RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 F2Z2F3 143 aa7.42□□□□□ -1.22
CACNA1C-220ENST00000399655 CDIPTO14735 213 aa7.42□□□□□ -1.22
CACNA1C-220ENST00000399655 SLC16A11Q8NCK7 471 aa7.42□□□□□ -1.22
CACNA1C-220ENST00000399655 UBR2Q8IWV8 1755 aa7.41□□□□□ -1.22
CACNA1C-220ENST00000399655 RNF7Q9UBF6 113 aa7.41□□□□□ -1.22
CACNA1C-220ENST00000399655 NDUFB1O75438 58 aa7.41□□□□□ -1.22
CACNA1C-220ENST00000399655 PRR35P0CG20 571 aa7.41□□□□□ -1.22
CACNA1C-220ENST00000399655 CDKN1AP38936 164 aa7.41□□□□□ -1.22
CACNA1C-220ENST00000399655 HTR6P50406 440 aa7.41□□□□□ -1.22
CACNA1C-220ENST00000399655 CLDN2P57739 230 aa7.41□□□□□ -1.22
CACNA1C-220ENST00000399655 THSD4Q6ZMP0 1018 aa7.41□□□□□ -1.22
CACNA1C-220ENST00000399655 ZNF645Q8N7E2 425 aa7.41□□□□□ -1.22
CACNA1C-220ENST00000399655 GRIFINA4D1Z8 144 aa7.41□□□□□ -1.22
CACNA1C-220ENST00000399655 SMIM18P0DKX4 95 aa7.41□□□□□ -1.22
CACNA1C-220ENST00000399655 Q6ZS52 159 aa7.41□□□□□ -1.22
CACNA1C-220ENST00000399655 CLEC4DQ8WXI8 215 aa7.41□□□□□ -1.22
CACNA1C-220ENST00000399655 A0A087WUJ7 227 aa7.41□□□□□ -1.22
CACNA1C-220ENST00000399655 MOSP00540 346 aa7.41□□□□□ -1.22
CACNA1C-220ENST00000399655 F8W1H4 67 aa7.41□□□□□ -1.22
CACNA1C-220ENST00000399655 TXNRD3NBQ6F5E7 133 aa7.41□□□□□ -1.22
CACNA1C-220ENST00000399655 TRAV24A0A0B4J272 114 aa7.41□□□□□ -1.22
CACNA1C-220ENST00000399655 SELENOPP49908 381 aa7.41□□□□□ -1.22
CACNA1C-220ENST00000399655 MIXL1Q9H2W2 232 aa7.41□□□□□ -1.22
CACNA1C-220ENST00000399655 A0A0G2JLL6 359 aaPredicted RBP7.41□□□□□ -1.22
CACNA1C-220ENST00000399655 FAM72CH0Y354 149 aa7.41□□□□□ -1.22
CACNA1C-220ENST00000399655 ICOSLGO75144 302 aa7.41□□□□□ -1.22
CACNA1C-220ENST00000399655 PROP1O75360 226 aa7.41□□□□□ -1.22
CACNA1C-220ENST00000399655 CD70P32970 193 aa7.41□□□□□ -1.22
CACNA1C-220ENST00000399655 FAM72DQ6L9T8 149 aa7.41□□□□□ -1.22
CACNA1C-220ENST00000399655 PRRT2Q7Z6L0 340 aaPredicted RBP7.41□□□□□ -1.22
CACNA1C-220ENST00000399655 OR11G2Q8NGC1 345 aa7.41□□□□□ -1.22
CACNA1C-220ENST00000399655 TMEM174Q8WUU8 243 aa7.41□□□□□ -1.22
CACNA1C-220ENST00000399655 TEX48A0A1B0GUV7 120 aa7.4□□□□□ -1.22
CACNA1C-220ENST00000399655 RNF225M0QZC1 329 aaPredicted RBP7.4□□□□□ -1.22
CACNA1C-220ENST00000399655 COX20Q5RI15 118 aa7.4□□□□□ -1.22
CACNA1C-220ENST00000399655 TEX43Q6ZNM6 134 aa7.4□□□□□ -1.22
CACNA1C-220ENST00000399655 IGHV3-43A0A0B4J1X8 118 aa7.4□□□□□ -1.22
CACNA1C-220ENST00000399655 IGHV3-43DP0DP04 118 aa7.4□□□□□ -1.22
CACNA1C-220ENST00000399655 FER1L6-AS1Q8NA97 138 aa7.4□□□□□ -1.22
CACNA1C-220ENST00000399655 TMEM243Q9BU79 118 aa7.4□□□□□ -1.22
CACNA1C-220ENST00000399655 TRGV4A0A0C4DH28 118 aa7.4□□□□□ -1.22
CACNA1C-220ENST00000399655 HAX1O00165 279 aa7.4□□□□□ -1.22
CACNA1C-220ENST00000399655 PSG1P11464 419 aa7.4□□□□□ -1.22
CACNA1C-220ENST00000399655 UBE2AP49459 152 aa7.4□□□□□ -1.22
CACNA1C-220ENST00000399655 KLF17Q5JT82 389 aaPredicted RBP7.4□□□□□ -1.22
CACNA1C-220ENST00000399655 SIT1Q9Y3P8 196 aa7.4□□□□□ -1.22
CACNA1C-220ENST00000399655 E9PCH4 1651 aa7.4□□□□□ -1.22
CACNA1C-220ENST00000399655 DLEU1O43261 78 aa7.4□□□□□ -1.22
CACNA1C-220ENST00000399655 WNT1P04628 370 aa7.4□□□□□ -1.22
CACNA1C-220ENST00000399655 C9orf62Q8N4C0 152 aa7.4□□□□□ -1.22
CACNA1C-220ENST00000399655 F6UB75 175 aa7.4□□□□□ -1.22
CACNA1C-220ENST00000399655 FAM90A2PQ658T7 463 aa7.4□□□□□ -1.22
CACNA1C-220ENST00000399655 LINC00305Q7Z4B0 112 aa7.4□□□□□ -1.22
CACNA1C-220ENST00000399655 BCL9O00512 1426 aa7.4□□□□□ -1.22
CACNA1C-220ENST00000399655 IZUMO1RA6ND01 250 aa7.4□□□□□ -1.22
CACNA1C-220ENST00000399655 FAM72BQ86X60 149 aa7.4□□□□□ -1.22
CACNA1C-220ENST00000399655 THAP8Q8NA92 274 aa7.4□□□□□ -1.22
CACNA1C-220ENST00000399655 ST6GALNAC3Q8NDV1 305 aa7.4□□□□□ -1.22
CACNA1C-220ENST00000399655 C16orf52Q8NHV5 167 aa7.4□□□□□ -1.22
CACNA1C-220ENST00000399655 RNF166Q96A37 237 aaPredicted RBP7.4□□□□□ -1.22
CACNA1C-220ENST00000399655 DUSP15Q9H1R2 295 aaPredicted RBP7.4□□□□□ -1.22
CACNA1C-220ENST00000399655 HMGN4O00479 90 aa7.4□□□□□ -1.22
CACNA1C-220ENST00000399655 FOXG1P55316 489 aaPredicted RBP7.4□□□□□ -1.22
CACNA1C-220ENST00000399655 JMJD8Q96S16 334 aa7.4□□□□□ -1.22
CACNA1C-220ENST00000399655 GCSAMQ8N6F7 178 aa7.4□□□□□ -1.23
CACNA1C-220ENST00000399655 A0A1W2PR80 420 aa7.4□□□□□ -1.23
CACNA1C-220ENST00000399655 SYNJ2BPP57105 145 aa7.4□□□□□ -1.23
CACNA1C-220ENST00000399655 LPAL2Q16609 132 aa7.4□□□□□ -1.23
CACNA1C-220ENST00000399655 INO80CQ6PI98 192 aaPredicted RBP7.4□□□□□ -1.23
CACNA1C-220ENST00000399655 BOD1L2Q8IYS8 172 aa7.4□□□□□ -1.23
CACNA1C-220ENST00000399655 CHCHD5Q9BSY4 110 aa7.4□□□□□ -1.23
CACNA1C-220ENST00000399655 IL36BQ9NZH7 164 aa7.4□□□□□ -1.23
CACNA1C-220ENST00000399655 HILPDAQ9Y5L2 63 aa7.4□□□□□ -1.23
CACNA1C-220ENST00000399655 A0A087WWC5 75 aa7.4□□□□□ -1.23
CACNA1C-220ENST00000399655 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.4□□□□□ -1.23
CACNA1C-220ENST00000399655 BCL2L10Q9HD36 194 aa7.4□□□□□ -1.23
CACNA1C-220ENST00000399655 HAMPP81172 84 aa7.4□□□□□ -1.23
CACNA1C-220ENST00000399655 CD69Q07108 199 aa7.4□□□□□ -1.23
CACNA1C-220ENST00000399655 PHIPQ8WWQ0 1821 aa7.39□□□□□ -1.23
CACNA1C-220ENST00000399655 ID3Q02535 119 aa7.39□□□□□ -1.23
CACNA1C-220ENST00000399655 GDF15Q99988 308 aa7.39□□□□□ -1.23
CACNA1C-220ENST00000399655 TRAV8-3A0A0A6YYJ7 113 aa7.39□□□□□ -1.23
CACNA1C-220ENST00000399655 ATOX1O00244 68 aa7.39□□□□□ -1.23
CACNA1C-220ENST00000399655 WBP1LQ9NX94 342 aa7.39□□□□□ -1.23
CACNA1C-220ENST00000399655 HLA-DQB1P01920 261 aa7.39□□□□□ -1.23
CACNA1C-220ENST00000399655 PLPPR2Q96GM1 343 aa7.39□□□□□ -1.23
CACNA1C-220ENST00000399655 NKX2-6A6NCS4 301 aa7.39□□□□□ -1.23
CACNA1C-220ENST00000399655 SLC25A35Q3KQZ1 300 aa7.39□□□□□ -1.23
CACNA1C-220ENST00000399655 YPEL1O60688 119 aa7.39□□□□□ -1.23
CACNA1C-220ENST00000399655 C1orf162Q8NEQ5 155 aaPredicted RBP7.39□□□□□ -1.23
CACNA1C-220ENST00000399655 SPTSSBQ8NFR3 76 aa7.39□□□□□ -1.23
CACNA1C-220ENST00000399655 OR11H6Q8NGC7 330 aa7.39□□□□□ -1.23
CACNA1C-220ENST00000399655 A0A1W2PNR3 127 aa7.39□□□□□ -1.23
CACNA1C-220ENST00000399655 D6R8Y8 96 aa7.39□□□□□ -1.23
CACNA1C-220ENST00000399655 MUSTN1Q8IVN3 82 aa7.39□□□□□ -1.23
CACNA1C-220ENST00000399655 AQP3Q92482 292 aa7.39□□□□□ -1.23
CACNA1C-220ENST00000399655 SRFP11831 508 aa7.39□□□□□ -1.23
CACNA1C-220ENST00000399655 RHNO1Q9BSD3 238 aa7.39□□□□□ -1.23
CACNA1C-220ENST00000399655 SLIRPQ9GZT3 109 aaKnown RBP7.39□□□□□ -1.23
CACNA1C-220ENST00000399655 ACYP1P07311 99 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms