RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 OR8H1Q8NGG4 311 aa10.19□□□□□ -0.78
TRIM39-204ENST00000396548 TMEM170AQ8WVE7 144 aa10.19□□□□□ -0.78
TRIM39-204ENST00000396548 SLC25A31Q9H0C2 315 aa10.19□□□□□ -0.78
TRIM39-204ENST00000396548 OR51B2Q9Y5P1 312 aa10.19□□□□□ -0.78
TRIM39-204ENST00000396548 IGHV4-31P0DP07 118 aa10.18□□□□□ -0.78
TRIM39-204ENST00000396548 SSBP2P81877 361 aaPredicted RBP10.18□□□□□ -0.78
TRIM39-204ENST00000396548 SPINK9Q5DT21 86 aa10.18□□□□□ -0.78
TRIM39-204ENST00000396548 NDUFA4L2Q9NRX3 87 aa10.18□□□□□ -0.78
TRIM39-204ENST00000396548 HIF1ANQ9NWT6 349 aa10.18□□□□□ -0.78
TRIM39-204ENST00000396548 IGHV1-69DA0A0B4J2H0 117 aa10.18□□□□□ -0.78
TRIM39-204ENST00000396548 E7EUB6 86 aa10.18□□□□□ -0.78
TRIM39-204ENST00000396548 INS-IGF2F8WCM5 200 aa10.18□□□□□ -0.78
TRIM39-204ENST00000396548 NDUFA3O95167 84 aa10.18□□□□□ -0.78
TRIM39-204ENST00000396548 IGHV1-69P01742 117 aa10.18□□□□□ -0.78
TRIM39-204ENST00000396548 SULT1A1P50225 295 aa10.18□□□□□ -0.78
TRIM39-204ENST00000396548 CAV2P51636 162 aa10.18□□□□□ -0.78
TRIM39-204ENST00000396548 PRCDQ00LT1 54 aa10.18□□□□□ -0.78
TRIM39-204ENST00000396548 SSX2Q16385 188 aa10.18□□□□□ -0.78
TRIM39-204ENST00000396548 RPL7L1Q6DKI1 246 aaKnown RBP10.18□□□□□ -0.78
TRIM39-204ENST00000396548 VSTM2AQ8TAG5 236 aa10.18□□□□□ -0.78
TRIM39-204ENST00000396548 Q96MF0 132 aa10.18□□□□□ -0.78
TRIM39-204ENST00000396548 AUP1Q9Y679 476 aa10.18□□□□□ -0.78
TRIM39-204ENST00000396548 H3BP45 60 aa10.18□□□□□ -0.78
TRIM39-204ENST00000396548 BSXQ3C1V8 233 aa10.18□□□□□ -0.78
TRIM39-204ENST00000396548 KLF17Q5JT82 389 aaPredicted RBP10.18□□□□□ -0.78
TRIM39-204ENST00000396548 CCDC144NLQ6NUI1 221 aa10.18□□□□□ -0.78
TRIM39-204ENST00000396548 CIB3Q96Q77 187 aaPredicted RBP10.18□□□□□ -0.78
TRIM39-204ENST00000396548 ZNF430Q9H8G1 570 aaPredicted RBP10.18□□□□□ -0.78
TRIM39-204ENST00000396548 C15orf62A8K5M9 175 aa10.17□□□□□ -0.78
TRIM39-204ENST00000396548 F2RL1P55085 397 aa10.17□□□□□ -0.78
TRIM39-204ENST00000396548 UBAC2Q8NBM4 344 aa10.17□□□□□ -0.78
TRIM39-204ENST00000396548 OR5B3Q8NH48 314 aa10.17□□□□□ -0.78
TRIM39-204ENST00000396548 FKBP11Q9NYL4 201 aa10.17□□□□□ -0.78
TRIM39-204ENST00000396548 SIGLEC9Q9Y336 463 aa10.17□□□□□ -0.78
TRIM39-204ENST00000396548 UNC79Q9P2D8 2635 aa10.17□□□□□ -0.78
TRIM39-204ENST00000396548 PRSS46E5RG02 174 aa10.17□□□□□ -0.78
TRIM39-204ENST00000396548 SLC25A17O43808 307 aa10.17□□□□□ -0.78
TRIM39-204ENST00000396548 SPDEFO95238 335 aa10.17□□□□□ -0.78
TRIM39-204ENST00000396548 LY86O95711 162 aa10.17□□□□□ -0.78
TRIM39-204ENST00000396548 S100A1P23297 94 aa10.17□□□□□ -0.78
TRIM39-204ENST00000396548 DYNLT3P51808 116 aa10.17□□□□□ -0.78
TRIM39-204ENST00000396548 RPL8P62917 257 aaKnown RBP10.17□□□□□ -0.78
TRIM39-204ENST00000396548 TMEM267Q0VDI3 215 aaPredicted RBP10.17□□□□□ -0.78
TRIM39-204ENST00000396548 PJVKQ0ZLH3 352 aa10.17□□□□□ -0.78
TRIM39-204ENST00000396548 PHYHIPLQ96FC7 376 aa10.17□□□□□ -0.78
TRIM39-204ENST00000396548 EAF1Q96JC9 268 aaPredicted RBP10.17□□□□□ -0.78
TRIM39-204ENST00000396548 ZNF471Q9BX82 626 aaPredicted RBP10.17□□□□□ -0.78
TRIM39-204ENST00000396548 ZANQ9Y493 2812 aa10.17□□□□□ -0.78
TRIM39-204ENST00000396548 CST7O76096 145 aa10.16□□□□□ -0.78
TRIM39-204ENST00000396548 MOSP00540 346 aa10.16□□□□□ -0.78
TRIM39-204ENST00000396548 IFNA17P01571 189 aa10.16□□□□□ -0.78
TRIM39-204ENST00000396548 IGHV4-38-2P0DP08 117 aa10.16□□□□□ -0.78
TRIM39-204ENST00000396548 VMA21Q3ZAQ7 101 aa10.16□□□□□ -0.78
TRIM39-204ENST00000396548 RUSC1-AS1Q66K80 236 aa10.16□□□□□ -0.78
TRIM39-204ENST00000396548 MAPK1IP1LQ8NDC0 245 aa10.16□□□□□ -0.78
TRIM39-204ENST00000396548 CEBPZOSA8MTT3 80 aa10.16□□□□□ -0.78
TRIM39-204ENST00000396548 IGKV1D-33P01593 117 aa10.16□□□□□ -0.78
TRIM39-204ENST00000396548 IGKV1-33P01594 117 aa10.16□□□□□ -0.78
TRIM39-204ENST00000396548 SNRNP70P08621 437 aaKnown RBP10.16□□□□□ -0.78
TRIM39-204ENST00000396548 LGALS4P56470 323 aa10.16□□□□□ -0.78
TRIM39-204ENST00000396548 PRSS8Q16651 343 aa10.16□□□□□ -0.78
TRIM39-204ENST00000396548 TSNAXQ99598 290 aaKnown RBP10.16□□□□□ -0.78
TRIM39-204ENST00000396548 SMIM3Q9BZL3 60 aa10.16□□□□□ -0.78
TRIM39-204ENST00000396548 C7orf69Q9H7B7 122 aa10.16□□□□□ -0.78
TRIM39-204ENST00000396548 RPS10-NUDT3A0A1W2PQS6 291 aa10.16□□□□□ -0.78
TRIM39-204ENST00000396548 RBMXL2O75526 392 aaKnown RBP10.16□□□□□ -0.78
TRIM39-204ENST00000396548 IFNA7P01567 189 aa10.16□□□□□ -0.78
TRIM39-204ENST00000396548 TMEM249Q2WGJ8 235 aa10.16□□□□□ -0.78
TRIM39-204ENST00000396548 SPANXN5Q5MJ07 72 aa10.16□□□□□ -0.78
TRIM39-204ENST00000396548 FAM120AOSQ5T036 256 aa10.16□□□□□ -0.78
TRIM39-204ENST00000396548 BAP18Q8IXM2 172 aa10.16□□□□□ -0.78
TRIM39-204ENST00000396548 OR5C1Q8NGR4 320 aa10.16□□□□□ -0.78
TRIM39-204ENST00000396548 GINS3Q9BRX5 216 aa10.16□□□□□ -0.78
TRIM39-204ENST00000396548 MEGF9Q9H1U4 602 aa10.16□□□□□ -0.78
TRIM39-204ENST00000396548 PLA2G2EQ9NZK7 142 aa10.16□□□□□ -0.78
TRIM39-204ENST00000396548 ITPR2Q14571 2701 aa10.15□□□□□ -0.78
TRIM39-204ENST00000396548 J3QLI3 93 aa10.15□□□□□ -0.78
TRIM39-204ENST00000396548 JTBO76095 146 aa10.15□□□□□ -0.78
TRIM39-204ENST00000396548 FSHBP01225 129 aa10.15□□□□□ -0.78
TRIM39-204ENST00000396548 METTL15P1P0C7V9 234 aa10.15□□□□□ -0.78
TRIM39-204ENST00000396548 SCARB1Q8WTV0 552 aa10.15□□□□□ -0.78
TRIM39-204ENST00000396548 FOXC2Q99958 501 aa10.15□□□□□ -0.78
TRIM39-204ENST00000396548 NUP50Q9UKX7 468 aa10.15□□□□□ -0.78
TRIM39-204ENST00000396548 PRRC2AP48634 2157 aaKnown RBP10.15□□□□□ -0.78
TRIM39-204ENST00000396548 TRAV40A0A0B4J280 105 aa10.15□□□□□ -0.78
TRIM39-204ENST00000396548 RRHO14718 337 aa10.15□□□□□ -0.78
TRIM39-204ENST00000396548 TPT1P13693 172 aaKnown RBP10.15□□□□□ -0.78
TRIM39-204ENST00000396548 CD24P25063 80 aa10.15□□□□□ -0.78
TRIM39-204ENST00000396548 VWC2Q2TAL6 325 aa10.15□□□□□ -0.78
TRIM39-204ENST00000396548 ALKAL2Q6UX46 152 aa10.15□□□□□ -0.78
TRIM39-204ENST00000396548 PIFOQ8TCI5 191 aa10.15□□□□□ -0.78
TRIM39-204ENST00000396548 UBQLN2Q9UHD9 624 aa10.15□□□□□ -0.78
TRIM39-204ENST00000396548 MDKP21741 143 aaPredicted RBP10.14□□□□□ -0.79
TRIM39-204ENST00000396548 MAS1LP35410 378 aa10.14□□□□□ -0.79
TRIM39-204ENST00000396548 PPP1R27Q86WC6 154 aa10.14□□□□□ -0.79
TRIM39-204ENST00000396548 WFDC11Q8NEX6 87 aa10.14□□□□□ -0.79
TRIM39-204ENST00000396548 OR2T10Q8NGZ9 312 aa10.14□□□□□ -0.79
TRIM39-204ENST00000396548 ZC4H2Q9NQZ6 224 aa10.14□□□□□ -0.79
TRIM39-204ENST00000396548 STRAPQ9Y3F4 350 aaKnown RBP10.14□□□□□ -0.79
TRIM39-204ENST00000396548 MED13LQ71F56 2210 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms