RNA–Protein interactions for RNA: ENST00000399601.5

CACNA1C-208, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-208ENST00000399601 SURF2Q15527 256 aaPredicted RBP9.51□□□□□ -0.89
CACNA1C-208ENST00000399601 SP5Q6BEB4 398 aaPredicted RBP9.51□□□□□ -0.89
CACNA1C-208ENST00000399601 LINC00518Q8N0U6 118 aa9.51□□□□□ -0.89
CACNA1C-208ENST00000399601 NEU3Q9UQ49 428 aa9.51□□□□□ -0.89
CACNA1C-208ENST00000399601 DSPPQ9NZW4 1301 aa9.51□□□□□ -0.89
CACNA1C-208ENST00000399601 CXorf51AA0A1B0GTR3 108 aa9.51□□□□□ -0.89
CACNA1C-208ENST00000399601 E9PQ18 207 aa9.51□□□□□ -0.89
CACNA1C-208ENST00000399601 ERVK11-1P61568 191 aa9.51□□□□□ -0.89
CACNA1C-208ENST00000399601 PAPPA-AS1Q5QFB9 102 aa9.51□□□□□ -0.89
CACNA1C-208ENST00000399601 SYS1Q8N2H4 156 aa9.51□□□□□ -0.89
CACNA1C-208ENST00000399601 RNASE6Q93091 150 aaKnown RBP9.51□□□□□ -0.89
CACNA1C-208ENST00000399601 LINC00305Q7Z4B0 112 aa9.51□□□□□ -0.89
CACNA1C-208ENST00000399601 A0A1W2PPI3 338 aa9.5□□□□□ -0.89
CACNA1C-208ENST00000399601 ZAR1LA6NP61 321 aa9.5□□□□□ -0.89
CACNA1C-208ENST00000399601 ZG16O60844 167 aa9.5□□□□□ -0.89
CACNA1C-208ENST00000399601 LDLRAD2Q5SZI1 272 aa9.5□□□□□ -0.89
CACNA1C-208ENST00000399601 FAM57AQ8TBR7 257 aa9.5□□□□□ -0.89
CACNA1C-208ENST00000399601 SNHG12Q9BXW3 62 aa9.5□□□□□ -0.89
CACNA1C-208ENST00000399601 ANKRD39Q53RE8 183 aa9.5□□□□□ -0.89
CACNA1C-208ENST00000399601 C9orf153Q5TBE3 101 aa9.5□□□□□ -0.89
CACNA1C-208ENST00000399601 A0A1W2PQF6 199 aa9.5□□□□□ -0.89
CACNA1C-208ENST00000399601 FAM74A7A6NL05 159 aa9.5□□□□□ -0.89
CACNA1C-208ENST00000399601 PPYP01298 95 aa9.5□□□□□ -0.89
CACNA1C-208ENST00000399601 IL11P20809 199 aa9.5□□□□□ -0.89
CACNA1C-208ENST00000399601 SSBP2P81877 361 aaPredicted RBP9.5□□□□□ -0.89
CACNA1C-208ENST00000399601 TMEM174Q8WUU8 243 aa9.5□□□□□ -0.89
CACNA1C-208ENST00000399601 TMEM45BQ96B21 275 aa9.5□□□□□ -0.89
CACNA1C-208ENST00000399601 CALYQ9NYX4 217 aa9.5□□□□□ -0.89
CACNA1C-208ENST00000399601 GHRHP01286 108 aa9.5□□□□□ -0.89
CACNA1C-208ENST00000399601 RAG2P55895 527 aa9.5□□□□□ -0.89
CACNA1C-208ENST00000399601 SLC25A45Q8N413 288 aa9.5□□□□□ -0.89
CACNA1C-208ENST00000399601 OR52E5Q8NH55 327 aa9.5□□□□□ -0.89
CACNA1C-208ENST00000399601 SCRT1Q9BWW7 348 aa9.5□□□□□ -0.89
CACNA1C-208ENST00000399601 CD300EQ496F6 205 aaPredicted RBP9.5□□□□□ -0.89
CACNA1C-208ENST00000399601 TCF23Q7RTU1 214 aa9.5□□□□□ -0.89
CACNA1C-208ENST00000399601 NPCDR1Q9BY65 106 aa9.5□□□□□ -0.89
CACNA1C-208ENST00000399601 IDI2-AS1Q9NZ38 188 aa9.5□□□□□ -0.89
CACNA1C-208ENST00000399601 CHTOPQ9Y3Y2 248 aaKnown RBP9.5□□□□□ -0.89
CACNA1C-208ENST00000399601 NPIPB8E9PQR5 432 aa9.49□□□□□ -0.89
CACNA1C-208ENST00000399601 NPIPB9F8W1W9 429 aa9.49□□□□□ -0.89
CACNA1C-208ENST00000399601 NPIPB7O75200 414 aa9.49□□□□□ -0.89
CACNA1C-208ENST00000399601 OR13A1Q8NGR1 328 aa9.49□□□□□ -0.89
CACNA1C-208ENST00000399601 GPR132Q9UNW8 380 aa9.49□□□□□ -0.89
CACNA1C-208ENST00000399601 FOXA2Q9Y261 457 aaPredicted RBP9.49□□□□□ -0.89
CACNA1C-208ENST00000399601 DUTP33316 252 aaKnown RBP9.49□□□□□ -0.89
CACNA1C-208ENST00000399601 ZNF826PQ6ZT77 177 aa9.49□□□□□ -0.89
CACNA1C-208ENST00000399601 ASB10Q8WXI3 467 aa9.49□□□□□ -0.89
CACNA1C-208ENST00000399601 TRAV1-2A0A0B4J238 106 aa9.49□□□□□ -0.89
CACNA1C-208ENST00000399601 ZP4Q12836 540 aa9.49□□□□□ -0.89
CACNA1C-208ENST00000399601 NEUROG1Q92886 237 aa9.49□□□□□ -0.89
CACNA1C-208ENST00000399601 DPRXA6NFQ7 191 aa9.49□□□□□ -0.89
CACNA1C-208ENST00000399601 IFI27P40305 119 aaPredicted RBP9.49□□□□□ -0.89
CACNA1C-208ENST00000399601 MAVSQ7Z434 540 aa9.49□□□□□ -0.89
CACNA1C-208ENST00000399601 ZNF501Q96CX3 271 aaPredicted RBP9.49□□□□□ -0.89
CACNA1C-208ENST00000399601 SH3BGRL3Q9H299 93 aa9.49□□□□□ -0.89
CACNA1C-208ENST00000399601 SLC17A3O00476 420 aa9.49□□□□□ -0.89
CACNA1C-208ENST00000399601 ZNF883P0CG24 379 aa9.49□□□□□ -0.89
CACNA1C-208ENST00000399601 CCL1P22362 96 aa9.49□□□□□ -0.89
CACNA1C-208ENST00000399601 FOXL2P58012 376 aa9.49□□□□□ -0.89
CACNA1C-208ENST00000399601 LINC01555Q8NAE3 123 aa9.49□□□□□ -0.89
CACNA1C-208ENST00000399601 NFAM1Q8NET5 270 aaPredicted RBP9.49□□□□□ -0.89
CACNA1C-208ENST00000399601 NHSQ6T4R5 1651 aa9.49□□□□□ -0.89
CACNA1C-208ENST00000399601 A8MWV9 139 aa9.48□□□□□ -0.89
CACNA1C-208ENST00000399601 KLHDC2Q9Y2U9 406 aa9.48□□□□□ -0.89
CACNA1C-208ENST00000399601 NRXN3Q9Y4C0 1643 aa9.48□□□□□ -0.89
CACNA1C-208ENST00000399601 J3QT63 122 aa9.48□□□□□ -0.89
CACNA1C-208ENST00000399601 OGG1O15527 345 aa9.48□□□□□ -0.89
CACNA1C-208ENST00000399601 ZNF257Q9Y2Q1 563 aa9.48□□□□□ -0.89
CACNA1C-208ENST00000399601 SAP30O75446 220 aa9.48□□□□□ -0.89
CACNA1C-208ENST00000399601 FAM27E3Q08E93 113 aa9.48□□□□□ -0.89
CACNA1C-208ENST00000399601 COLCA1Q6ZS62 124 aa9.48□□□□□ -0.89
CACNA1C-208ENST00000399601 OR11H4Q8NGC9 324 aa9.48□□□□□ -0.89
CACNA1C-208ENST00000399601 OR51G1Q8NGK1 321 aa9.48□□□□□ -0.89
CACNA1C-208ENST00000399601 ZNF275Q9NSD4 429 aaPredicted RBP9.48□□□□□ -0.89
CACNA1C-208ENST00000399601 THAP8Q8NA92 274 aa9.48□□□□□ -0.89
CACNA1C-208ENST00000399601 NPIPB3Q92617 1050 aa9.48□□□□□ -0.89
CACNA1C-208ENST00000399601 ST20Q9HBF5 79 aa9.48□□□□□ -0.89
CACNA1C-208ENST00000399601 CRIM1Q9NZV1 1036 aa9.48□□□□□ -0.89
CACNA1C-208ENST00000399601 TRAV9-2A0A087WT02 112 aa9.48□□□□□ -0.89
CACNA1C-208ENST00000399601 LOC102723996A0A087X1L8 192 aa9.48□□□□□ -0.89
CACNA1C-208ENST00000399601 LIPT2A6NK58 231 aa9.48□□□□□ -0.89
CACNA1C-208ENST00000399601 ORMDL2Q53FV1 153 aa9.48□□□□□ -0.89
CACNA1C-208ENST00000399601 OR5P3Q8WZ94 311 aa9.48□□□□□ -0.89
CACNA1C-208ENST00000399601 ZNF831Q5JPB2 1677 aa9.48□□□□□ -0.89
CACNA1C-208ENST00000399601 H0YL77 283 aa9.48□□□□□ -0.89
CACNA1C-208ENST00000399601 APCDD1LQ8NCL9 501 aa9.48□□□□□ -0.89
CACNA1C-208ENST00000399601 C21orf62Q9NYP8 219 aa9.48□□□□□ -0.89
CACNA1C-208ENST00000399601 C1QL1O75973 258 aa9.47□□□□□ -0.89
CACNA1C-208ENST00000399601 BCL2P10415 239 aa9.47□□□□□ -0.89
CACNA1C-208ENST00000399601 HOXB1P14653 301 aaPredicted RBP9.47□□□□□ -0.89
CACNA1C-208ENST00000399601 ZNF250P15622 560 aa9.47□□□□□ -0.89
CACNA1C-208ENST00000399601 TMEM258P61165 79 aa9.47□□□□□ -0.89
CACNA1C-208ENST00000399601 ABHD12Q8N2K0 398 aa9.47□□□□□ -0.89
CACNA1C-208ENST00000399601 ZNRF1Q8ND25 227 aa9.47□□□□□ -0.89
CACNA1C-208ENST00000399601 WDR34Q96EX3 536 aa9.47□□□□□ -0.89
CACNA1C-208ENST00000399601 NRAPQ86VF7 1730 aa9.47□□□□□ -0.89
CACNA1C-208ENST00000399601 MARS2Q96GW9 593 aaKnown RBP9.47□□□□□ -0.89
CACNA1C-208ENST00000399601 BCL2L10Q9HD36 194 aa9.47□□□□□ -0.89
CACNA1C-208ENST00000399601 AKAP11Q9UKA4 1901 aa9.47□□□□□ -0.89
CACNA1C-208ENST00000399601 A0A0G2JLM5 398 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms