RNA–Protein interactions for RNA: ENST00000395198.7

HERC4-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERC4, Length 4,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-204ENST00000395198 WDR13Q9H1Z4 485 aa3.42□□□□□ -1.86
HERC4-204ENST00000395198 SPANXCQ9NY87 97 aa3.42□□□□□ -1.86
HERC4-204ENST00000395198 FKBP11Q9NYL4 201 aa3.42□□□□□ -1.86
HERC4-204ENST00000395198 RAI1Q7Z5J4 1906 aaPredicted RBP3.42□□□□□ -1.86
HERC4-204ENST00000395198 KMT2EQ8IZD2 1858 aa3.42□□□□□ -1.86
HERC4-204ENST00000395198 TRBV5-5A0A0J9YX44 114 aa3.41□□□□□ -1.86
HERC4-204ENST00000395198 LOC101059948A0A1B0GTJ6 334 aa3.41□□□□□ -1.86
HERC4-204ENST00000395198 IGLC7A0M8Q6 106 aa3.41□□□□□ -1.86
HERC4-204ENST00000395198 F6UB75 175 aa3.41□□□□□ -1.86
HERC4-204ENST00000395198 REM1O75628 298 aa3.41□□□□□ -1.86
HERC4-204ENST00000395198 DHRS3O75911 302 aa3.41□□□□□ -1.86
HERC4-204ENST00000395198 ATP5G3P48201 142 aa3.41□□□□□ -1.86
HERC4-204ENST00000395198 RPS21P63220 83 aaKnown RBP3.41□□□□□ -1.86
HERC4-204ENST00000395198 OPCMLQ14982 345 aa3.41□□□□□ -1.86
HERC4-204ENST00000395198 ELOCQ15369 112 aa3.41□□□□□ -1.86
HERC4-204ENST00000395198 C12orf74Q32Q52 190 aa3.41□□□□□ -1.86
HERC4-204ENST00000395198 FAM78AQ5JUQ0 283 aa3.41□□□□□ -1.86
HERC4-204ENST00000395198 Q6ZRU5 148 aa3.41□□□□□ -1.86
HERC4-204ENST00000395198 Q6ZUT4 128 aa3.41□□□□□ -1.86
HERC4-204ENST00000395198 C3orf22Q8N5N4 141 aa3.41□□□□□ -1.86
HERC4-204ENST00000395198 ZNF441Q8N8Z8 693 aa3.41□□□□□ -1.86
HERC4-204ENST00000395198 TMEM125Q96AQ2 219 aa3.41□□□□□ -1.86
HERC4-204ENST00000395198 PITX2Q99697 317 aa3.41□□□□□ -1.86
HERC4-204ENST00000395198 SIX2Q9NPC8 291 aa3.41□□□□□ -1.86
HERC4-204ENST00000395198 RPUSD1Q9UJJ7 312 aaKnown RBP3.41□□□□□ -1.86
HERC4-204ENST00000395198 TIAM2Q8IVF5 1701 aa3.41□□□□□ -1.86
HERC4-204ENST00000395198 LPAR6P43657 344 aa3.41□□□□□ -1.86
HERC4-204ENST00000395198 NMUP48645 174 aa3.41□□□□□ -1.86
HERC4-204ENST00000395198 ZNF85Q03923 595 aa3.41□□□□□ -1.86
HERC4-204ENST00000395198 TMEM30BQ3MIR4 351 aa3.41□□□□□ -1.86
HERC4-204ENST00000395198 TMEM207Q6UWW9 146 aa3.41□□□□□ -1.86
HERC4-204ENST00000395198 DEFB125Q8N687 156 aa3.41□□□□□ -1.86
HERC4-204ENST00000395198 C10orf82Q8WW14 230 aa3.41□□□□□ -1.86
HERC4-204ENST00000395198 ACY3Q96HD9 319 aa3.41□□□□□ -1.86
HERC4-204ENST00000395198 RERGLQ9H628 205 aa3.41□□□□□ -1.86
HERC4-204ENST00000395198 AKTIPQ9H8T0 292 aa3.41□□□□□ -1.86
HERC4-204ENST00000395198 POLR2AP24928 1970 aaKnown RBP3.41□□□□□ -1.86
HERC4-204ENST00000395198 FER1L6Q2WGJ9 1857 aa3.41□□□□□ -1.86
HERC4-204ENST00000395198 CCDC88CQ9P219 2028 aa3.41□□□□□ -1.86
HERC4-204ENST00000395198 A0A0J9YW62 118 aa3.41□□□□□ -1.86
HERC4-204ENST00000395198 YPEL1O60688 119 aa3.41□□□□□ -1.86
HERC4-204ENST00000395198 MRPL3P09001 348 aaKnown RBP3.41□□□□□ -1.86
HERC4-204ENST00000395198 OR9G9P0C7N8 305 aa3.41□□□□□ -1.86
HERC4-204ENST00000395198 OR10J1P30954 320 aa3.41□□□□□ -1.86
HERC4-204ENST00000395198 S100A3P33764 101 aa3.41□□□□□ -1.86
HERC4-204ENST00000395198 PFN2P35080 140 aa3.41□□□□□ -1.86
HERC4-204ENST00000395198 P2RX1P51575 399 aa3.41□□□□□ -1.86
HERC4-204ENST00000395198 MLF2Q15773 248 aaPredicted RBP3.41□□□□□ -1.86
HERC4-204ENST00000395198 PRIMA1Q86XR5 153 aa3.41□□□□□ -1.86
HERC4-204ENST00000395198 TMEM183AQ8IXX5 376 aa3.41□□□□□ -1.86
HERC4-204ENST00000395198 OR52R1Q8NGF1 315 aa3.41□□□□□ -1.86
HERC4-204ENST00000395198 YPEL2Q96QA6 119 aa3.41□□□□□ -1.86
HERC4-204ENST00000395198 GINS4Q9BRT9 223 aa3.41□□□□□ -1.86
HERC4-204ENST00000395198 C16orf95Q9H693 158 aa3.41□□□□□ -1.86
HERC4-204ENST00000395198 BET1LQ9NYM9 111 aa3.41□□□□□ -1.86
HERC4-204ENST00000395198 HEBP2Q9Y5Z4 205 aa3.41□□□□□ -1.86
HERC4-204ENST00000395198 HELZP42694 1942 aaKnown RBP3.41□□□□□ -1.86
HERC4-204ENST00000395198 RIIAD1A6NNX1 92 aa3.41□□□□□ -1.86
HERC4-204ENST00000395198 K7EPK0 472 aa3.41□□□□□ -1.86
HERC4-204ENST00000395198 GPR137BO60478 399 aa3.41□□□□□ -1.86
HERC4-204ENST00000395198 GABARAPO95166 117 aa3.41□□□□□ -1.86
HERC4-204ENST00000395198 HRASP01112 189 aa3.41□□□□□ -1.86
HERC4-204ENST00000395198 KRASP01116 189 aa3.41□□□□□ -1.86
HERC4-204ENST00000395198 CD70P32970 193 aa3.41□□□□□ -1.86
HERC4-204ENST00000395198 ZCCHC23Q6ZST2 131 aa3.41□□□□□ -1.86
HERC4-204ENST00000395198 FAM71E2Q8N5Q1 922 aa3.41□□□□□ -1.86
HERC4-204ENST00000395198 OR51T1Q8NGJ9 327 aa3.41□□□□□ -1.86
HERC4-204ENST00000395198 OR2A12Q8NGT7 310 aa3.41□□□□□ -1.86
HERC4-204ENST00000395198 SLC25A46Q96AG3 418 aa3.41□□□□□ -1.86
HERC4-204ENST00000395198 ZNF799Q96GE5 643 aa3.41□□□□□ -1.86
HERC4-204ENST00000395198 IGF2BP2-AS1Q96M15 143 aa3.41□□□□□ -1.86
HERC4-204ENST00000395198 TRGV10A0A0A0MS01 117 aa3.4□□□□□ -1.86
HERC4-204ENST00000395198 TRAV8-6A0A0B4J262 113 aa3.4□□□□□ -1.86
HERC4-204ENST00000395198 UBL3O95164 117 aa3.4□□□□□ -1.86
HERC4-204ENST00000395198 TEDDM1Q5T9Z0 273 aa3.4□□□□□ -1.86
HERC4-204ENST00000395198 ZNF695Q8IW36 515 aa3.4□□□□□ -1.86
HERC4-204ENST00000395198 OR5D14Q8NGL3 314 aa3.4□□□□□ -1.86
HERC4-204ENST00000395198 TMEM9BQ9NQ34 198 aa3.4□□□□□ -1.86
HERC4-204ENST00000395198 TAS2R8Q9NYW2 309 aa3.4□□□□□ -1.86
HERC4-204ENST00000395198 MRPS16Q9Y3D3 137 aaKnown RBP3.4□□□□□ -1.86
HERC4-204ENST00000395198 IER3IP1Q9Y5U9 82 aa3.4□□□□□ -1.86
HERC4-204ENST00000395198 ATG2BQ96BY7 2078 aa3.4□□□□□ -1.86
HERC4-204ENST00000395198 IGKV1D-8A0A087WSZ0 117 aa3.4□□□□□ -1.87
HERC4-204ENST00000395198 ATP1B1P05026 303 aa3.4□□□□□ -1.87
HERC4-204ENST00000395198 HERVK_113P63121 156 aa3.4□□□□□ -1.87
HERC4-204ENST00000395198 CFHR3Q02985 330 aa3.4□□□□□ -1.87
HERC4-204ENST00000395198 TFF2Q03403 129 aa3.4□□□□□ -1.87
HERC4-204ENST00000395198 Q499Y3 187 aa3.4□□□□□ -1.87
HERC4-204ENST00000395198 ZNF57Q68EA5 555 aaPredicted RBP3.4□□□□□ -1.87
HERC4-204ENST00000395198 MARCH5Q9NX47 278 aa3.4□□□□□ -1.87
HERC4-204ENST00000395198 COL4A1P02462 1669 aa3.4□□□□□ -1.87
HERC4-204ENST00000395198 SPAG17Q6Q759 2223 aa3.4□□□□□ -1.87
HERC4-204ENST00000395198 PLAC8L1A1L4L8 177 aa3.4□□□□□ -1.87
HERC4-204ENST00000395198 GGT3PA6NGU5 568 aa3.4□□□□□ -1.87
HERC4-204ENST00000395198 GGTLC3B5MD39 225 aa3.4□□□□□ -1.87
HERC4-204ENST00000395198 TIMM23O14925 209 aa3.4□□□□□ -1.87
HERC4-204ENST00000395198 CCR2P41597 374 aa3.4□□□□□ -1.87
HERC4-204ENST00000395198 GFERP55789 205 aa3.4□□□□□ -1.87
HERC4-204ENST00000395198 RPL38P63173 70 aaKnown RBP3.4□□□□□ -1.87
HERC4-204ENST00000395198 SBSNQ6UWP8 590 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms