RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 DUSP18Q8NEJ0 188 aa9.73□□□□□ -0.85
HLA-DQB1-203ENST00000399082 SGMS2Q8NHU3 365 aa9.73□□□□□ -0.85
HLA-DQB1-203ENST00000399082 GRPEL2Q8TAA5 225 aa9.73□□□□□ -0.85
HLA-DQB1-203ENST00000399082 SRSF12Q8WXF0 261 aaKnown RBP9.73□□□□□ -0.85
HLA-DQB1-203ENST00000399082 C9orf170A2RU37 121 aa9.72□□□□□ -0.85
HLA-DQB1-203ENST00000399082 FGF2P09038 288 aa9.72□□□□□ -0.85
HLA-DQB1-203ENST00000399082 CD28P10747 220 aa9.72□□□□□ -0.85
HLA-DQB1-203ENST00000399082 VAMP1P23763 118 aa9.72□□□□□ -0.85
HLA-DQB1-203ENST00000399082 OR2B8PP59922 312 aa9.72□□□□□ -0.85
HLA-DQB1-203ENST00000399082 DHRS2Q13268 280 aa9.72□□□□□ -0.85
HLA-DQB1-203ENST00000399082 ECSCRQ19T08 205 aa9.72□□□□□ -0.85
HLA-DQB1-203ENST00000399082 C12orf54Q6X4T0 127 aa9.72□□□□□ -0.85
HLA-DQB1-203ENST00000399082 LRTM2Q8N967 370 aa9.72□□□□□ -0.85
HLA-DQB1-203ENST00000399082 MINDY2Q8NBR6 621 aa9.72□□□□□ -0.85
HLA-DQB1-203ENST00000399082 LFNGQ8NES3 379 aa9.72□□□□□ -0.85
HLA-DQB1-203ENST00000399082 OR52B4Q8NGK2 314 aa9.72□□□□□ -0.85
HLA-DQB1-203ENST00000399082 CHPT1Q8WUD6 406 aa9.72□□□□□ -0.85
HLA-DQB1-203ENST00000399082 RBPMSQ93062 196 aaKnown RBP9.72□□□□□ -0.85
HLA-DQB1-203ENST00000399082 IL22RA2Q969J5 263 aa9.72□□□□□ -0.85
HLA-DQB1-203ENST00000399082 CITED1Q99966 193 aa9.72□□□□□ -0.85
HLA-DQB1-203ENST00000399082 AIFM2Q9BRQ8 373 aa9.72□□□□□ -0.85
HLA-DQB1-203ENST00000399082 ZNF747Q9BV97 191 aa9.72□□□□□ -0.85
HLA-DQB1-203ENST00000399082 ALX4Q9H161 411 aaPredicted RBP9.72□□□□□ -0.85
HLA-DQB1-203ENST00000399082 KCNIP3Q9Y2W7 256 aa9.72□□□□□ -0.85
HLA-DQB1-203ENST00000399082 TRAV41A0A0B4J266 112 aa9.71□□□□□ -0.86
HLA-DQB1-203ENST00000399082 A0A0B4J293 547 aa9.71□□□□□ -0.86
HLA-DQB1-203ENST00000399082 PSMB11A5LHX3 300 aa9.71□□□□□ -0.86
HLA-DQB1-203ENST00000399082 HMX3A6NHT5 357 aa9.71□□□□□ -0.86
HLA-DQB1-203ENST00000399082 MSGN1A6NI15 193 aa9.71□□□□□ -0.86
HLA-DQB1-203ENST00000399082 C15orf61A6NNL5 157 aa9.71□□□□□ -0.86
HLA-DQB1-203ENST00000399082 HLA-AP01891 365 aaKnown RBP9.71□□□□□ -0.86
HLA-DQB1-203ENST00000399082 OPN1MWP04001 364 aa9.71□□□□□ -0.86
HLA-DQB1-203ENST00000399082 H2AFB2P0C5Z0 115 aa9.71□□□□□ -0.86
HLA-DQB1-203ENST00000399082 OPN1MW2P0DN77 364 aa9.71□□□□□ -0.86
HLA-DQB1-203ENST00000399082 OPN1MW3P0DN78 364 aa9.71□□□□□ -0.86
HLA-DQB1-203ENST00000399082 MAS1LP35410 378 aa9.71□□□□□ -0.86
HLA-DQB1-203ENST00000399082 RPL27AP46776 148 aaKnown RBP9.71□□□□□ -0.86
HLA-DQB1-203ENST00000399082 RAB25P57735 213 aa9.71□□□□□ -0.86
HLA-DQB1-203ENST00000399082 NMSQ5H8A3 153 aa9.71□□□□□ -0.86
HLA-DQB1-203ENST00000399082 C19orf35Q6ZS72 473 aa9.71□□□□□ -0.86
HLA-DQB1-203ENST00000399082 LYZL2Q7Z4W2 148 aa9.71□□□□□ -0.86
HLA-DQB1-203ENST00000399082 LYG2Q86SG7 212 aa9.71□□□□□ -0.86
HLA-DQB1-203ENST00000399082 C11orf44Q8N8P7 122 aa9.71□□□□□ -0.86
HLA-DQB1-203ENST00000399082 ENKURQ8TC29 256 aa9.71□□□□□ -0.86
HLA-DQB1-203ENST00000399082 CASTOR1Q8WTX7 329 aa9.71□□□□□ -0.86
HLA-DQB1-203ENST00000399082 GPR146Q96CH1 333 aa9.71□□□□□ -0.86
HLA-DQB1-203ENST00000399082 SEC22CQ9BRL7 303 aa9.71□□□□□ -0.86
HLA-DQB1-203ENST00000399082 PALMDQ9NP74 551 aa9.71□□□□□ -0.86
HLA-DQB1-203ENST00000399082 TMEM14BQ9NUH8 114 aa9.71□□□□□ -0.86
HLA-DQB1-203ENST00000399082 A0A0B4J2A0 478 aa9.7□□□□□ -0.86
HLA-DQB1-203ENST00000399082 TEX50A0A1B0GTY4 177 aa9.7□□□□□ -0.86
HLA-DQB1-203ENST00000399082 ADARB2-AS1A8MUL3 147 aa9.7□□□□□ -0.86
HLA-DQB1-203ENST00000399082 CREBL2O60519 120 aaPredicted RBP9.7□□□□□ -0.86
HLA-DQB1-203ENST00000399082 CNIH1O95406 144 aa9.7□□□□□ -0.86
HLA-DQB1-203ENST00000399082 IGLV1-40P01703 118 aa9.7□□□□□ -0.86
HLA-DQB1-203ENST00000399082 IGHG4P01861 327 aa9.7□□□□□ -0.86
HLA-DQB1-203ENST00000399082 APELAP0DMC3 54 aa9.7□□□□□ -0.86
HLA-DQB1-203ENST00000399082 AREGP15514 252 aa9.7□□□□□ -0.86
HLA-DQB1-203ENST00000399082 VDAC1P21796 283 aa9.7□□□□□ -0.86
HLA-DQB1-203ENST00000399082 AKR1C2P52895 323 aa9.7□□□□□ -0.86
HLA-DQB1-203ENST00000399082 DEFA1P59665 94 aa9.7□□□□□ -0.86
HLA-DQB1-203ENST00000399082 DEFA3P59666 94 aa9.7□□□□□ -0.86
HLA-DQB1-203ENST00000399082 AKIRIN2Q53H80 203 aa9.7□□□□□ -0.86
HLA-DQB1-203ENST00000399082 UNQ5815/PRO19632Q6UWF5 114 aa9.7□□□□□ -0.86
HLA-DQB1-203ENST00000399082 LCNL1Q6ZST4 164 aa9.7□□□□□ -0.86
HLA-DQB1-203ENST00000399082 H2BFWTQ7Z2G1 175 aa9.7□□□□□ -0.86
HLA-DQB1-203ENST00000399082 CENPVQ7Z7K6 275 aaPredicted RBP9.7□□□□□ -0.86
HLA-DQB1-203ENST00000399082 ZNF695Q8IW36 515 aa9.7□□□□□ -0.86
HLA-DQB1-203ENST00000399082 LGI3Q8N145 548 aa9.7□□□□□ -0.86
HLA-DQB1-203ENST00000399082 OR5AU1Q8NGC0 362 aa9.7□□□□□ -0.86
HLA-DQB1-203ENST00000399082 ABHD5Q8WTS1 349 aa9.7□□□□□ -0.86
HLA-DQB1-203ENST00000399082 LSM10Q969L4 123 aaKnown RBP9.7□□□□□ -0.86
HLA-DQB1-203ENST00000399082 QTRT1Q9BXR0 403 aaKnown RBP9.7□□□□□ -0.86
HLA-DQB1-203ENST00000399082 SHPKQ9UHJ6 478 aa9.7□□□□□ -0.86
HLA-DQB1-203ENST00000399082 FOXA2Q9Y261 457 aaPredicted RBP9.7□□□□□ -0.86
HLA-DQB1-203ENST00000399082 A0A1W2PN81 502 aa9.69□□□□□ -0.86
HLA-DQB1-203ENST00000399082 IGLC7A0M8Q6 106 aa9.69□□□□□ -0.86
HLA-DQB1-203ENST00000399082 DUS4LO95620 317 aaKnown RBP9.69□□□□□ -0.86
HLA-DQB1-203ENST00000399082 ANXA3P12429 323 aa9.69□□□□□ -0.86
HLA-DQB1-203ENST00000399082 PSMB8P28062 276 aa9.69□□□□□ -0.86
HLA-DQB1-203ENST00000399082 CHRNA7P36544 502 aa9.69□□□□□ -0.86
HLA-DQB1-203ENST00000399082 CD83Q01151 205 aa9.69□□□□□ -0.86
HLA-DQB1-203ENST00000399082 KIAA0141Q14154 515 aaPredicted RBP9.69□□□□□ -0.86
HLA-DQB1-203ENST00000399082 AARDQ4LEZ3 155 aa9.69□□□□□ -0.86
HLA-DQB1-203ENST00000399082 C4orf46Q504U0 113 aa9.69□□□□□ -0.86
HLA-DQB1-203ENST00000399082 RNF152Q8N8N0 203 aa9.69□□□□□ -0.86
HLA-DQB1-203ENST00000399082 OR10W1Q8NGF6 305 aa9.69□□□□□ -0.86
HLA-DQB1-203ENST00000399082 MYOZ3Q8TDC0 251 aa9.69□□□□□ -0.86
HLA-DQB1-203ENST00000399082 CITED2Q99967 270 aaPredicted RBP9.69□□□□□ -0.86
HLA-DQB1-203ENST00000399082 MARVELD1Q9BSK0 173 aa9.69□□□□□ -0.86
HLA-DQB1-203ENST00000399082 KLK15Q9H2R5 256 aa9.69□□□□□ -0.86
HLA-DQB1-203ENST00000399082 NDUFA4L2Q9NRX3 87 aa9.69□□□□□ -0.86
HLA-DQB1-203ENST00000399082 PRNDQ9UKY0 176 aa9.69□□□□□ -0.86
HLA-DQB1-203ENST00000399082 OR51B2Q9Y5P1 312 aa9.69□□□□□ -0.86
HLA-DQB1-203ENST00000399082 ST8SIA3O43173 380 aa9.68□□□□□ -0.86
HLA-DQB1-203ENST00000399082 FBXO24O75426 580 aa9.68□□□□□ -0.86
HLA-DQB1-203ENST00000399082 RBMXL2O75526 392 aaKnown RBP9.68□□□□□ -0.86
HLA-DQB1-203ENST00000399082 ADAP1O75689 374 aa9.68□□□□□ -0.86
HLA-DQB1-203ENST00000399082 SNAPC5O75971 98 aa9.68□□□□□ -0.86
HLA-DQB1-203ENST00000399082 ACTL6BO94805 426 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms