RNA–Protein interactions for RNA: ENST00000405271.5

EPCAM-202, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 5 BASIC

Gene EPCAM, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-202ENST00000405271 TRAV3A0A0B4J244 114 aa17.51■□□□□ 0.39
EPCAM-202ENST00000405271 NCBP2LA6PVI3 153 aaKnown RBP17.51■□□□□ 0.39
EPCAM-202ENST00000405271 FGF16O43320 207 aa17.51■□□□□ 0.39
EPCAM-202ENST00000405271 IGHV4-59P01825 116 aa17.51■□□□□ 0.39
EPCAM-202ENST00000405271 MAS1LP35410 378 aa17.51■□□□□ 0.39
EPCAM-202ENST00000405271 NKX2-1P43699 371 aaPredicted RBP17.51■□□□□ 0.39
EPCAM-202ENST00000405271 C5orf64Q2M2E5 130 aa17.51■□□□□ 0.39
EPCAM-202ENST00000405271 FAM71E2Q8N5Q1 922 aa17.51■□□□□ 0.39
EPCAM-202ENST00000405271 Q8N9W7 124 aa17.51■□□□□ 0.39
EPCAM-202ENST00000405271 ZNF257Q9Y2Q1 563 aa17.51■□□□□ 0.39
EPCAM-202ENST00000405271 NSG2Q9Y328 171 aa17.51■□□□□ 0.39
EPCAM-202ENST00000405271 POMT1Q9Y6A1 747 aa17.51■□□□□ 0.39
EPCAM-202ENST00000405271 PFDN1O60925 122 aa17.5■□□□□ 0.39
EPCAM-202ENST00000405271 LY6EQ16553 131 aa17.5■□□□□ 0.39
EPCAM-202ENST00000405271 PRSS8Q16651 343 aa17.5■□□□□ 0.39
EPCAM-202ENST00000405271 RBMS3Q6XE24 437 aaKnown RBP17.5■□□□□ 0.39
EPCAM-202ENST00000405271 TCTE3Q8IZS6 198 aa17.5■□□□□ 0.39
EPCAM-202ENST00000405271 TMEM86BQ8N661 226 aa17.5■□□□□ 0.39
EPCAM-202ENST00000405271 SIGLECL1Q8N7X8 197 aa17.5■□□□□ 0.39
EPCAM-202ENST00000405271 NEURL2Q9BR09 285 aa17.5■□□□□ 0.39
EPCAM-202ENST00000405271 ZNF430Q9H8G1 570 aaPredicted RBP17.5■□□□□ 0.39
EPCAM-202ENST00000405271 VPREB3Q9UKI3 123 aa17.5■□□□□ 0.39
EPCAM-202ENST00000405271 ST8SIA3O43173 380 aa17.49■□□□□ 0.39
EPCAM-202ENST00000405271 SCGB1D2O95969 90 aa17.49■□□□□ 0.39
EPCAM-202ENST00000405271 TMEM219Q86XT9 240 aa17.49■□□□□ 0.39
EPCAM-202ENST00000405271 OR5B3Q8NH48 314 aa17.49■□□□□ 0.39
EPCAM-202ENST00000405271 OR52E5Q8NH55 327 aa17.49■□□□□ 0.39
EPCAM-202ENST00000405271 PPP1R1CQ8WVI7 109 aa17.49■□□□□ 0.39
EPCAM-202ENST00000405271 WDR89Q96FK6 387 aaPredicted RBP17.49■□□□□ 0.39
EPCAM-202ENST00000405271 QTRT1Q9BXR0 403 aaKnown RBP17.49■□□□□ 0.39
EPCAM-202ENST00000405271 HSPB7Q9UBY9 170 aa17.49■□□□□ 0.39
EPCAM-202ENST00000405271 M0QZK8 103 aa17.48■□□□□ 0.39
EPCAM-202ENST00000405271 PET100P0DJ07 73 aa17.48■□□□□ 0.39
EPCAM-202ENST00000405271 ID3Q02535 119 aa17.48■□□□□ 0.39
EPCAM-202ENST00000405271 FGL1Q08830 312 aa17.48■□□□□ 0.39
EPCAM-202ENST00000405271 MRGPRG-AS1Q2M3A8 158 aa17.48■□□□□ 0.39
EPCAM-202ENST00000405271 C5orf56Q8N8D9 126 aa17.48■□□□□ 0.39
EPCAM-202ENST00000405271 OR2T35Q8NGX2 323 aa17.48■□□□□ 0.39
EPCAM-202ENST00000405271 DNHD1Q96M86 4753 aa17.48■□□□□ 0.39
EPCAM-202ENST00000405271 RASL11BQ9BPW5 248 aa17.48■□□□□ 0.39
EPCAM-202ENST00000405271 COMMD5Q9GZQ3 224 aa17.48■□□□□ 0.39
EPCAM-202ENST00000405271 HOXA3O43365 443 aaPredicted RBP17.47■□□□□ 0.39
EPCAM-202ENST00000405271 MED6O75586 246 aa17.47■□□□□ 0.39
EPCAM-202ENST00000405271 ACTL6BO94805 426 aa17.47■□□□□ 0.39
EPCAM-202ENST00000405271 TNFRSF9Q07011 255 aa17.47■□□□□ 0.39
EPCAM-202ENST00000405271 RAB32Q13637 225 aa17.47■□□□□ 0.39
EPCAM-202ENST00000405271 PDLIM3Q53GG5 364 aaPredicted RBP17.47■□□□□ 0.39
EPCAM-202ENST00000405271 OR51B2Q9Y5P1 312 aa17.47■□□□□ 0.39
EPCAM-202ENST00000405271 CA2P00918 260 aa17.47■□□□□ 0.39
EPCAM-202ENST00000405271 HLA-DRB1P01911 266 aa17.47■□□□□ 0.39
EPCAM-202ENST00000405271 MBPP02686 304 aaPredicted RBP17.47■□□□□ 0.39
EPCAM-202ENST00000405271 PSMB6P28072 239 aa17.47■□□□□ 0.39
EPCAM-202ENST00000405271 S100A10P60903 97 aa17.47■□□□□ 0.39
EPCAM-202ENST00000405271 SPCS3P61009 180 aa17.47■□□□□ 0.39
EPCAM-202ENST00000405271 HSPE1P61604 102 aaKnown RBP17.47■□□□□ 0.39
EPCAM-202ENST00000405271 CXorf66Q5JRM2 361 aaPredicted RBP17.47■□□□□ 0.39
EPCAM-202ENST00000405271 K7EPK0 472 aa17.46■□□□□ 0.39
EPCAM-202ENST00000405271 WRBO00258 174 aa17.46■□□□□ 0.39
EPCAM-202ENST00000405271 NXPH3O95157 252 aa17.46■□□□□ 0.39
EPCAM-202ENST00000405271 IFNA17P01571 189 aa17.46■□□□□ 0.39
EPCAM-202ENST00000405271 TNXAQ16473 311 aa17.46■□□□□ 0.39
EPCAM-202ENST00000405271 LRRC37A5PQ49AS3 106 aa17.46■□□□□ 0.39
EPCAM-202ENST00000405271 OR1L8Q8NGR8 309 aa17.46■□□□□ 0.39
EPCAM-202ENST00000405271 CLCC1Q96S66 551 aa17.46■□□□□ 0.39
EPCAM-202ENST00000405271 MPC2O95563 127 aa17.45■□□□□ 0.38
EPCAM-202ENST00000405271 COMPP49747 757 aaPredicted RBP17.45■□□□□ 0.38
EPCAM-202ENST00000405271 PJVKQ0ZLH3 352 aa17.45■□□□□ 0.38
EPCAM-202ENST00000405271 RCL1Q9Y2P8 373 aaKnown RBP17.45■□□□□ 0.38
EPCAM-202ENST00000405271 LSM5Q9Y4Y9 91 aaKnown RBP17.45■□□□□ 0.38
EPCAM-202ENST00000405271 SYNGR2O43760 224 aa17.44■□□□□ 0.38
EPCAM-202ENST00000405271 CHST1O43916 411 aa17.44■□□□□ 0.38
EPCAM-202ENST00000405271 RPL27AP46776 148 aaKnown RBP17.44■□□□□ 0.38
EPCAM-202ENST00000405271 PRCDQ00LT1 54 aa17.44■□□□□ 0.38
EPCAM-202ENST00000405271 STAB1Q9NY15 2570 aa17.44■□□□□ 0.38
EPCAM-202ENST00000405271 TRAV14DV4A0A0A6YYC5 116 aa17.43■□□□□ 0.38
EPCAM-202ENST00000405271 TEX50A0A1B0GTY4 177 aa17.43■□□□□ 0.38
EPCAM-202ENST00000405271 G3V3Q6 166 aa17.43■□□□□ 0.38
EPCAM-202ENST00000405271 LY86O95711 162 aa17.43■□□□□ 0.38
EPCAM-202ENST00000405271 RLN2P04090 185 aa17.43■□□□□ 0.38
EPCAM-202ENST00000405271 POLR2GP62487 172 aaKnown RBP eCLIP17.43■□□□□ 0.38
EPCAM-202ENST00000405271 THAP6Q8TBB0 222 aa17.43■□□□□ 0.38
EPCAM-202ENST00000405271 ZNF418Q8TF45 676 aaPredicted RBP17.43■□□□□ 0.38
EPCAM-202ENST00000405271 RBKSQ9H477 322 aa17.43■□□□□ 0.38
EPCAM-202ENST00000405271 CEBPZOSA8MTT3 80 aa17.42■□□□□ 0.38
EPCAM-202ENST00000405271 FCN1O00602 326 aa17.42■□□□□ 0.38
EPCAM-202ENST00000405271 SSSCA1O60232 199 aa17.42■□□□□ 0.38
EPCAM-202ENST00000405271 DEDDO75618 318 aa17.42■□□□□ 0.38
EPCAM-202ENST00000405271 MYOD1P15172 320 aa17.42■□□□□ 0.38
EPCAM-202ENST00000405271 PVALBP20472 110 aaPredicted RBP17.42■□□□□ 0.38
EPCAM-202ENST00000405271 GNB1P62873 340 aa17.42■□□□□ 0.38
EPCAM-202ENST00000405271 SSBP2P81877 361 aaPredicted RBP17.42■□□□□ 0.38
EPCAM-202ENST00000405271 SRSF2Q01130 221 aaKnown RBP17.42■□□□□ 0.38
EPCAM-202ENST00000405271 CD300CQ08708 224 aa17.42■□□□□ 0.38
EPCAM-202ENST00000405271 PRSS54Q6PEW0 395 aa17.42■□□□□ 0.38
EPCAM-202ENST00000405271 ZNF562Q6V9R5 426 aa17.42■□□□□ 0.38
EPCAM-202ENST00000405271 SRSF12Q8WXF0 261 aaKnown RBP17.42■□□□□ 0.38
EPCAM-202ENST00000405271 TMEM158Q8WZ71 300 aa17.42■□□□□ 0.38
EPCAM-202ENST00000405271 RAB40CQ96S21 281 aa17.42■□□□□ 0.38
EPCAM-202ENST00000405271 MAGT1Q9H0U3 335 aa17.42■□□□□ 0.38
EPCAM-202ENST00000405271 PLEKHA3Q9HB20 300 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms