RNA–Protein interactions for RNA: ENST00000396854.8

TM9SF1-202, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM9SF1, Length 2,055 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-202ENST00000396854 LINC01356Q8N9X3 169 aa12.09□□□□□ -0.47
TM9SF1-202ENST00000396854 FAM216AQ8WUB2 273 aa12.09□□□□□ -0.47
TM9SF1-202ENST00000396854 LPAR2Q9HBW0 351 aa12.09□□□□□ -0.47
TM9SF1-202ENST00000396854 GNG12Q9UBI6 72 aa12.09□□□□□ -0.47
TM9SF1-202ENST00000396854 ITGB1BP1O14713 200 aa12.08□□□□□ -0.48
TM9SF1-202ENST00000396854 ARF6P62330 175 aa12.08□□□□□ -0.48
TM9SF1-202ENST00000396854 TMEM249Q2WGJ8 235 aa12.08□□□□□ -0.48
TM9SF1-202ENST00000396854 KHDC3LQ587J8 217 aa12.08□□□□□ -0.48
TM9SF1-202ENST00000396854 FAM53AQ6NSI3 398 aaPredicted RBP12.08□□□□□ -0.48
TM9SF1-202ENST00000396854 Q6ZRM9 215 aa12.08□□□□□ -0.48
TM9SF1-202ENST00000396854 MAPK1IP1LQ8NDC0 245 aa12.08□□□□□ -0.48
TM9SF1-202ENST00000396854 OR10G4Q8NGN3 311 aa12.08□□□□□ -0.48
TM9SF1-202ENST00000396854 TCEAL7Q9BRU2 100 aa12.08□□□□□ -0.48
TM9SF1-202ENST00000396854 SIRPDQ9H106 197 aa12.08□□□□□ -0.48
TM9SF1-202ENST00000396854 CCDC168Q8NDH2 2452 aa12.08□□□□□ -0.48
TM9SF1-202ENST00000396854 ITPR3Q14573 2671 aa12.08□□□□□ -0.48
TM9SF1-202ENST00000396854 TRAV20A0A0B4J274 112 aa12.07□□□□□ -0.48
TM9SF1-202ENST00000396854 PAX8Q06710 450 aa12.07□□□□□ -0.48
TM9SF1-202ENST00000396854 TMEM267Q0VDI3 215 aaPredicted RBP12.07□□□□□ -0.48
TM9SF1-202ENST00000396854 FABP9Q0Z7S8 132 aa12.07□□□□□ -0.48
TM9SF1-202ENST00000396854 RNASE11Q8TAA1 199 aaKnown RBP12.07□□□□□ -0.48
TM9SF1-202ENST00000396854 EDARADDQ8WWZ3 215 aa12.07□□□□□ -0.48
TM9SF1-202ENST00000396854 LIN7CQ9NUP9 197 aaKnown RBP12.07□□□□□ -0.48
TM9SF1-202ENST00000396854 CACNG5Q9UF02 275 aa12.07□□□□□ -0.48
TM9SF1-202ENST00000396854 SYNGR2O43760 224 aa12.07□□□□□ -0.48
TM9SF1-202ENST00000396854 IFNA17P01571 189 aa12.07□□□□□ -0.48
TM9SF1-202ENST00000396854 IGHV4-31P0DP07 118 aa12.07□□□□□ -0.48
TM9SF1-202ENST00000396854 PRTN3P24158 256 aa12.07□□□□□ -0.48
TM9SF1-202ENST00000396854 UTF1Q5T230 341 aa12.07□□□□□ -0.48
TM9SF1-202ENST00000396854 ZNF429Q86V71 674 aa12.07□□□□□ -0.48
TM9SF1-202ENST00000396854 THNSL2Q86YJ6 484 aa12.07□□□□□ -0.48
TM9SF1-202ENST00000396854 CYB561D1Q8N8Q1 229 aa12.07□□□□□ -0.48
TM9SF1-202ENST00000396854 ZNF439Q8NDP4 499 aa12.07□□□□□ -0.48
TM9SF1-202ENST00000396854 TMEM133Q9H2Q1 129 aa12.07□□□□□ -0.48
TM9SF1-202ENST00000396854 WNK2Q9Y3S1 2297 aa12.07□□□□□ -0.48
TM9SF1-202ENST00000396854 LOC102723971A0A1B0GUV8 181 aa12.06□□□□□ -0.48
TM9SF1-202ENST00000396854 H3BP45 60 aa12.06□□□□□ -0.48
TM9SF1-202ENST00000396854 IGKV1-5P01602 117 aa12.06□□□□□ -0.48
TM9SF1-202ENST00000396854 S100A9P06702 114 aaKnown RBP12.06□□□□□ -0.48
TM9SF1-202ENST00000396854 OR8U8P0C7N1 319 aa12.06□□□□□ -0.48
TM9SF1-202ENST00000396854 GATA3P23771 443 aa12.06□□□□□ -0.48
TM9SF1-202ENST00000396854 RBMS3Q6XE24 437 aaKnown RBP12.06□□□□□ -0.48
TM9SF1-202ENST00000396854 ZNF645Q8N7E2 425 aa12.06□□□□□ -0.48
TM9SF1-202ENST00000396854 C8orf31Q8N9H6 132 aa12.06□□□□□ -0.48
TM9SF1-202ENST00000396854 ZBTB34Q8NCN2 500 aa12.06□□□□□ -0.48
TM9SF1-202ENST00000396854 TMEM186Q96B77 213 aa12.06□□□□□ -0.48
TM9SF1-202ENST00000396854 TVP23CQ96ET8 276 aa12.06□□□□□ -0.48
TM9SF1-202ENST00000396854 PSMG3Q9BT73 122 aaPredicted RBP12.06□□□□□ -0.48
TM9SF1-202ENST00000396854 ZNF469Q96JG9 3925 aaPredicted RBP12.06□□□□□ -0.48
TM9SF1-202ENST00000396854 AP4M1O00189 453 aa12.06□□□□□ -0.48
TM9SF1-202ENST00000396854 TAGLN2P37802 199 aaKnown RBP12.06□□□□□ -0.48
TM9SF1-202ENST00000396854 OR2B8PP59922 312 aa12.06□□□□□ -0.48
TM9SF1-202ENST00000396854 UBE2KP61086 200 aa12.06□□□□□ -0.48
TM9SF1-202ENST00000396854 IZUMO4Q1ZYL8 232 aa12.06□□□□□ -0.48
TM9SF1-202ENST00000396854 ZNF585BQ52M93 769 aa12.06□□□□□ -0.48
TM9SF1-202ENST00000396854 SLC25A24Q6NUK1 477 aa12.06□□□□□ -0.48
TM9SF1-202ENST00000396854 SLC35E3Q7Z769 313 aa12.06□□□□□ -0.48
TM9SF1-202ENST00000396854 ZNF596Q8TC21 504 aa12.06□□□□□ -0.48
TM9SF1-202ENST00000396854 RNF150Q9ULK6 438 aa12.06□□□□□ -0.48
TM9SF1-202ENST00000396854 KCNS2Q9ULS6 477 aa12.06□□□□□ -0.48
TM9SF1-202ENST00000396854 RBM7Q9Y580 266 aaKnown RBP12.06□□□□□ -0.48
TM9SF1-202ENST00000396854 ZNF134P52741 427 aa12.05□□□□□ -0.48
TM9SF1-202ENST00000396854 DLK1P80370 383 aa12.05□□□□□ -0.48
TM9SF1-202ENST00000396854 CIARTQ8N365 385 aaPredicted RBP12.05□□□□□ -0.48
TM9SF1-202ENST00000396854 DRAM1Q8N682 238 aa12.05□□□□□ -0.48
TM9SF1-202ENST00000396854 SCGB1C1Q8TD33 95 aa12.05□□□□□ -0.48
TM9SF1-202ENST00000396854 TNFRSF14Q92956 283 aa12.05□□□□□ -0.48
TM9SF1-202ENST00000396854 LEAP2Q969E1 77 aa12.05□□□□□ -0.48
TM9SF1-202ENST00000396854 ZNF251Q9BRH9 671 aa12.05□□□□□ -0.48
TM9SF1-202ENST00000396854 NIPSNAP3BQ9BS92 247 aa12.05□□□□□ -0.48
TM9SF1-202ENST00000396854 AGMATQ9BSE5 352 aa12.05□□□□□ -0.48
TM9SF1-202ENST00000396854 PARD6GQ9BYG4 376 aaPredicted RBP12.05□□□□□ -0.48
TM9SF1-202ENST00000396854 SIRT7Q9NRC8 400 aa12.05□□□□□ -0.48
TM9SF1-202ENST00000396854 HIF1ANQ9NWT6 349 aa12.05□□□□□ -0.48
TM9SF1-202ENST00000396854 PSENENQ9NZ42 101 aa12.05□□□□□ -0.48
TM9SF1-202ENST00000396854 PSG11Q9UQ72 335 aa12.05□□□□□ -0.48
TM9SF1-202ENST00000396854 CXorf65A6NEN9 183 aa12.04□□□□□ -0.48
TM9SF1-202ENST00000396854 TOX4O94842 621 aa12.04□□□□□ -0.48
TM9SF1-202ENST00000396854 FBP1P09467 338 aa12.04□□□□□ -0.48
TM9SF1-202ENST00000396854 RAB7AP51149 207 aa12.04□□□□□ -0.48
TM9SF1-202ENST00000396854 EIF4EBP1Q13541 118 aaPredicted RBP12.04□□□□□ -0.48
TM9SF1-202ENST00000396854 SLC25A48Q6ZT89 311 aaKnown RBP12.04□□□□□ -0.48
TM9SF1-202ENST00000396854 VMO1Q7Z5L0 202 aa12.04□□□□□ -0.48
TM9SF1-202ENST00000396854 HAPLN4Q86UW8 402 aa12.04□□□□□ -0.48
TM9SF1-202ENST00000396854 LINC00311Q8N616 119 aa12.04□□□□□ -0.48
TM9SF1-202ENST00000396854 OR9G1Q8NH87 305 aa12.04□□□□□ -0.48
TM9SF1-202ENST00000396854 NANPQ8TBE9 248 aa12.04□□□□□ -0.48
TM9SF1-202ENST00000396854 MBD3L1Q8WWY6 194 aa12.04□□□□□ -0.48
TM9SF1-202ENST00000396854 TBX15Q96SF7 602 aa12.04□□□□□ -0.48
TM9SF1-202ENST00000396854 CREBBPQ92793 2442 aa12.04□□□□□ -0.48
TM9SF1-202ENST00000396854 IGHV2-26A0A0B4J1V2 119 aa12.04□□□□□ -0.48
TM9SF1-202ENST00000396854 RNF212BA8MTL3 300 aa12.04□□□□□ -0.48
TM9SF1-202ENST00000396854 NQO2P16083 231 aa12.04□□□□□ -0.48
TM9SF1-202ENST00000396854 CEBPGP53567 150 aa12.04□□□□□ -0.48
TM9SF1-202ENST00000396854 HBG1P69891 147 aa12.04□□□□□ -0.48
TM9SF1-202ENST00000396854 HBG2P69892 147 aa12.04□□□□□ -0.48
TM9SF1-202ENST00000396854 ARL16Q0P5N6 197 aa12.04□□□□□ -0.48
TM9SF1-202ENST00000396854 CT45A1Q5HYN5 189 aa12.04□□□□□ -0.48
TM9SF1-202ENST00000396854 SLC16A13Q7RTY0 426 aa12.04□□□□□ -0.48
TM9SF1-202ENST00000396854 ABHD12Q8N2K0 398 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms