RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 MCFD2Q8NI22 146 aa1.72□□□□□ -2.13
HMGB1P17-201ENST00000403495 GPR119Q8TDV5 335 aa1.72□□□□□ -2.13
HMGB1P17-201ENST00000403495 ZCCHC13Q8WW36 166 aaKnown RBP1.72□□□□□ -2.13
HMGB1P17-201ENST00000403495 TMEM147Q9BVK8 224 aa1.72□□□□□ -2.13
HMGB1P17-201ENST00000403495 COMMD5Q9GZQ3 224 aa1.72□□□□□ -2.13
HMGB1P17-201ENST00000403495 TMEM222Q9H0R3 208 aa1.72□□□□□ -2.13
HMGB1P17-201ENST00000403495 ARMC1Q9NVT9 282 aa1.72□□□□□ -2.13
HMGB1P17-201ENST00000403495 CHD2O14647 1828 aaKnown RBP1.72□□□□□ -2.13
HMGB1P17-201ENST00000403495 EIF3AQ14152 1382 aaKnown RBP1.72□□□□□ -2.13
HMGB1P17-201ENST00000403495 TRAV26-2A0A0B4J265 109 aa1.71□□□□□ -2.14
HMGB1P17-201ENST00000403495 A0A0J9YX75 114 aa1.71□□□□□ -2.14
HMGB1P17-201ENST00000403495 A0A0J9YY10 115 aa1.71□□□□□ -2.14
HMGB1P17-201ENST00000403495 MDFIC2A0A1B0GVS7 189 aa1.71□□□□□ -2.14
HMGB1P17-201ENST00000403495 A0A1B0GX78 115 aa1.71□□□□□ -2.14
HMGB1P17-201ENST00000403495 hADV38S2A0JD32 116 aa1.71□□□□□ -2.14
HMGB1P17-201ENST00000403495 FAM159BA6NKW6 160 aa1.71□□□□□ -2.14
HMGB1P17-201ENST00000403495 NDUFB2O95178 105 aa1.71□□□□□ -2.14
HMGB1P17-201ENST00000403495 IGHV1-69P01742 117 aa1.71□□□□□ -2.14
HMGB1P17-201ENST00000403495 CD200P41217 278 aa1.71□□□□□ -2.14
HMGB1P17-201ENST00000403495 RAB13P51153 203 aa1.71□□□□□ -2.14
HMGB1P17-201ENST00000403495 TAS2R30P59541 319 aa1.71□□□□□ -2.14
HMGB1P17-201ENST00000403495 RPS20P60866 119 aaKnown RBP1.71□□□□□ -2.14
HMGB1P17-201ENST00000403495 POLR2GP62487 172 aaKnown RBP eCLIP1.71□□□□□ -2.14
HMGB1P17-201ENST00000403495 IAH1Q2TAA2 248 aaPredicted RBP1.71□□□□□ -2.14
HMGB1P17-201ENST00000403495 Q6ZS49 121 aa1.71□□□□□ -2.14
HMGB1P17-201ENST00000403495 SLC36A1Q7Z2H8 476 aa1.71□□□□□ -2.14
HMGB1P17-201ENST00000403495 TMED4Q7Z7H5 227 aa1.71□□□□□ -2.14
HMGB1P17-201ENST00000403495 OOSP2Q86WS3 158 aa1.71□□□□□ -2.14
HMGB1P17-201ENST00000403495 OR52L1Q8NGH7 329 aa1.71□□□□□ -2.14
HMGB1P17-201ENST00000403495 TSPAN32Q96QS1 320 aa1.71□□□□□ -2.14
HMGB1P17-201ENST00000403495 PRRT1Q99946 306 aa1.71□□□□□ -2.14
HMGB1P17-201ENST00000403495 MIEN1Q9BRT3 115 aa1.71□□□□□ -2.14
HMGB1P17-201ENST00000403495 RNASE7Q9H1E1 156 aaKnown RBP1.71□□□□□ -2.14
HMGB1P17-201ENST00000403495 TUBA4BQ9H853 241 aa1.71□□□□□ -2.14
HMGB1P17-201ENST00000403495 C14orf105Q9NVL8 296 aa1.71□□□□□ -2.14
HMGB1P17-201ENST00000403495 GID8Q9NWU2 228 aa1.71□□□□□ -2.14
HMGB1P17-201ENST00000403495 PAQR5Q9NXK6 330 aaPredicted RBP1.71□□□□□ -2.14
HMGB1P17-201ENST00000403495 OPTCQ9UBM4 332 aa1.71□□□□□ -2.14
HMGB1P17-201ENST00000403495 RSL24D1Q9UHA3 163 aaKnown RBP1.71□□□□□ -2.14
HMGB1P17-201ENST00000403495 V9GYQ6 96 aa1.71□□□□□ -2.14
HMGB1P17-201ENST00000403495 ZNF532Q9HCE3 1301 aa1.7□□□□□ -2.14
HMGB1P17-201ENST00000403495 CAMSAP1Q5T5Y3 1602 aa1.7□□□□□ -2.14
HMGB1P17-201ENST00000403495 TRBV20OR9-2A0A075B6H5 130 aa1.7□□□□□ -2.14
HMGB1P17-201ENST00000403495 TMEM269A0A1B0GVZ9 245 aa1.7□□□□□ -2.14
HMGB1P17-201ENST00000403495 OR5K4A6NMS3 321 aa1.7□□□□□ -2.14
HMGB1P17-201ENST00000403495 I3L521 148 aa1.7□□□□□ -2.14
HMGB1P17-201ENST00000403495 PIRO00625 290 aa1.7□□□□□ -2.14
HMGB1P17-201ENST00000403495 SRP19P09132 144 aaKnown RBP1.7□□□□□ -2.14
HMGB1P17-201ENST00000403495 BLVRBP30043 206 aaPredicted RBP1.7□□□□□ -2.14
HMGB1P17-201ENST00000403495 CSN1S1P47710 185 aa1.7□□□□□ -2.14
HMGB1P17-201ENST00000403495 RBM11P57052 281 aaKnown RBP1.7□□□□□ -2.14
HMGB1P17-201ENST00000403495 RWDD2BP57060 319 aa1.7□□□□□ -2.14
HMGB1P17-201ENST00000403495 TAS2R20P59543 309 aa1.7□□□□□ -2.14
HMGB1P17-201ENST00000403495 RPL30P62888 115 aaKnown RBP1.7□□□□□ -2.14
HMGB1P17-201ENST00000403495 DR1Q01658 176 aa1.7□□□□□ -2.14
HMGB1P17-201ENST00000403495 POU6F1Q14863 301 aa1.7□□□□□ -2.14
HMGB1P17-201ENST00000403495 TEX36Q5VZQ5 186 aa1.7□□□□□ -2.14
HMGB1P17-201ENST00000403495 SSX8Q7RTT4 187 aa1.7□□□□□ -2.14
HMGB1P17-201ENST00000403495 KMT2EQ8IZD2 1858 aa1.7□□□□□ -2.14
HMGB1P17-201ENST00000403495 GDPD1Q8N9F7 314 aa1.7□□□□□ -2.14
HMGB1P17-201ENST00000403495 MRPL30Q8TCC3 161 aaKnown RBP1.7□□□□□ -2.14
HMGB1P17-201ENST00000403495 CT55Q8WUE5 264 aa1.7□□□□□ -2.14
HMGB1P17-201ENST00000403495 ACOT12Q8WYK0 555 aa1.7□□□□□ -2.14
HMGB1P17-201ENST00000403495 ERMAPQ96PL5 475 aaPredicted RBP1.7□□□□□ -2.14
HMGB1P17-201ENST00000403495 KLF6Q99612 283 aaPredicted RBP1.7□□□□□ -2.14
HMGB1P17-201ENST00000403495 TTTY13Q9BZ97 58 aa1.7□□□□□ -2.14
HMGB1P17-201ENST00000403495 WDR61Q9GZS3 305 aaKnown RBP1.7□□□□□ -2.14
HMGB1P17-201ENST00000403495 UNC13AQ9UPW8 1703 aa1.7□□□□□ -2.14
HMGB1P17-201ENST00000403495 TMEM56-RWDD3S4R434 201 aa1.7□□□□□ -2.14
HMGB1P17-201ENST00000403495 NUP155O75694 1391 aa1.7□□□□□ -2.14
HMGB1P17-201ENST00000403495 ABCC12Q96J65 1359 aa1.7□□□□□ -2.14
HMGB1P17-201ENST00000403495 NUP160Q12769 1436 aa1.69□□□□□ -2.14
HMGB1P17-201ENST00000403495 LTBP2Q14767 1821 aa1.69□□□□□ -2.14
HMGB1P17-201ENST00000403495 ODF3BA8MYP8 253 aa1.69□□□□□ -2.14
HMGB1P17-201ENST00000403495 TXNDC9O14530 226 aa1.69□□□□□ -2.14
HMGB1P17-201ENST00000403495 NPYP01303 97 aa1.69□□□□□ -2.14
HMGB1P17-201ENST00000403495 SERPINE1P05121 402 aa1.69□□□□□ -2.14
HMGB1P17-201ENST00000403495 FABP1P07148 127 aa1.69□□□□□ -2.14
HMGB1P17-201ENST00000403495 GZMBP10144 247 aa1.69□□□□□ -2.14
HMGB1P17-201ENST00000403495 CYBAP13498 195 aa1.69□□□□□ -2.14
HMGB1P17-201ENST00000403495 CSRP1P21291 193 aaKnown RBP1.69□□□□□ -2.14
HMGB1P17-201ENST00000403495 S100A7P31151 101 aa1.69□□□□□ -2.14
HMGB1P17-201ENST00000403495 FXYD7P58549 80 aa1.69□□□□□ -2.14
HMGB1P17-201ENST00000403495 ARHGAP11BQ3KRB8 267 aa1.69□□□□□ -2.14
HMGB1P17-201ENST00000403495 C2orf91Q6ZV80 131 aa1.69□□□□□ -2.14
HMGB1P17-201ENST00000403495 LYG2Q86SG7 212 aa1.69□□□□□ -2.14
HMGB1P17-201ENST00000403495 ZNF283Q8N7M2 679 aa1.69□□□□□ -2.14
HMGB1P17-201ENST00000403495 NEK7Q8TDX7 302 aa1.69□□□□□ -2.14
HMGB1P17-201ENST00000403495 EFCAB1Q9HAE3 211 aa1.69□□□□□ -2.14
HMGB1P17-201ENST00000403495 UQCC1Q9NVA1 299 aa1.69□□□□□ -2.14
HMGB1P17-201ENST00000403495 CCL26Q9Y258 94 aa1.69□□□□□ -2.14
HMGB1P17-201ENST00000403495 RTL1A6NKG5 1358 aa1.69□□□□□ -2.14
HMGB1P17-201ENST00000403495 HECW2Q9P2P5 1572 aa1.68□□□□□ -2.14
HMGB1P17-201ENST00000403495 ATAD5Q96QE3 1844 aa1.68□□□□□ -2.14
HMGB1P17-201ENST00000403495 EXOC1LA0A1B0GW35 172 aa1.68□□□□□ -2.14
HMGB1P17-201ENST00000403495 TMEM235A6NFC5 223 aa1.68□□□□□ -2.14
HMGB1P17-201ENST00000403495 H3BPC8 53 aa1.68□□□□□ -2.14
HMGB1P17-201ENST00000403495 PGRMC1O00264 195 aaKnown RBP1.68□□□□□ -2.14
HMGB1P17-201ENST00000403495 KLRC4O43908 158 aa1.68□□□□□ -2.14
HMGB1P17-201ENST00000403495 OR4E1P0C645 316 aa1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms