RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 SNRPEP62304 92 aaKnown RBP15.74■□□□□ 0.11
PDLIM2-204ENST00000397760 THNSL2Q86YJ6 484 aa15.74■□□□□ 0.11
PDLIM2-204ENST00000397760 LYG1Q8N1E2 194 aa15.74■□□□□ 0.11
PDLIM2-204ENST00000397760 ABHD12Q8N2K0 398 aa15.74■□□□□ 0.11
PDLIM2-204ENST00000397760 PINX1Q96BK5 328 aaKnown RBP15.74■□□□□ 0.11
PDLIM2-204ENST00000397760 RFNGQ9Y644 331 aa15.74■□□□□ 0.11
PDLIM2-204ENST00000397760 IFNA17P01571 189 aa15.73■□□□□ 0.11
PDLIM2-204ENST00000397760 ZNF16P17020 682 aaPredicted RBP15.73■□□□□ 0.11
PDLIM2-204ENST00000397760 DLX1P56177 255 aa15.73■□□□□ 0.11
PDLIM2-204ENST00000397760 PAX2Q02962 417 aa15.73■□□□□ 0.11
PDLIM2-204ENST00000397760 EIF4EBP1Q13541 118 aaPredicted RBP15.73■□□□□ 0.11
PDLIM2-204ENST00000397760 LRRC75BQ2VPJ9 315 aa15.73■□□□□ 0.11
PDLIM2-204ENST00000397760 FAM24BQ8N5W8 94 aa15.73■□□□□ 0.11
PDLIM2-204ENST00000397760 Q8N7P7 452 aa15.73■□□□□ 0.11
PDLIM2-204ENST00000397760 ISOC2Q96AB3 205 aa15.73■□□□□ 0.11
PDLIM2-204ENST00000397760 TVP23CQ96ET8 276 aa15.73■□□□□ 0.11
PDLIM2-204ENST00000397760 ZNRD1Q9P1U0 126 aa15.73■□□□□ 0.11
PDLIM2-204ENST00000397760 GAB2Q9UQC2 676 aa15.73■□□□□ 0.11
PDLIM2-204ENST00000397760 YLPM1P49750 1951 aaKnown RBP15.73■□□□□ 0.11
PDLIM2-204ENST00000397760 DOCK11Q5JSL3 2073 aa15.73■□□□□ 0.11
PDLIM2-204ENST00000397760 IGHV2-70DA0A0C4DH43 119 aa15.73■□□□□ 0.11
PDLIM2-204ENST00000397760 LOC102723971A0A1B0GUV8 181 aa15.73■□□□□ 0.11
PDLIM2-204ENST00000397760 J3QR06 171 aa15.73■□□□□ 0.11
PDLIM2-204ENST00000397760 RAB29O14966 203 aa15.73■□□□□ 0.11
PDLIM2-204ENST00000397760 PROP1O75360 226 aa15.73■□□□□ 0.11
PDLIM2-204ENST00000397760 RPL39P5Q59GN2 51 aa15.73■□□□□ 0.11
PDLIM2-204ENST00000397760 C8orf31Q8N9H6 132 aa15.73■□□□□ 0.11
PDLIM2-204ENST00000397760 OR9G1Q8NH87 305 aa15.73■□□□□ 0.11
PDLIM2-204ENST00000397760 NIPSNAP3BQ9BS92 247 aa15.73■□□□□ 0.11
PDLIM2-204ENST00000397760 A0A1B0GV50 99 aa15.72■□□□□ 0.11
PDLIM2-204ENST00000397760 EIF3GO75821 320 aaKnown RBP eCLIP15.72■□□□□ 0.11
PDLIM2-204ENST00000397760 USF1P22415 310 aaPredicted RBP15.72■□□□□ 0.11
PDLIM2-204ENST00000397760 HAGHQ16775 308 aa15.72■□□□□ 0.11
PDLIM2-204ENST00000397760 ZNF66Q6ZN08 573 aa15.72■□□□□ 0.11
PDLIM2-204ENST00000397760 ZNF429Q86V71 674 aa15.72■□□□□ 0.11
PDLIM2-204ENST00000397760 LINC00311Q8N616 119 aa15.72■□□□□ 0.11
PDLIM2-204ENST00000397760 ZNF596Q8TC21 504 aa15.72■□□□□ 0.11
PDLIM2-204ENST00000397760 P2RX4Q99571 388 aa15.72■□□□□ 0.11
PDLIM2-204ENST00000397760 LPAR2Q9HBW0 351 aa15.72■□□□□ 0.11
PDLIM2-204ENST00000397760 TIMM9Q9Y5J7 89 aa15.72■□□□□ 0.11
PDLIM2-204ENST00000397760 GCN1Q92616 2671 aaKnown RBP15.71■□□□□ 0.11
PDLIM2-204ENST00000397760 SAA2-SAA4A0A096LPE2 208 aa15.71■□□□□ 0.11
PDLIM2-204ENST00000397760 IGHV2-26A0A0B4J1V2 119 aa15.71■□□□□ 0.11
PDLIM2-204ENST00000397760 M0R1X1 148 aa15.71■□□□□ 0.11
PDLIM2-204ENST00000397760 NDUFS6O75380 124 aaKnown RBP15.71■□□□□ 0.11
PDLIM2-204ENST00000397760 NXPH3O95157 252 aa15.71■□□□□ 0.11
PDLIM2-204ENST00000397760 SAA2P0DJI9 122 aaPredicted RBP15.71■□□□□ 0.11
PDLIM2-204ENST00000397760 UBE2KP61086 200 aa15.71■□□□□ 0.11
PDLIM2-204ENST00000397760 RPL30P62888 115 aaKnown RBP15.71■□□□□ 0.11
PDLIM2-204ENST00000397760 PRB3Q04118 309 aaPredicted RBP15.71■□□□□ 0.11
PDLIM2-204ENST00000397760 TMEM267Q0VDI3 215 aaPredicted RBP15.71■□□□□ 0.11
PDLIM2-204ENST00000397760 PNRC1Q12796 327 aaPredicted RBP15.71■□□□□ 0.11
PDLIM2-204ENST00000397760 C1orf229Q6ZS94 237 aaPredicted RBP15.71■□□□□ 0.11
PDLIM2-204ENST00000397760 C1orf122Q6ZSJ8 110 aa15.71■□□□□ 0.11
PDLIM2-204ENST00000397760 KIR3DL3Q8N743 410 aa15.71■□□□□ 0.11
PDLIM2-204ENST00000397760 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.71■□□□□ 0.11
PDLIM2-204ENST00000397760 POLR3KQ9Y2Y1 108 aaPredicted RBP15.71■□□□□ 0.11
PDLIM2-204ENST00000397760 ARG1P05089 322 aa15.71■□□□□ 0.1
PDLIM2-204ENST00000397760 CATR1Q13166 79 aa15.71■□□□□ 0.1
PDLIM2-204ENST00000397760 ATP6V1FQ16864 119 aa15.71■□□□□ 0.1
PDLIM2-204ENST00000397760 CENPVQ7Z7K6 275 aaPredicted RBP15.71■□□□□ 0.1
PDLIM2-204ENST00000397760 OR10X1Q8NGY0 326 aa15.71■□□□□ 0.1
PDLIM2-204ENST00000397760 TCTEX1D2Q8WW35 142 aa15.71■□□□□ 0.1
PDLIM2-204ENST00000397760 HSD17B10Q99714 261 aaKnown RBP15.71■□□□□ 0.1
PDLIM2-204ENST00000397760 CENPEQ02224 2701 aa15.7■□□□□ 0.1
PDLIM2-204ENST00000397760 S100A9P06702 114 aaKnown RBP15.7■□□□□ 0.1
PDLIM2-204ENST00000397760 PRTN3P24158 256 aa15.7■□□□□ 0.1
PDLIM2-204ENST00000397760 TAGLN2P37802 199 aaKnown RBP15.7■□□□□ 0.1
PDLIM2-204ENST00000397760 LINC00205P59089 165 aa15.7■□□□□ 0.1
PDLIM2-204ENST00000397760 Q5PR19 223 aa15.7■□□□□ 0.1
PDLIM2-204ENST00000397760 CYB561D1Q8N8Q1 229 aa15.7■□□□□ 0.1
PDLIM2-204ENST00000397760 S1PR3Q99500 378 aa15.7■□□□□ 0.1
PDLIM2-204ENST00000397760 ZNF251Q9BRH9 671 aa15.7■□□□□ 0.1
PDLIM2-204ENST00000397760 CLEC7AQ9BXN2 247 aa15.7■□□□□ 0.1
PDLIM2-204ENST00000397760 WDR61Q9GZS3 305 aaKnown RBP15.7■□□□□ 0.1
PDLIM2-204ENST00000397760 RPRMQ9NS64 109 aa15.7■□□□□ 0.1
PDLIM2-204ENST00000397760 HSPB7Q9UBY9 170 aa15.7■□□□□ 0.1
PDLIM2-204ENST00000397760 LINC00473A8K010 186 aa15.69■□□□□ 0.1
PDLIM2-204ENST00000397760 H3BP45 60 aa15.69■□□□□ 0.1
PDLIM2-204ENST00000397760 P0C879 139 aa15.69■□□□□ 0.1
PDLIM2-204ENST00000397760 COX7A1P24310 79 aa15.69■□□□□ 0.1
PDLIM2-204ENST00000397760 DUTP33316 252 aaKnown RBP15.69■□□□□ 0.1
PDLIM2-204ENST00000397760 PRRX1P54821 245 aa15.69■□□□□ 0.1
PDLIM2-204ENST00000397760 TMEM14EPQ6UXP3 125 aa15.69■□□□□ 0.1
PDLIM2-204ENST00000397760 LILRB2Q8N423 598 aa15.69■□□□□ 0.1
PDLIM2-204ENST00000397760 OR13D1Q8NGV5 346 aa15.69■□□□□ 0.1
PDLIM2-204ENST00000397760 TNFRSF14Q92956 283 aa15.69■□□□□ 0.1
PDLIM2-204ENST00000397760 TMEM242Q9NWH2 141 aa15.69■□□□□ 0.1
PDLIM2-204ENST00000397760 AP4M1O00189 453 aa15.68■□□□□ 0.1
PDLIM2-204ENST00000397760 METTL15P1P0C7V9 234 aa15.68■□□□□ 0.1
PDLIM2-204ENST00000397760 BCL2P10415 239 aa15.68■□□□□ 0.1
PDLIM2-204ENST00000397760 DLK1P80370 383 aa15.68■□□□□ 0.1
PDLIM2-204ENST00000397760 TNFRSF9Q07011 255 aa15.68■□□□□ 0.1
PDLIM2-204ENST00000397760 TMEM41BQ5BJD5 291 aa15.68■□□□□ 0.1
PDLIM2-204ENST00000397760 PNKDQ8N490 385 aa15.68■□□□□ 0.1
PDLIM2-204ENST00000397760 PCP4L1A6NKN8 68 aa15.68■□□□□ 0.1
PDLIM2-204ENST00000397760 ARHGAP32A7KAX9 2087 aa15.68■□□□□ 0.1
PDLIM2-204ENST00000397760 IFNA1P01562 189 aa15.68■□□□□ 0.1
PDLIM2-204ENST00000397760 IAPPP10997 89 aa15.68■□□□□ 0.1
PDLIM2-204ENST00000397760 CTAG1AP78358 180 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms