RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 MUC15Q8N387 334 aa4.21□□□□□ -1.73
SSR1-202ENST00000397511 RFESDQ8TAC1 157 aa4.21□□□□□ -1.73
SSR1-202ENST00000397511 APOBEC3DQ96AK3 386 aaPredicted RBP4.21□□□□□ -1.73
SSR1-202ENST00000397511 FAM234AQ9H0X4 552 aa4.21□□□□□ -1.73
SSR1-202ENST00000397511 WNT9BO14905 357 aa4.21□□□□□ -1.74
SSR1-202ENST00000397511 RAMP3O60896 148 aa4.21□□□□□ -1.74
SSR1-202ENST00000397511 ARG2P78540 354 aa4.21□□□□□ -1.74
SSR1-202ENST00000397511 ID3Q02535 119 aa4.21□□□□□ -1.74
SSR1-202ENST00000397511 ZNF816Q0VGE8 651 aaPredicted RBP4.21□□□□□ -1.74
SSR1-202ENST00000397511 SCGB2A2Q13296 93 aa4.21□□□□□ -1.74
SSR1-202ENST00000397511 RNFT1Q5M7Z0 435 aa4.21□□□□□ -1.74
SSR1-202ENST00000397511 AMMECR1LQ6DCA0 310 aa4.21□□□□□ -1.74
SSR1-202ENST00000397511 ASCL4Q6XD76 172 aa4.21□□□□□ -1.74
SSR1-202ENST00000397511 TCF24Q7RTU0 167 aa4.21□□□□□ -1.74
SSR1-202ENST00000397511 ERASQ7Z444 233 aa4.21□□□□□ -1.74
SSR1-202ENST00000397511 MDP1Q86V88 176 aa4.21□□□□□ -1.74
SSR1-202ENST00000397511 WFDC8Q8IUA0 241 aa4.21□□□□□ -1.74
SSR1-202ENST00000397511 FAM58AQ8N1B3 248 aa4.21□□□□□ -1.74
SSR1-202ENST00000397511 CNEP1R1Q8N9A8 125 aa4.21□□□□□ -1.74
SSR1-202ENST00000397511 BORCS7Q96B45 105 aa4.21□□□□□ -1.74
SSR1-202ENST00000397511 GUCD1Q96NT3 240 aa4.21□□□□□ -1.74
SSR1-202ENST00000397511 FAM173AQ9BQD7 235 aa4.21□□□□□ -1.74
SSR1-202ENST00000397511 LRFN3Q9BTN0 628 aa4.21□□□□□ -1.74
SSR1-202ENST00000397511 PRDM14Q9GZV8 571 aa4.21□□□□□ -1.74
SSR1-202ENST00000397511 TAAR3PQ9P1P4 343 aa4.21□□□□□ -1.74
SSR1-202ENST00000397511 B4GALT7Q9UBV7 327 aa4.21□□□□□ -1.74
SSR1-202ENST00000397511 TRAV9-1A0A075B6T8 112 aa4.21□□□□□ -1.74
SSR1-202ENST00000397511 ODAMA1E959 279 aa4.21□□□□□ -1.74
SSR1-202ENST00000397511 C17orf112F2Z3M2 114 aa4.21□□□□□ -1.74
SSR1-202ENST00000397511 MLNRO43193 412 aa4.21□□□□□ -1.74
SSR1-202ENST00000397511 NAPSAO96009 420 aa4.21□□□□□ -1.74
SSR1-202ENST00000397511 WNT2P09544 360 aa4.21□□□□□ -1.74
SSR1-202ENST00000397511 PMCHP20382 165 aa4.21□□□□□ -1.74
SSR1-202ENST00000397511 KITLGP21583 273 aa4.21□□□□□ -1.74
SSR1-202ENST00000397511 VDAC1P21796 283 aa4.21□□□□□ -1.74
SSR1-202ENST00000397511 CBLN1P23435 193 aa4.21□□□□□ -1.74
SSR1-202ENST00000397511 F2RP25116 425 aa4.21□□□□□ -1.74
SSR1-202ENST00000397511 PRRX1P54821 245 aa4.21□□□□□ -1.74
SSR1-202ENST00000397511 HLA-DRB5Q30154 266 aa4.21□□□□□ -1.74
SSR1-202ENST00000397511 PCSK4Q6UW60 755 aa4.21□□□□□ -1.74
SSR1-202ENST00000397511 TMEM186Q96B77 213 aa4.21□□□□□ -1.74
SSR1-202ENST00000397511 GMPPAQ96IJ6 420 aaPredicted RBP4.21□□□□□ -1.74
SSR1-202ENST00000397511 KCNS1Q96KK3 526 aa4.21□□□□□ -1.74
SSR1-202ENST00000397511 POM121L2Q96KW2 1035 aa4.21□□□□□ -1.74
SSR1-202ENST00000397511 UHRF2Q96PU4 802 aa4.21□□□□□ -1.74
SSR1-202ENST00000397511 WNT10AQ9GZT5 417 aa4.21□□□□□ -1.74
SSR1-202ENST00000397511 DLL3Q9NYJ7 618 aa4.21□□□□□ -1.74
SSR1-202ENST00000397511 INTS1Q8N201 2190 aaKnown RBP4.21□□□□□ -1.74
SSR1-202ENST00000397511 PKDREJQ9NTG1 2253 aa4.2□□□□□ -1.74
SSR1-202ENST00000397511 FCN1O00602 326 aa4.2□□□□□ -1.74
SSR1-202ENST00000397511 TAX1BP3O14907 124 aa4.2□□□□□ -1.74
SSR1-202ENST00000397511 RBFOX2O43251 390 aaKnown RBP eCLIP4.2□□□□□ -1.74
SSR1-202ENST00000397511 SCGB1A1P11684 91 aa4.2□□□□□ -1.74
SSR1-202ENST00000397511 FABP6P51161 128 aa4.2□□□□□ -1.74
SSR1-202ENST00000397511 HBG1P69891 147 aa4.2□□□□□ -1.74
SSR1-202ENST00000397511 HBG2P69892 147 aa4.2□□□□□ -1.74
SSR1-202ENST00000397511 ZNF90Q03938 601 aa4.2□□□□□ -1.74
SSR1-202ENST00000397511 AESQ08117 197 aa4.2□□□□□ -1.74
SSR1-202ENST00000397511 ARL16Q0P5N6 197 aa4.2□□□□□ -1.74
SSR1-202ENST00000397511 EIF3IQ13347 325 aaKnown RBP4.2□□□□□ -1.74
SSR1-202ENST00000397511 C19orf35Q6ZS72 473 aa4.2□□□□□ -1.74
SSR1-202ENST00000397511 Q6ZSR3 168 aa4.2□□□□□ -1.74
SSR1-202ENST00000397511 WDR86Q86TI4 376 aa4.2□□□□□ -1.74
SSR1-202ENST00000397511 UBALD2Q8IYN6 164 aa4.2□□□□□ -1.74
SSR1-202ENST00000397511 OR5P3Q8WZ94 311 aa4.2□□□□□ -1.74
SSR1-202ENST00000397511 STRADBQ9C0K7 418 aa4.2□□□□□ -1.74
SSR1-202ENST00000397511 OBP2BQ9NPH6 170 aa4.2□□□□□ -1.74
SSR1-202ENST00000397511 TMEM160Q9NX00 188 aa4.2□□□□□ -1.74
SSR1-202ENST00000397511 OR2W1Q9Y3N9 320 aa4.2□□□□□ -1.74
SSR1-202ENST00000397511 RNF114Q9Y508 228 aa4.2□□□□□ -1.74
SSR1-202ENST00000397511 NBASA2RRP1 2371 aa4.2□□□□□ -1.74
SSR1-202ENST00000397511 TRAV9-2A0A087WT02 112 aa4.2□□□□□ -1.74
SSR1-202ENST00000397511 KIR2DS1A0A191URI9 304 aa4.2□□□□□ -1.74
SSR1-202ENST00000397511 OR2T8A6NH00 312 aa4.2□□□□□ -1.74
SSR1-202ENST00000397511 G3V4G9 280 aa4.2□□□□□ -1.74
SSR1-202ENST00000397511 M0R1X1 148 aa4.2□□□□□ -1.74
SSR1-202ENST00000397511 DNPH1O43598 174 aa4.2□□□□□ -1.74
SSR1-202ENST00000397511 S1PR2O95136 353 aa4.2□□□□□ -1.74
SSR1-202ENST00000397511 OR2H2O95918 312 aa4.2□□□□□ -1.74
SSR1-202ENST00000397511 IGKV1-39P01597 117 aa4.2□□□□□ -1.74
SSR1-202ENST00000397511 IGKV1D-39P04432 117 aa4.2□□□□□ -1.74
SSR1-202ENST00000397511 REG1AP05451 166 aa4.2□□□□□ -1.74
SSR1-202ENST00000397511 C3orf79P0CE67 100 aa4.2□□□□□ -1.74
SSR1-202ENST00000397511 COL8A2P25067 703 aa4.2□□□□□ -1.74
SSR1-202ENST00000397511 G6PCP35575 357 aa4.2□□□□□ -1.74
SSR1-202ENST00000397511 KIR2DS4P43632 304 aa4.2□□□□□ -1.74
SSR1-202ENST00000397511 PAX9P55771 341 aa4.2□□□□□ -1.74
SSR1-202ENST00000397511 KIR2DS1Q14954 304 aa4.2□□□□□ -1.74
SSR1-202ENST00000397511 LRRC75BQ2VPJ9 315 aa4.2□□□□□ -1.74
SSR1-202ENST00000397511 NMSQ5H8A3 153 aa4.2□□□□□ -1.74
SSR1-202ENST00000397511 COLCA1Q6ZS62 124 aa4.2□□□□□ -1.74
SSR1-202ENST00000397511 OR10P1Q8NGE3 313 aa4.2□□□□□ -1.74
SSR1-202ENST00000397511 OR10V1Q8NGI7 309 aa4.2□□□□□ -1.74
SSR1-202ENST00000397511 SPSB4Q96A44 273 aa4.2□□□□□ -1.74
SSR1-202ENST00000397511 SFRP2Q96HF1 295 aa4.2□□□□□ -1.74
SSR1-202ENST00000397511 RAB40CQ96S21 281 aa4.2□□□□□ -1.74
SSR1-202ENST00000397511 IL36GQ9NZH8 169 aa4.2□□□□□ -1.74
SSR1-202ENST00000397511 PLCE1Q9P212 2302 aa4.2□□□□□ -1.74
SSR1-202ENST00000397511 SAA2-SAA4A0A096LPE2 208 aa4.19□□□□□ -1.74
SSR1-202ENST00000397511 TRBV9A0A0B4J1U6 114 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms