IY49 270 aa9.18□□□□□ -0.94
APOBEC3B-204ENST00000407298 SLC38A6Q8IZM9 456 aa9.18□□□□□ -0.94
APOBEC3B-204ENST00000407298 TMEM61Q8N0U2 210 aa9.18□□□□□ -0.94
APOBEC3B-204ENST00000407298 RPP25LQ8N5L8 163 aaKnown RBP9.18□□□□□ -0.94
APOBEC3B-204ENST00000407298 ZNF645Q8N7E2 425 aa9.18□□□□□ -0.94
APOBEC3B-204ENST00000407298 MARC2Q969Z3 335 aa9.18□□□□□ -0.94
APOBEC3B-204ENST00000407298 ANAPC10Q9UM13 185 aa9.18□□□□□ -0.94
APOBEC3B-204ENST00000407298 DPPA5A6NC42 116 aa9.17□□□□□ -0.94
APOBEC3B-204ENST00000407298 J3QRK9 145 aa9.17□□□□□ -0.94
APOBEC3B-204ENST00000407298 XRCC3O43542 346 aa9.17□□□□□ -0.94
APOBEC3B-204ENST00000407298 CRYZL1O95825 349 aa9.17□□□□□ -0.94
APOBEC3B-204ENST00000407298 DHFRP00374 187 aa9.17□□□□□ -0.94
APOBEC3B-204ENST00000407298 EIF4EP06730 217 aaKnown RBP9.17□□□□□ -0.94
APOBEC3B-204ENST00000407298 CTXN2P0C2S0 81 aa9.17□□□□□ -0.94
APOBEC3B-204ENST00000407298 ARL3P36405 182 aa9.17□□□□□ -0.94
APOBEC3B-204ENST00000407298 BRWD1-AS2P59051 145 aa9.17□□□□□ -0.94
APOBEC3B-204ENST00000407298 VBP1P61758 197 aa9.17□□□□□ -0.94
APOBEC3B-204ENST00000407298 CDK10Q15131 360 aa9.17□□□□□ -0.94
APOBEC3B-204ENST00000407298 TM4SF20Q53R12 229 aa9.17□□□□□ -0.94
APOBEC3B-204ENST00000407298 SAMD12Q8N8I0 201 aa9.17□□□□□ -0.94
APOBEC3B-204ENST00000407298 UXS1Q8NBZ7 420 aa9.17□□□□□ -0.94
APOBEC3B-204ENST00000407298 BEST4Q8NFU0 473 aa9.17□□□□□ -0.94
APOBEC3B-204ENST00000407298 ZNF430Q9H8G1 570 aaPredicted RBP9.17□□□□□ -0.94
APOBEC3B-204ENST00000407298 FBXL7Q9UJT9 491 aa9.17□□□□□ -0.94
APOBEC3B-204ENST00000407298 RBMX2Q9Y388 322 aaKnown RBP9.17□□□□□ -0.94
APOBEC3B-204ENST00000407298 MEIS3P1A6NDR6 274 aa9.16□□□□□ -0.94
APOBEC3B-204ENST00000407298 A8MWP6 167 aa9.16□□□□□ -0.94
APOBEC3B-204ENST00000407298 SCAF4O95104 1147 aaKnown RBP9.16□□□□□ -0.94
APOBEC3B-204ENST00000407298 GABARAPO95166 117 aa9.16□□□□□ -0.94
APOBEC3B-204ENST00000407298 HLA-AP01891 365 aaKnown RBP9.16□□□□□ -0.94
APOBEC3B-204ENST00000407298 FCER2P06734 321 aa9.16□□□□□ -0.94
APOBEC3B-204ENST00000407298 TAS2R20P59543 309 aa9.16□□□□□ -0.94
APOBEC3B-204ENST00000407298 CTF1Q16619 201 aa9.16□□□□□ -0.94
APOBEC3B-204ENST00000407298 IDO2Q6ZQW0 420 aa9.16□□□□□ -0.94
APOBEC3B-204ENST00000407298 OR2C3Q8N628 320 aa9.16□□□□□ -0.94
APOBEC3B-204ENST00000407298 STPG3Q8N7X2 389 aa9.16□□□□□ -0.94
APOBEC3B-204ENST00000407298 OR1L6Q8NGR2 347 aa9.16□□□□□ -0.94
APOBEC3B-204ENST00000407298 EEF1AKMT3Q96AZ1 226 aa9.16□□□□□ -0.94
APOBEC3B-204ENST00000407298 DCUN1D5Q9BTE7 237 aa9.16□□□□□ -0.94
APOBEC3B-204ENST00000407298 DIABLOQ9NR28 239 aa9.16□□□□□ -0.94
APOBEC3B-204ENST00000407298 MLXQ9UH92 298 aa9.16□□□□□ -0.94
APOBEC3B-204ENST00000407298 DMRT1Q9Y5R6 373 aa9.16□□□□□ -0.94
APOBEC3B-204ENST00000407298 KIR2DL5BA0A0G2JN68 375 aa9.15□□□□□ -0.94
APOBEC3B-204ENST00000407298 KIR2DL5BA0A0G2JPC4 375 aa9.15□□□□□ -0.94
APOBEC3B-204ENST00000407298 TMEM213A2RRL7 107 aa9.15□□□□□ -0.94
APOBEC3B-204ENST00000407298 NPIPB5A8MRT5 1133 aa9.15□□□□□ -0.94
APOBEC3B-204ENST00000407298 HIST1H1BP16401 226 aaKnown RBP9.15□□□□□ -0.94
APOBEC3B-204ENST00000407298 CLEC19AQ6UXS0 136 aa9.15□□□□□ -0.94
APOBEC3B-204ENST00000407298 KCTD9Q7L273 389 aa9.15□□□□□ -0.94
APOBEC3B-204ENST00000407298 KIR2DL5AQ8N109 375 aa9.15□□□□□ -0.94
APOBEC3B-204ENST00000407298 KIR2DL5BQ8NHK3 375 aa9.15□□□□□ -0.94
APOBEC3B-204ENST00000407298 VSTM2AQ8TAG5 236 aa9.15□□□□□ -0.94
APOBEC3B-204ENST00000407298 PHLDA1Q8WV24 401 aaPredicted RBP9.15□□□□□ -0.94
APOBEC3B-204ENST00000407298 CACNG8Q8WXS5 425 aa9.15□□□□□ -0.94
APOBEC3B-204ENST00000407298 GPHA2Q96T91 129 aa9.15□□□□□ -0.94
APOBEC3B-204ENST00000407298 PRELID3BQ9Y3B1 194 aa9.15□□□□□ -0.94
APOBEC3B-204ENST00000407298 HECTD4Q9Y4D8 3996 aa9.14□□□□□ -0.95
APOBEC3B-204ENST00000407298 TRBV7-1A0A0A6YYK4 115 aa9.14□□□□□ -0.95
APOBEC3B-204ENST00000407298 DEDDO75618 318 aa9.14□□□□□ -0.95
APOBEC3B-204ENST00000407298 PPYP01298 95 aa9.14□□□□□ -0.95
APOBEC3B-204ENST00000407298 SAA1P0DJI8 122 aaPredicted RBP9.14□□□□□ -0.95
APOBEC3B-204ENST00000407298 MYOD1P15172 320 aa9.14□□□□□ -0.95
APOBEC3B-204ENST00000407298 EDN2P20800 178 aa9.14□□□□□ -0.95
APOBEC3B-204ENST00000407298 FCGR2CP31995 323 aa9.14□□□□□ -0.95
APOBEC3B-204ENST00000407298 MAS1LP35410 378 aa9.14□□□□□ -0.95
APOBEC3B-204ENST00000407298 ALDH3B2P48448 385 aa9.14□□□□□ -0.95
APOBEC3B-204ENST00000407298 ELLP55199 621 aaPredicted RBP9.14□□□□□ -0.95
APOBEC3B-204ENST00000407298 ARPC4P59998 168 aa9.14□□□□□ -0.95
APOBEC3B-204ENST00000407298 EWSR1Q01844 656 aaKnown RBP eCLIP9.14□□□□□ -0.95
APOBEC3B-204ENST00000407298 DEFB135Q30KP9 77 aa9.14□□□□□ -0.95
APOBEC3B-204ENST00000407298 OR2B11Q5JQS5 317 aa9.14□□□□□ -0.95
APOBEC3B-204ENST00000407298 TMEM69Q5SWH9 247 aa9.14□□□□□ -0.95
APOBEC3B-204ENST00000407298 GATAD1Q8WUU5 269 aa9.14□□□□□ -0.95
APOBEC3B-204ENST00000407298 RNF183Q96D59 192 aa9.14□□□□□ -0.95
APOBEC3B-204ENST00000407298 S100A16Q96FQ6 103 aaKnown RBP9.14□□□□□ -0.95
APOBEC3B-204ENST00000407298 CXorf58Q96LI9 332 aa9.14□□□□□ -0.95
APOBEC3B-204ENST00000407298 CCL28Q9NRJ3 127 aa9.14□□□□□ -0.95
APOBEC3B-204ENST00000407298 SLC2A9Q9NRM0 540 aa9.14□□□□□ -0.95
APOBEC3B-204ENST00000407298 MRPL27Q9P0M9 148 aaKnown RBP9.14□□□□□ -0.95
APOBEC3B-204ENST00000407298 MRPS7Q9Y2R9 242 aaKnown RBP9.14□□□□□ -0.95
APOBEC3B-204ENST00000407298 FCGR3BO75015 233 aa9.13□□□□□ -0.95
APOBEC3B-204ENST00000407298 SLC22A5O76082 557 aa9.13□□□□□ -0.95
APOBEC3B-204ENST00000407298 IFNA4P05014 189 aa9.13□□□□□ -0.95
APOBEC3B-204ENST00000407298 C8orf88P0DMB2 117 aa9.13□□□□□ -0.95
APOBEC3B-204ENST00000407298 DEFA4P12838 97 aa9.13□□□□□ -0.95
APOBEC3B-204ENST00000407298 NAT1P18440 290 aa9.13□□□□□ -0.95
APOBEC3B-204ENST00000407298 PSMB6P28072 239 aa9.13□□□□□ -0.95
APOBEC3B-204ENST00000407298 CBX5P45973 191 aa9.13□□□□□ -0.95
APOBEC3B-204ENST00000407298 MSMO1Q15800 293 aa9.13□□□□□ -0.95
APOBEC3B-204ENST00000407298 LAMTOR1Q6IAA8 161 aa9.13□□□□□ -0.95
APOBEC3B-204ENST00000407298 BTNL8Q6UX41 500 aa9.13□□□□□ -0.95
APOBEC3B-204ENST00000407298 OR5AP2Q8NGF4 316 aa9.13□□□□□ -0.95
APOBEC3B-204ENST00000407298 SECTM1Q8WVN6 248 aa9.13□□□□□ -0.95
APOBEC3B-204ENST00000407298 FYTTD1Q96QD9 318 aaKnown RBP9.13□□□□□ -0.95
APOBEC3B-204ENST00000407298 SPAG8Q99932 426 aaPredicted RBP9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms