RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 CLDND2Q8NHS1 167 aa20.06■□□□□ 0.8
DNMT3A-206ENST00000406659 PCGF1Q9BSM1 259 aa20.06■□□□□ 0.8
DNMT3A-206ENST00000406659 SLC39A9Q9NUM3 307 aa20.06■□□□□ 0.8
DNMT3A-206ENST00000406659 WDR83OSQ9Y284 106 aa20.06■□□□□ 0.8
DNMT3A-206ENST00000406659 NPY1RP25929 384 aa20.05■□□□□ 0.8
DNMT3A-206ENST00000406659 DLK1P80370 383 aa20.05■□□□□ 0.8
DNMT3A-206ENST00000406659 WDR25Q64LD2 544 aaPredicted RBP20.05■□□□□ 0.8
DNMT3A-206ENST00000406659 SLC24A4Q8NFF2 622 aa20.05■□□□□ 0.8
DNMT3A-206ENST00000406659 OR4C13Q8NGP0 309 aa20.05■□□□□ 0.8
DNMT3A-206ENST00000406659 TNFRSF14Q92956 283 aa20.05■□□□□ 0.8
DNMT3A-206ENST00000406659 PLEKHA3Q9HB20 300 aa20.05■□□□□ 0.8
DNMT3A-206ENST00000406659 WASHC3Q9Y3C0 194 aa20.05■□□□□ 0.8
DNMT3A-206ENST00000406659 PRCDQ00LT1 54 aa20.04■□□□□ 0.8
DNMT3A-206ENST00000406659 ICAM4Q14773 271 aa20.04■□□□□ 0.8
DNMT3A-206ENST00000406659 SSX7Q7RTT5 188 aa20.04■□□□□ 0.8
DNMT3A-206ENST00000406659 TMEM170AQ8WVE7 144 aa20.04■□□□□ 0.8
DNMT3A-206ENST00000406659 GNG13Q9P2W3 67 aa20.04■□□□□ 0.8
DNMT3A-206ENST00000406659 TPRP12270 2363 aaKnown RBP20.04■□□□□ 0.8
DNMT3A-206ENST00000406659 TEX50A0A1B0GTY4 177 aa20.03■□□□□ 0.8
DNMT3A-206ENST00000406659 MAP1LC3B2A6NCE7 125 aa20.03■□□□□ 0.8
DNMT3A-206ENST00000406659 RBP4P02753 201 aa20.03■□□□□ 0.8
DNMT3A-206ENST00000406659 RAB13P51153 203 aa20.03■□□□□ 0.8
DNMT3A-206ENST00000406659 RPP25LQ8N5L8 163 aaKnown RBP20.03■□□□□ 0.8
DNMT3A-206ENST00000406659 C8orf46Q8TAG6 207 aa20.03■□□□□ 0.8
DNMT3A-206ENST00000406659 MAP1LC3BQ9GZQ8 125 aa20.03■□□□□ 0.8
DNMT3A-206ENST00000406659 HIVEP3Q5T1R4 2406 aa20.03■□□□□ 0.8
DNMT3A-206ENST00000406659 IGHV2-26A0A0B4J1V2 119 aa20.03■□□□□ 0.8
DNMT3A-206ENST00000406659 PRSS46E5RG02 174 aa20.03■□□□□ 0.8
DNMT3A-206ENST00000406659 CA2P00918 260 aa20.03■□□□□ 0.8
DNMT3A-206ENST00000406659 MC5RP33032 325 aa20.03■□□□□ 0.8
DNMT3A-206ENST00000406659 FGF8P55075 233 aaPredicted RBP20.03■□□□□ 0.8
DNMT3A-206ENST00000406659 SOHLH1Q5JUK2 328 aa20.03■□□□□ 0.8
DNMT3A-206ENST00000406659 TMEM88Q6PEY1 159 aa20.03■□□□□ 0.8
DNMT3A-206ENST00000406659 OR10G4Q8NGN3 311 aa20.03■□□□□ 0.8
DNMT3A-206ENST00000406659 OR10G9Q8NGN4 311 aa20.03■□□□□ 0.8
DNMT3A-206ENST00000406659 OR10G7Q8NGN6 311 aa20.03■□□□□ 0.8
DNMT3A-206ENST00000406659 RXFP4Q8TDU9 374 aa20.03■□□□□ 0.8
DNMT3A-206ENST00000406659 hCG_1809904A0A1W2PP81 198 aa20.02■□□□□ 0.8
DNMT3A-206ENST00000406659 A0A1W2PPE2 198 aa20.02■□□□□ 0.8
DNMT3A-206ENST00000406659 A0A1W2PR64 198 aa20.02■□□□□ 0.8
DNMT3A-206ENST00000406659 A0A1W2PRV1 198 aa20.02■□□□□ 0.8
DNMT3A-206ENST00000406659 MPDU1O75352 247 aa20.02■□□□□ 0.8
DNMT3A-206ENST00000406659 IGKV1D-33P01593 117 aa20.02■□□□□ 0.8
DNMT3A-206ENST00000406659 IGKV1-33P01594 117 aa20.02■□□□□ 0.8
DNMT3A-206ENST00000406659 OPN1MWP04001 364 aa20.02■□□□□ 0.8
DNMT3A-206ENST00000406659 HSPB1P04792 205 aaKnown RBP20.02■□□□□ 0.8
DNMT3A-206ENST00000406659 OPN1MW2P0DN77 364 aa20.02■□□□□ 0.8
DNMT3A-206ENST00000406659 OPN1MW3P0DN78 364 aa20.02■□□□□ 0.8
DNMT3A-206ENST00000406659 KHDC3LQ587J8 217 aa20.02■□□□□ 0.8
DNMT3A-206ENST00000406659 OR5B3Q8NH48 314 aa20.02■□□□□ 0.8
DNMT3A-206ENST00000406659 CLEC7AQ9BXN2 247 aa20.02■□□□□ 0.8
DNMT3A-206ENST00000406659 SRP19P09132 144 aaKnown RBP20.01■□□□□ 0.79
DNMT3A-206ENST00000406659 VSTM2AQ8TAG5 236 aa20.01■□□□□ 0.79
DNMT3A-206ENST00000406659 CHODLQ9H9P2 273 aa20.01■□□□□ 0.79
DNMT3A-206ENST00000406659 UNKLQ9H9P5 680 aaKnown RBP20.01■□□□□ 0.79
DNMT3A-206ENST00000406659 LOC102723971A0A1B0GUV8 181 aa20■□□□□ 0.79
DNMT3A-206ENST00000406659 USF1P22415 310 aaPredicted RBP20■□□□□ 0.79
DNMT3A-206ENST00000406659 ACOT6Q3I5F7 207 aaPredicted RBP20■□□□□ 0.79
DNMT3A-206ENST00000406659 AKIRIN2Q53H80 203 aa20■□□□□ 0.79
DNMT3A-206ENST00000406659 CBLN2Q8IUK8 224 aa20■□□□□ 0.79
DNMT3A-206ENST00000406659 OR4A5Q8NH83 315 aa20■□□□□ 0.79
DNMT3A-206ENST00000406659 FAM122AQ96E09 287 aa20■□□□□ 0.79
DNMT3A-206ENST00000406659 ACTR3CQ9C0K3 210 aaPredicted RBP20■□□□□ 0.79
DNMT3A-206ENST00000406659 MALRD1Q5VYJ5 2156 aa20■□□□□ 0.79
DNMT3A-206ENST00000406659 CTXND1A0A1B0GTU2 59 aa20■□□□□ 0.79
DNMT3A-206ENST00000406659 LIPFP07098 398 aa20■□□□□ 0.79
DNMT3A-206ENST00000406659 RPL8P62917 257 aaKnown RBP20■□□□□ 0.79
DNMT3A-206ENST00000406659 HLA-DRB5Q30154 266 aa20■□□□□ 0.79
DNMT3A-206ENST00000406659 TREML4Q6UXN2 200 aa20■□□□□ 0.79
DNMT3A-206ENST00000406659 COMMD5Q9GZQ3 224 aa20■□□□□ 0.79
DNMT3A-206ENST00000406659 ONECUT1Q9UBC0 465 aa20■□□□□ 0.79
DNMT3A-206ENST00000406659 ZFP92A6NM28 416 aa19.99■□□□□ 0.79
DNMT3A-206ENST00000406659 ENSAO43768 121 aaKnown RBP19.99■□□□□ 0.79
DNMT3A-206ENST00000406659 DLX1P56177 255 aa19.99■□□□□ 0.79
DNMT3A-206ENST00000406659 LY6G5BQ8NDX9 201 aa19.99■□□□□ 0.79
DNMT3A-206ENST00000406659 OR1L8Q8NGR8 309 aa19.99■□□□□ 0.79
DNMT3A-206ENST00000406659 TMEM167AQ8TBQ9 72 aa19.99■□□□□ 0.79
DNMT3A-206ENST00000406659 SLC25A22Q9H936 323 aa19.99■□□□□ 0.79
DNMT3A-206ENST00000406659 UBTD1Q9HAC8 227 aa19.99■□□□□ 0.79
DNMT3A-206ENST00000406659 A0A1W2PPR1 153 aa19.98■□□□□ 0.79
DNMT3A-206ENST00000406659 M0R036 132 aa19.98■□□□□ 0.79
DNMT3A-206ENST00000406659 CYB5BO43169 146 aa19.98■□□□□ 0.79
DNMT3A-206ENST00000406659 SOX15O60248 233 aa19.98■□□□□ 0.79
DNMT3A-206ENST00000406659 IFNA1P01562 189 aa19.98■□□□□ 0.79
DNMT3A-206ENST00000406659 IGLV1-47P01700 117 aa19.98■□□□□ 0.79
DNMT3A-206ENST00000406659 PLA2G5P39877 138 aa19.98■□□□□ 0.79
DNMT3A-206ENST00000406659 CEBPGP53567 150 aa19.98■□□□□ 0.79
DNMT3A-206ENST00000406659 FAM122CQ6P4D5 195 aa19.98■□□□□ 0.79
DNMT3A-206ENST00000406659 PATZ1Q9HBE1 687 aaKnown RBP19.98■□□□□ 0.79
DNMT3A-206ENST00000406659 NPVFQ9HCQ7 196 aa19.98■□□□□ 0.79
DNMT3A-206ENST00000406659 PKD1L2Q7Z442 2459 aa19.98■□□□□ 0.79
DNMT3A-206ENST00000406659 RELNP78509 3460 aa19.98■□□□□ 0.79
DNMT3A-206ENST00000406659 BCL2P10415 239 aa19.98■□□□□ 0.79
DNMT3A-206ENST00000406659 COX7A1P24310 79 aa19.98■□□□□ 0.79
DNMT3A-206ENST00000406659 ATP5IP56385 69 aaPredicted RBP19.98■□□□□ 0.79
DNMT3A-206ENST00000406659 VMA21Q3ZAQ7 101 aa19.98■□□□□ 0.79
DNMT3A-206ENST00000406659 BEND2Q8NDZ0 799 aa19.98■□□□□ 0.79
DNMT3A-206ENST00000406659 FBP1P09467 338 aa19.97■□□□□ 0.79
DNMT3A-206ENST00000406659 PRB3Q04118 309 aaPredicted RBP19.97■□□□□ 0.79
DNMT3A-206ENST00000406659 Q8N7P7 452 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms