RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 MAS1LP35410 378 aa10.87□□□□□ -0.67
HLA-DQB1-202ENST00000399079 G6PCP35575 357 aa10.87□□□□□ -0.67
HLA-DQB1-202ENST00000399079 PPP5CP53041 499 aa10.87□□□□□ -0.67
HLA-DQB1-202ENST00000399079 ZNF45Q02386 682 aa10.87□□□□□ -0.67
HLA-DQB1-202ENST00000399079 SSBP1Q04837 148 aaKnown RBP10.87□□□□□ -0.67
HLA-DQB1-202ENST00000399079 TTC9CQ8N5M4 171 aa10.87□□□□□ -0.67
HLA-DQB1-202ENST00000399079 OR4A5Q8NH83 315 aa10.87□□□□□ -0.67
HLA-DQB1-202ENST00000399079 DCUN1D4Q92564 292 aa10.87□□□□□ -0.67
HLA-DQB1-202ENST00000399079 DLX4Q92988 240 aaPredicted RBP10.87□□□□□ -0.67
HLA-DQB1-202ENST00000399079 MCRIP2Q9BUT9 160 aaKnown RBP10.87□□□□□ -0.67
HLA-DQB1-202ENST00000399079 COMMD9Q9P000 198 aa10.87□□□□□ -0.67
HLA-DQB1-202ENST00000399079 TGP01266 2768 aa10.87□□□□□ -0.67
HLA-DQB1-202ENST00000399079 ANKRD34BA5PLL1 514 aa10.86□□□□□ -0.67
HLA-DQB1-202ENST00000399079 BRI3O95415 125 aa10.86□□□□□ -0.67
HLA-DQB1-202ENST00000399079 HSPB1P04792 205 aaKnown RBP10.86□□□□□ -0.67
HLA-DQB1-202ENST00000399079 AREGP15514 252 aa10.86□□□□□ -0.67
HLA-DQB1-202ENST00000399079 S100GP29377 79 aa10.86□□□□□ -0.67
HLA-DQB1-202ENST00000399079 TERB2Q8NHR7 220 aa10.86□□□□□ -0.67
HLA-DQB1-202ENST00000399079 MRGPRFQ96AM1 343 aa10.86□□□□□ -0.67
HLA-DQB1-202ENST00000399079 NSG2Q9Y328 171 aa10.86□□□□□ -0.67
HLA-DQB1-202ENST00000399079 A0A0G2JLM5 398 aa10.85□□□□□ -0.67
HLA-DQB1-202ENST00000399079 SEC14L6B5MCN3 397 aa10.85□□□□□ -0.67
HLA-DQB1-202ENST00000399079 ZNF701M0R085 212 aaPredicted RBP10.85□□□□□ -0.67
HLA-DQB1-202ENST00000399079 REG1AP05451 166 aa10.85□□□□□ -0.67
HLA-DQB1-202ENST00000399079 PIGPP57054 158 aa10.85□□□□□ -0.67
HLA-DQB1-202ENST00000399079 OR2B8PP59922 312 aa10.85□□□□□ -0.67
HLA-DQB1-202ENST00000399079 ERVK-16P61578 105 aa10.85□□□□□ -0.67
HLA-DQB1-202ENST00000399079 RHOGP84095 191 aa10.85□□□□□ -0.67
HLA-DQB1-202ENST00000399079 EGFEM1PQ0D2K5 195 aa10.85□□□□□ -0.67
HLA-DQB1-202ENST00000399079 OR4C16Q8NGL9 310 aa10.85□□□□□ -0.67
HLA-DQB1-202ENST00000399079 MARCH1Q8TCQ1 289 aa10.85□□□□□ -0.67
HLA-DQB1-202ENST00000399079 AKIP1Q9NQ31 210 aa10.85□□□□□ -0.67
HLA-DQB1-202ENST00000399079 RABL2AQ9UBK7 228 aaPredicted RBP10.85□□□□□ -0.67
HLA-DQB1-202ENST00000399079 RABL2BQ9UNT1 228 aa10.85□□□□□ -0.67
HLA-DQB1-202ENST00000399079 TRBV9A0A0B4J1U6 114 aa10.84□□□□□ -0.67
HLA-DQB1-202ENST00000399079 DPPA5A6NC42 116 aa10.84□□□□□ -0.67
HLA-DQB1-202ENST00000399079 GSTZ1O43708 216 aaPredicted RBP10.84□□□□□ -0.67
HLA-DQB1-202ENST00000399079 IGKV1-39P01597 117 aa10.84□□□□□ -0.67
HLA-DQB1-202ENST00000399079 TRBV12-3P01733 135 aa10.84□□□□□ -0.67
HLA-DQB1-202ENST00000399079 IGKV1D-39P04432 117 aa10.84□□□□□ -0.67
HLA-DQB1-202ENST00000399079 OR10W1Q8NGF6 305 aa10.84□□□□□ -0.67
HLA-DQB1-202ENST00000399079 OR13C8Q8NGS7 320 aa10.84□□□□□ -0.67
HLA-DQB1-202ENST00000399079 COMMD5Q9GZQ3 224 aa10.84□□□□□ -0.67
HLA-DQB1-202ENST00000399079 V9GYH0 126 aa10.84□□□□□ -0.67
HLA-DQB1-202ENST00000399079 ANKRD20A5PA0PJZ0 165 aa10.84□□□□□ -0.67
HLA-DQB1-202ENST00000399079 NPIPB5A8MRT5 1133 aa10.84□□□□□ -0.67
HLA-DQB1-202ENST00000399079 OVOL1O14753 267 aa10.84□□□□□ -0.67
HLA-DQB1-202ENST00000399079 OR2J3O76001 311 aa10.84□□□□□ -0.67
HLA-DQB1-202ENST00000399079 AKAIN1P0CW23 69 aa10.84□□□□□ -0.67
HLA-DQB1-202ENST00000399079 MEF2DQ14814 521 aa10.84□□□□□ -0.67
HLA-DQB1-202ENST00000399079 C9orf66Q5T8R8 295 aa10.84□□□□□ -0.67
HLA-DQB1-202ENST00000399079 ZNF343Q6P1L6 599 aa10.84□□□□□ -0.67
HLA-DQB1-202ENST00000399079 REC114Q7Z4M0 266 aa10.84□□□□□ -0.67
HLA-DQB1-202ENST00000399079 SLC25A42Q86VD7 318 aa10.84□□□□□ -0.67
HLA-DQB1-202ENST00000399079 ZNF486Q96H40 463 aaPredicted RBP10.84□□□□□ -0.67
HLA-DQB1-202ENST00000399079 SEC22AQ96IW7 307 aa10.84□□□□□ -0.67
HLA-DQB1-202ENST00000399079 USMG5Q96IX5 58 aa10.84□□□□□ -0.67
HLA-DQB1-202ENST00000399079 TP53RKQ96S44 253 aa10.84□□□□□ -0.67
HLA-DQB1-202ENST00000399079 KRTAP3-3Q9BYR6 98 aa10.84□□□□□ -0.67
HLA-DQB1-202ENST00000399079 KRTAP3-2Q9BYR7 98 aa10.84□□□□□ -0.67
HLA-DQB1-202ENST00000399079 GPR61Q9BZJ8 451 aa10.84□□□□□ -0.67
HLA-DQB1-202ENST00000399079 RANGRFQ9HD47 186 aaPredicted RBP10.84□□□□□ -0.67
HLA-DQB1-202ENST00000399079 ZNF257Q9Y2Q1 563 aa10.84□□□□□ -0.67
HLA-DQB1-202ENST00000399079 TEX50A0A1B0GTY4 177 aa10.83□□□□□ -0.68
HLA-DQB1-202ENST00000399079 WI2-2373I1.2A0A1W2PRP0 233 aa10.83□□□□□ -0.68
HLA-DQB1-202ENST00000399079 IGLC7A0M8Q6 106 aa10.83□□□□□ -0.68
HLA-DQB1-202ENST00000399079 DBX1A6NMT0 343 aa10.83□□□□□ -0.68
HLA-DQB1-202ENST00000399079 CTRB1P17538 263 aa10.83□□□□□ -0.68
HLA-DQB1-202ENST00000399079 PSMB6P28072 239 aa10.83□□□□□ -0.68
HLA-DQB1-202ENST00000399079 S100A5P33763 92 aa10.83□□□□□ -0.68
HLA-DQB1-202ENST00000399079 RND3P61587 244 aa10.83□□□□□ -0.68
HLA-DQB1-202ENST00000399079 CTRB2Q6GPI1 263 aa10.83□□□□□ -0.68
HLA-DQB1-202ENST00000399079 OR51S1Q8NGJ8 323 aa10.83□□□□□ -0.68
HLA-DQB1-202ENST00000399079 ZFAND1Q8TCF1 268 aa10.83□□□□□ -0.68
HLA-DQB1-202ENST00000399079 MRAPQ8TCY5 172 aa10.83□□□□□ -0.68
HLA-DQB1-202ENST00000399079 FANCD2OSQ96PS1 177 aa10.83□□□□□ -0.68
HLA-DQB1-202ENST00000399079 THAP7Q9BT49 309 aaPredicted RBP10.83□□□□□ -0.68
HLA-DQB1-202ENST00000399079 FAM212BQ9NTI7 297 aaPredicted RBP10.83□□□□□ -0.68
HLA-DQB1-202ENST00000399079 PEF1Q9UBV8 284 aaKnown RBP10.83□□□□□ -0.68
HLA-DQB1-202ENST00000399079 FAM223BA6NKX1 122 aa10.82□□□□□ -0.68
HLA-DQB1-202ENST00000399079 DISC1C4P0D8 188 aa10.82□□□□□ -0.68
HLA-DQB1-202ENST00000399079 SERPINE2P07093 398 aa10.82□□□□□ -0.68
HLA-DQB1-202ENST00000399079 CRYGCP07315 174 aa10.82□□□□□ -0.68
HLA-DQB1-202ENST00000399079 PTBP1P26599 531 aaKnown RBP eCLIP10.82□□□□□ -0.68
HLA-DQB1-202ENST00000399079 ATP5G2Q06055 141 aa10.82□□□□□ -0.68
HLA-DQB1-202ENST00000399079 EXOSC2Q13868 293 aaKnown RBP10.82□□□□□ -0.68
HLA-DQB1-202ENST00000399079 ZNF79Q15937 498 aa10.82□□□□□ -0.68
HLA-DQB1-202ENST00000399079 C15orf32Q32M92 178 aa10.82□□□□□ -0.68
HLA-DQB1-202ENST00000399079 SP6Q3SY56 376 aa10.82□□□□□ -0.68
HLA-DQB1-202ENST00000399079 PYDC2Q56P42 97 aa10.82□□□□□ -0.68
HLA-DQB1-202ENST00000399079 CCDC190Q86UF4 302 aa10.82□□□□□ -0.68
HLA-DQB1-202ENST00000399079 FAM223AQ8IWN6 122 aa10.82□□□□□ -0.68
HLA-DQB1-202ENST00000399079 NECAP1Q8NC96 275 aa10.82□□□□□ -0.68
HLA-DQB1-202ENST00000399079 RTBDNQ9BSG5 229 aaPredicted RBP10.82□□□□□ -0.68
HLA-DQB1-202ENST00000399079 HINT2Q9BX68 163 aa10.82□□□□□ -0.68
HLA-DQB1-202ENST00000399079 QTRT1Q9BXR0 403 aaKnown RBP10.82□□□□□ -0.68
HLA-DQB1-202ENST00000399079 COPZ2Q9P299 210 aa10.82□□□□□ -0.68
HLA-DQB1-202ENST00000399079 S4R3C0 116 aa10.82□□□□□ -0.68
HLA-DQB1-202ENST00000399079 C3orf85A0A1B0GTC6 90 aa10.81□□□□□ -0.68
HLA-DQB1-202ENST00000399079 H0Y980 276 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms