RNA–Protein interactions for RNA: ENST00000398043.2

APTR-201, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best)

Gene APTR, Length 528 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-201ENST00000398043 LPAR6P43657 344 aa12.83□□□□□ -0.36
APTR-201ENST00000398043 OR2B8PP59922 312 aa12.83□□□□□ -0.36
APTR-201ENST00000398043 MRPS10P82664 201 aaKnown RBP12.83□□□□□ -0.36
APTR-201ENST00000398043 PHLDA2Q53GA4 152 aa12.83□□□□□ -0.36
APTR-201ENST00000398043 RNASE10Q5GAN6 216 aaKnown RBP12.83□□□□□ -0.36
APTR-201ENST00000398043 SLC38A6Q8IZM9 456 aa12.83□□□□□ -0.36
APTR-201ENST00000398043 ARRDC1Q8N5I2 433 aa12.83□□□□□ -0.36
APTR-201ENST00000398043 MRGPRFQ96AM1 343 aa12.83□□□□□ -0.36
APTR-201ENST00000398043 DIRAS2Q96HU8 199 aa12.83□□□□□ -0.36
APTR-201ENST00000398043 AKIP1Q9NQ31 210 aa12.83□□□□□ -0.36
APTR-201ENST00000398043 TMEM140Q9NV12 185 aa12.83□□□□□ -0.36
APTR-201ENST00000398043 ZNF257Q9Y2Q1 563 aa12.83□□□□□ -0.36
APTR-201ENST00000398043 MARCH11A6NNE9 402 aa12.82□□□□□ -0.36
APTR-201ENST00000398043 MPPED1O15442 326 aa12.82□□□□□ -0.36
APTR-201ENST00000398043 TRBV12-3P01733 135 aa12.82□□□□□ -0.36
APTR-201ENST00000398043 AREGP15514 252 aa12.82□□□□□ -0.36
APTR-201ENST00000398043 PTBP1P26599 531 aaKnown RBP eCLIP12.82□□□□□ -0.36
APTR-201ENST00000398043 RHOGP84095 191 aa12.82□□□□□ -0.36
APTR-201ENST00000398043 ACSM6Q6P461 480 aa12.82□□□□□ -0.36
APTR-201ENST00000398043 C19orf35Q6ZS72 473 aa12.82□□□□□ -0.36
APTR-201ENST00000398043 TBC1D26Q86UD7 250 aa12.82□□□□□ -0.36
APTR-201ENST00000398043 RANGRFQ9HD47 186 aaPredicted RBP12.82□□□□□ -0.36
APTR-201ENST00000398043 HRASLSQ9HDD0 168 aa12.82□□□□□ -0.36
APTR-201ENST00000398043 RABL2AQ9UBK7 228 aaPredicted RBP12.82□□□□□ -0.36
APTR-201ENST00000398043 RABL2BQ9UNT1 228 aa12.82□□□□□ -0.36
APTR-201ENST00000398043 IGLC7A0M8Q6 106 aa12.81□□□□□ -0.36
APTR-201ENST00000398043 FAM223BA6NKX1 122 aa12.81□□□□□ -0.36
APTR-201ENST00000398043 NOL3O60936 208 aaKnown RBP12.81□□□□□ -0.36
APTR-201ENST00000398043 IGKV1-39P01597 117 aa12.81□□□□□ -0.36
APTR-201ENST00000398043 IGKV1D-39P04432 117 aa12.81□□□□□ -0.36
APTR-201ENST00000398043 CTRB1P17538 263 aa12.81□□□□□ -0.36
APTR-201ENST00000398043 TNFSF8P32971 234 aa12.81□□□□□ -0.36
APTR-201ENST00000398043 INSL3P51460 131 aa12.81□□□□□ -0.36
APTR-201ENST00000398043 TAS2R19P59542 299 aa12.81□□□□□ -0.36
APTR-201ENST00000398043 RND3P61587 244 aa12.81□□□□□ -0.36
APTR-201ENST00000398043 CTRB2Q6GPI1 263 aa12.81□□□□□ -0.36
APTR-201ENST00000398043 SLC25A42Q86VD7 318 aa12.81□□□□□ -0.36
APTR-201ENST00000398043 FAM223AQ8IWN6 122 aa12.81□□□□□ -0.36
APTR-201ENST00000398043 FANCD2OSQ96PS1 177 aa12.81□□□□□ -0.36
APTR-201ENST00000398043 FYTTD1Q96QD9 318 aaKnown RBP12.81□□□□□ -0.36
APTR-201ENST00000398043 C6orf62Q9GZU0 229 aaPredicted RBP12.81□□□□□ -0.36
APTR-201ENST00000398043 DMRT1Q9Y5R6 373 aa12.81□□□□□ -0.36
APTR-201ENST00000398043 COL7A1Q02388 2944 aa12.81□□□□□ -0.36
APTR-201ENST00000398043 ANKRD34BA5PLL1 514 aa12.8□□□□□ -0.36
APTR-201ENST00000398043 GSTZ1O43708 216 aaPredicted RBP12.8□□□□□ -0.36
APTR-201ENST00000398043 RPA2P15927 270 aa12.8□□□□□ -0.36
APTR-201ENST00000398043 PSMB6P28072 239 aa12.8□□□□□ -0.36
APTR-201ENST00000398043 KLF5Q13887 457 aaPredicted RBP12.8□□□□□ -0.36
APTR-201ENST00000398043 STEAP1BQ6NZ63 245 aa12.8□□□□□ -0.36
APTR-201ENST00000398043 NECAP1Q8NC96 275 aa12.8□□□□□ -0.36
APTR-201ENST00000398043 DMBX1Q8NFW5 382 aa12.8□□□□□ -0.36
APTR-201ENST00000398043 TERB2Q8NHR7 220 aa12.8□□□□□ -0.36
APTR-201ENST00000398043 ZNF486Q96H40 463 aaPredicted RBP12.8□□□□□ -0.36
APTR-201ENST00000398043 SEC22AQ96IW7 307 aa12.8□□□□□ -0.36
APTR-201ENST00000398043 PEF1Q9UBV8 284 aaKnown RBP12.8□□□□□ -0.36
APTR-201ENST00000398043 RAB3DO95716 219 aa12.79□□□□□ -0.36
APTR-201ENST00000398043 KRASP01116 189 aa12.79□□□□□ -0.36
APTR-201ENST00000398043 IFNA6P05013 189 aa12.79□□□□□ -0.36
APTR-201ENST00000398043 ZP3P21754 424 aa12.79□□□□□ -0.36
APTR-201ENST00000398043 G6PCP35575 357 aa12.79□□□□□ -0.36
APTR-201ENST00000398043 IL18Q14116 193 aa12.79□□□□□ -0.36
APTR-201ENST00000398043 ZNF429Q86V71 674 aa12.79□□□□□ -0.36
APTR-201ENST00000398043 MCFD2Q8NI22 146 aa12.79□□□□□ -0.36
APTR-201ENST00000398043 SRSF8Q9BRL6 282 aaKnown RBP12.79□□□□□ -0.36
APTR-201ENST00000398043 IGLV11-55A0A075B6I3 123 aa12.78□□□□□ -0.36
APTR-201ENST00000398043 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.78□□□□□ -0.36
APTR-201ENST00000398043 TEX50A0A1B0GTY4 177 aa12.78□□□□□ -0.36
APTR-201ENST00000398043 ZNF701M0R085 212 aaPredicted RBP12.78□□□□□ -0.36
APTR-201ENST00000398043 OR2J3O76001 311 aa12.78□□□□□ -0.36
APTR-201ENST00000398043 PI3P19957 117 aa12.78□□□□□ -0.36
APTR-201ENST00000398043 ERVK-16P61578 105 aa12.78□□□□□ -0.36
APTR-201ENST00000398043 ATP5G2Q06055 141 aa12.78□□□□□ -0.36
APTR-201ENST00000398043 FAAP20Q6NZ36 180 aa12.78□□□□□ -0.36
APTR-201ENST00000398043 IL34Q6ZMJ4 242 aa12.78□□□□□ -0.36
APTR-201ENST00000398043 ZMAT5Q9UDW3 170 aaKnown RBP12.78□□□□□ -0.36
APTR-201ENST00000398043 ANKRD20A5PA0PJZ0 165 aa12.77□□□□□ -0.37
APTR-201ENST00000398043 DBX1A6NMT0 343 aa12.77□□□□□ -0.37
APTR-201ENST00000398043 BMPR1BO00238 502 aa12.77□□□□□ -0.37
APTR-201ENST00000398043 REG1AP05451 166 aa12.77□□□□□ -0.37
APTR-201ENST00000398043 S100GP29377 79 aa12.77□□□□□ -0.37
APTR-201ENST00000398043 PIGPP57054 158 aa12.77□□□□□ -0.37
APTR-201ENST00000398043 EXOSC2Q13868 293 aaKnown RBP12.77□□□□□ -0.37
APTR-201ENST00000398043 C15orf32Q32M92 178 aa12.77□□□□□ -0.37
APTR-201ENST00000398043 OR10W1Q8NGF6 305 aa12.77□□□□□ -0.37
APTR-201ENST00000398043 OR4C16Q8NGL9 310 aa12.77□□□□□ -0.37
APTR-201ENST00000398043 OR13C8Q8NGS7 320 aa12.77□□□□□ -0.37
APTR-201ENST00000398043 TP53RKQ96S44 253 aa12.77□□□□□ -0.37
APTR-201ENST00000398043 QTRT1Q9BXR0 403 aaKnown RBP12.77□□□□□ -0.37
APTR-201ENST00000398043 COMMD5Q9GZQ3 224 aa12.77□□□□□ -0.37
APTR-201ENST00000398043 NDUFA4L2Q9NRX3 87 aa12.77□□□□□ -0.37
APTR-201ENST00000398043 TMEM14BQ9NUH8 114 aa12.77□□□□□ -0.37
APTR-201ENST00000398043 RSL24D1Q9UHA3 163 aaKnown RBP12.77□□□□□ -0.37
APTR-201ENST00000398043 FBXL7Q9UJT9 491 aa12.77□□□□□ -0.37
APTR-201ENST00000398043 LSM4Q9Y4Z0 139 aaKnown RBP12.77□□□□□ -0.37
APTR-201ENST00000398043 NDUFB8O95169 186 aa12.76□□□□□ -0.37
APTR-201ENST00000398043 P0C879 139 aa12.76□□□□□ -0.37
APTR-201ENST00000398043 PGAM2P15259 253 aa12.76□□□□□ -0.37
APTR-201ENST00000398043 ECI1P42126 302 aa12.76□□□□□ -0.37
APTR-201ENST00000398043 PPP5CP53041 499 aa12.76□□□□□ -0.37
APTR-201ENST00000398043 WT1-ASQ06250 92 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms