RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 ICAM4Q14773 271 aa9.59□□□□□ -0.87
TTC28-201ENST00000397906 OR4A47Q6IF82 309 aa9.59□□□□□ -0.87
TTC28-201ENST00000397906 JMJD8Q96S16 334 aa9.59□□□□□ -0.87
TTC28-201ENST00000397906 RBM38Q9H0Z9 239 aaKnown RBP9.59□□□□□ -0.87
TTC28-201ENST00000397906 GPR132Q9UNW8 380 aa9.59□□□□□ -0.87
TTC28-201ENST00000397906 IFITM10A6NMD0 228 aa9.59□□□□□ -0.87
TTC28-201ENST00000397906 SRD5A1P18405 259 aa9.59□□□□□ -0.87
TTC28-201ENST00000397906 CFHR1Q03591 330 aa9.59□□□□□ -0.87
TTC28-201ENST00000397906 SIGIRRQ6IA17 410 aa9.59□□□□□ -0.87
TTC28-201ENST00000397906 ZFP30Q9Y2G7 519 aa9.59□□□□□ -0.87
TTC28-201ENST00000397906 LTBP1Q14766 1721 aa9.58□□□□□ -0.88
TTC28-201ENST00000397906 TMEM218A2RU14 115 aa9.58□□□□□ -0.88
TTC28-201ENST00000397906 LDLRAD2Q5SZI1 272 aa9.58□□□□□ -0.88
TTC28-201ENST00000397906 GEMIN7Q9H840 131 aaKnown RBP9.58□□□□□ -0.88
TTC28-201ENST00000397906 MSGN1A6NI15 193 aa9.58□□□□□ -0.88
TTC28-201ENST00000397906 E9PLN8 166 aa9.58□□□□□ -0.88
TTC28-201ENST00000397906 CD1AP06126 327 aa9.58□□□□□ -0.88
TTC28-201ENST00000397906 VKORC1Q9BQB6 163 aa9.58□□□□□ -0.88
TTC28-201ENST00000397906 ACAA1P09110 424 aaPredicted RBP9.58□□□□□ -0.88
TTC28-201ENST00000397906 RPL24P83731 157 aaKnown RBP9.58□□□□□ -0.88
TTC28-201ENST00000397906 TP53RKQ96S44 253 aa9.58□□□□□ -0.88
TTC28-201ENST00000397906 RARRES2Q99969 163 aa9.58□□□□□ -0.88
TTC28-201ENST00000397906 OTX1P32242 354 aaPredicted RBP9.58□□□□□ -0.88
TTC28-201ENST00000397906 MRAP2Q96G30 205 aa9.58□□□□□ -0.88
TTC28-201ENST00000397906 UQCRFS1P47985 274 aa9.58□□□□□ -0.88
TTC28-201ENST00000397906 COMPP49747 757 aaPredicted RBP9.58□□□□□ -0.88
TTC28-201ENST00000397906 NRN1LQ496H8 165 aa9.58□□□□□ -0.88
TTC28-201ENST00000397906 KBTBD11-OT1A0A1B0GTJ5 212 aa9.58□□□□□ -0.88
TTC28-201ENST00000397906 BET1LQ9NYM9 111 aa9.58□□□□□ -0.88
TTC28-201ENST00000397906 TMEM219Q86XT9 240 aa9.58□□□□□ -0.88
TTC28-201ENST00000397906 PRSS2P07478 247 aa9.57□□□□□ -0.88
TTC28-201ENST00000397906 TRBV5-7A0A0A0MS05 114 aa9.57□□□□□ -0.88
TTC28-201ENST00000397906 IGHV1-18A0A0C4DH31 117 aa9.57□□□□□ -0.88
TTC28-201ENST00000397906 OR13C6PQ8NH95 151 aa9.57□□□□□ -0.88
TTC28-201ENST00000397906 PRSS22Q9GZN4 317 aa9.57□□□□□ -0.88
TTC28-201ENST00000397906 APC2O95996 2303 aa9.57□□□□□ -0.88
TTC28-201ENST00000397906 FBLL1A6NHQ2 334 aaKnown RBP9.57□□□□□ -0.88
TTC28-201ENST00000397906 SLC25A38Q96DW6 304 aa9.57□□□□□ -0.88
TTC28-201ENST00000397906 TMEM101Q96IK0 257 aa9.57□□□□□ -0.88
TTC28-201ENST00000397906 MAP1LC3AQ9H492 121 aa9.57□□□□□ -0.88
TTC28-201ENST00000397906 LGALS3P17931 250 aaKnown RBP9.57□□□□□ -0.88
TTC28-201ENST00000397906 GREB1Q4ZG55 1949 aa9.57□□□□□ -0.88
TTC28-201ENST00000397906 TM4SF5O14894 197 aa9.57□□□□□ -0.88
TTC28-201ENST00000397906 SIGLEC5O15389 551 aa9.57□□□□□ -0.88
TTC28-201ENST00000397906 GCGP01275 180 aa9.57□□□□□ -0.88
TTC28-201ENST00000397906 CHRNA10Q9GZZ6 450 aa9.57□□□□□ -0.88
TTC28-201ENST00000397906 CEP290O15078 2479 aa9.57□□□□□ -0.88
TTC28-201ENST00000397906 TRBV20OR9-2A0A075B6H5 130 aa9.57□□□□□ -0.88
TTC28-201ENST00000397906 C17orf98A8MV24 154 aa9.57□□□□□ -0.88
TTC28-201ENST00000397906 GCSAMLQ5JQS6 135 aa9.57□□□□□ -0.88
TTC28-201ENST00000397906 DNLZQ5SXM8 178 aa9.57□□□□□ -0.88
TTC28-201ENST00000397906 CYP2G1PQ6ZSU1 146 aa9.57□□□□□ -0.88
TTC28-201ENST00000397906 SPTBP11277 2137 aa9.56□□□□□ -0.88
TTC28-201ENST00000397906 C21orf62Q9NYP8 219 aa9.56□□□□□ -0.88
TTC28-201ENST00000397906 FAM74A7A6NL05 159 aa9.56□□□□□ -0.88
TTC28-201ENST00000397906 Q71RC1 249 aaPredicted RBP9.56□□□□□ -0.88
TTC28-201ENST00000397906 WFIKKN1Q96NZ8 548 aa9.56□□□□□ -0.88
TTC28-201ENST00000397906 WNT10AQ9GZT5 417 aa9.56□□□□□ -0.88
TTC28-201ENST00000397906 TNFRSF18Q9Y5U5 241 aa9.56□□□□□ -0.88
TTC28-201ENST00000397906 RTN4RL2Q86UN3 420 aa9.56□□□□□ -0.88
TTC28-201ENST00000397906 C7orf71A4D174 169 aa9.56□□□□□ -0.88
TTC28-201ENST00000397906 PIN1P1O15428 100 aa9.56□□□□□ -0.88
TTC28-201ENST00000397906 ZNF345Q14585 488 aa9.56□□□□□ -0.88
TTC28-201ENST00000397906 C1orf100Q5SVJ3 147 aa9.56□□□□□ -0.88
TTC28-201ENST00000397906 LINC01590Q5TEZ4 76 aa9.56□□□□□ -0.88
TTC28-201ENST00000397906 SBF1O95248 1867 aa9.56□□□□□ -0.88
TTC28-201ENST00000397906 RPS11P62280 158 aaKnown RBP eCLIP9.56□□□□□ -0.88
TTC28-201ENST00000397906 SAA2-SAA4A0A096LPE2 208 aa9.56□□□□□ -0.88
TTC28-201ENST00000397906 SAA2P0DJI9 122 aaPredicted RBP9.56□□□□□ -0.88
TTC28-201ENST00000397906 RAB9AP51151 201 aa9.56□□□□□ -0.88
TTC28-201ENST00000397906 ZFP36L1Q07352 338 aaKnown RBP9.56□□□□□ -0.88
TTC28-201ENST00000397906 SLC25A28Q96A46 364 aa9.56□□□□□ -0.88
TTC28-201ENST00000397906 NYNRINQ9P2P1 1898 aaKnown RBP9.56□□□□□ -0.88
TTC28-201ENST00000397906 DIRC3C9JPN6 131 aa9.56□□□□□ -0.88
TTC28-201ENST00000397906 MEF2BQ02080 365 aaPredicted RBP9.56□□□□□ -0.88
TTC28-201ENST00000397906 WDR82Q6UXN9 313 aa9.56□□□□□ -0.88
TTC28-201ENST00000397906 POC1AQ8NBT0 407 aa9.56□□□□□ -0.88
TTC28-201ENST00000397906 CLDND2Q8NHS1 167 aa9.56□□□□□ -0.88
TTC28-201ENST00000397906 LINC00312Q9Y6C7 94 aa9.56□□□□□ -0.88
TTC28-201ENST00000397906 ARID1AO14497 2285 aa9.56□□□□□ -0.88
TTC28-201ENST00000397906 TRAV24A0A0B4J272 114 aa9.55□□□□□ -0.88
TTC28-201ENST00000397906 COX19Q49B96 90 aa9.55□□□□□ -0.88
TTC28-201ENST00000397906 RAB24Q969Q5 203 aa9.55□□□□□ -0.88
TTC28-201ENST00000397906 KIR2DL4Q99706 377 aa9.55□□□□□ -0.88
TTC28-201ENST00000397906 LOC390937A0A1W2PQ73 354 aa9.55□□□□□ -0.88
TTC28-201ENST00000397906 LCTP09848 1927 aa9.55□□□□□ -0.88
TTC28-201ENST00000397906 NRIP2Q9BQI9 281 aa9.55□□□□□ -0.88
TTC28-201ENST00000397906 TUBD1Q9UJT1 453 aa9.55□□□□□ -0.88
TTC28-201ENST00000397906 TRGC1P0CF51 173 aa9.55□□□□□ -0.88
TTC28-201ENST00000397906 ZNF25P17030 456 aaPredicted RBP9.55□□□□□ -0.88
TTC28-201ENST00000397906 LOC107984156A0A0G2JMH3 177 aa9.55□□□□□ -0.88
TTC28-201ENST00000397906 ARL17AQ8IVW1 177 aa9.55□□□□□ -0.88
TTC28-201ENST00000397906 ASXL3Q9C0F0 2248 aa9.55□□□□□ -0.88
TTC28-201ENST00000397906 CXCL2P19875 107 aa9.55□□□□□ -0.88
TTC28-201ENST00000397906 C8orf46Q8TAG6 207 aa9.55□□□□□ -0.88
TTC28-201ENST00000397906 J3QW42 95 aa9.55□□□□□ -0.88
TTC28-201ENST00000397906 AICDAQ9GZX7 198 aa9.55□□□□□ -0.88
TTC28-201ENST00000397906 SAP30O75446 220 aa9.55□□□□□ -0.88
TTC28-201ENST00000397906 IGFBP2P18065 325 aa9.55□□□□□ -0.88
TTC28-201ENST00000397906 SEMA5BQ9P283 1151 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms