RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 RBMS3Q6XE24 437 aaKnown RBP13.1□□□□□ -0.31
SMARCD1-202ENST00000394963 RAB24Q969Q5 203 aa13.1□□□□□ -0.31
SMARCD1-202ENST00000394963 SGK494Q96LW2 274 aa13.1□□□□□ -0.31
SMARCD1-202ENST00000394963 SLX1AQ9BQ83 275 aa13.1□□□□□ -0.31
SMARCD1-202ENST00000394963 FAM103A1Q9BTL3 118 aaKnown RBP13.1□□□□□ -0.31
SMARCD1-202ENST00000394963 FGF16O43320 207 aa13.1□□□□□ -0.31
SMARCD1-202ENST00000394963 RAB5BP61020 215 aa13.1□□□□□ -0.31
SMARCD1-202ENST00000394963 ACSM6Q6P461 480 aa13.1□□□□□ -0.31
SMARCD1-202ENST00000394963 SLC24A4Q8NFF2 622 aa13.1□□□□□ -0.31
SMARCD1-202ENST00000394963 C5orf30Q96GV9 206 aa13.1□□□□□ -0.31
SMARCD1-202ENST00000394963 TUBG2Q9NRH3 451 aa13.1□□□□□ -0.31
SMARCD1-202ENST00000394963 GAB2Q9UQC2 676 aa13.1□□□□□ -0.31
SMARCD1-202ENST00000394963 B2MP61769 119 aa13.1□□□□□ -0.31
SMARCD1-202ENST00000394963 CDSNQ15517 529 aa13.1□□□□□ -0.31
SMARCD1-202ENST00000394963 OR4P4Q8NGL7 312 aa13.1□□□□□ -0.31
SMARCD1-202ENST00000394963 ZNF251Q9BRH9 671 aa13.1□□□□□ -0.31
SMARCD1-202ENST00000394963 SEC11CQ9BY50 192 aa13.1□□□□□ -0.31
SMARCD1-202ENST00000394963 BARX1Q9HBU1 254 aaPredicted RBP13.1□□□□□ -0.31
SMARCD1-202ENST00000394963 HCFC1P51610 2035 aa13.1□□□□□ -0.31
SMARCD1-202ENST00000394963 IGLV2-14P01704 120 aa13.09□□□□□ -0.31
SMARCD1-202ENST00000394963 SSUH2Q9Y2M2 353 aa13.09□□□□□ -0.31
SMARCD1-202ENST00000394963 CA2P00918 260 aa13.09□□□□□ -0.31
SMARCD1-202ENST00000394963 CRYBA1P05813 215 aa13.09□□□□□ -0.31
SMARCD1-202ENST00000394963 ACAA1P09110 424 aaPredicted RBP13.09□□□□□ -0.31
SMARCD1-202ENST00000394963 RAB4BP61018 213 aa13.09□□□□□ -0.31
SMARCD1-202ENST00000394963 DLK1P80370 383 aa13.09□□□□□ -0.31
SMARCD1-202ENST00000394963 ACOT6Q3I5F7 207 aaPredicted RBP13.09□□□□□ -0.31
SMARCD1-202ENST00000394963 WDR61Q9GZS3 305 aaKnown RBP13.09□□□□□ -0.31
SMARCD1-202ENST00000394963 A0A1W2PPQ1 181 aa13.09□□□□□ -0.31
SMARCD1-202ENST00000394963 S100A9P06702 114 aaKnown RBP13.09□□□□□ -0.31
SMARCD1-202ENST00000394963 WNT2P09544 360 aa13.09□□□□□ -0.31
SMARCD1-202ENST00000394963 LMO1P25800 156 aa13.09□□□□□ -0.31
SMARCD1-202ENST00000394963 THBS3P49746 956 aa13.09□□□□□ -0.31
SMARCD1-202ENST00000394963 LCN2P80188 198 aa13.09□□□□□ -0.31
SMARCD1-202ENST00000394963 MMDQ15546 238 aa13.09□□□□□ -0.31
SMARCD1-202ENST00000394963 C19orf35Q6ZS72 473 aa13.09□□□□□ -0.31
SMARCD1-202ENST00000394963 C1orf174Q8IYL3 243 aa13.09□□□□□ -0.31
SMARCD1-202ENST00000394963 ZNF383Q8NA42 475 aa13.09□□□□□ -0.31
SMARCD1-202ENST00000394963 RAB1CQ92928 201 aa13.09□□□□□ -0.31
SMARCD1-202ENST00000394963 IL22RA2Q969J5 263 aa13.09□□□□□ -0.31
SMARCD1-202ENST00000394963 IGHV3OR16-8A0A075B7F1 116 aa13.08□□□□□ -0.32
SMARCD1-202ENST00000394963 TMEM178BH3BS89 294 aa13.08□□□□□ -0.32
SMARCD1-202ENST00000394963 MGST1P10620 155 aaKnown RBP13.08□□□□□ -0.32
SMARCD1-202ENST00000394963 TDGF1P3P51864 188 aa13.08□□□□□ -0.32
SMARCD1-202ENST00000394963 IFI27L2Q9H2X8 130 aa13.08□□□□□ -0.32
SMARCD1-202ENST00000394963 MTORP42345 2549 aa13.08□□□□□ -0.32
SMARCD1-202ENST00000394963 UNQ6494/PRO21346Q6UXR6 183 aa13.08□□□□□ -0.32
SMARCD1-202ENST00000394963 BLNKQ8WV28 456 aa13.08□□□□□ -0.32
SMARCD1-202ENST00000394963 RAB13P51153 203 aa13.08□□□□□ -0.32
SMARCD1-202ENST00000394963 KLRD1Q13241 179 aa13.08□□□□□ -0.32
SMARCD1-202ENST00000394963 OR8B3Q8NGG8 313 aa13.08□□□□□ -0.32
SMARCD1-202ENST00000394963 OR51G1Q8NGK1 321 aa13.08□□□□□ -0.32
SMARCD1-202ENST00000394963 POM121Q96HA1 1249 aa13.08□□□□□ -0.32
SMARCD1-202ENST00000394963 OR5B12Q96R08 314 aa13.08□□□□□ -0.32
SMARCD1-202ENST00000394963 OR8B2Q96RD0 313 aa13.08□□□□□ -0.32
SMARCD1-202ENST00000394963 BIN3Q9NQY0 253 aa13.08□□□□□ -0.32
SMARCD1-202ENST00000394963 ZNF672Q499Z4 452 aaPredicted RBP13.07□□□□□ -0.32
SMARCD1-202ENST00000394963 ZNF788Q6ZQV5 615 aa13.07□□□□□ -0.32
SMARCD1-202ENST00000394963 SLC35E1Q96K37 410 aa13.07□□□□□ -0.32
SMARCD1-202ENST00000394963 TRBV6-6A0A0A6YYG2 114 aa13.07□□□□□ -0.32
SMARCD1-202ENST00000394963 ZNF729A6NN14 1252 aaPredicted RBP13.07□□□□□ -0.32
SMARCD1-202ENST00000394963 B9A039 149 aa13.07□□□□□ -0.32
SMARCD1-202ENST00000394963 C15orf65H3BRN8 121 aa13.07□□□□□ -0.32
SMARCD1-202ENST00000394963 YPEL1O60688 119 aa13.07□□□□□ -0.32
SMARCD1-202ENST00000394963 SAA1P0DJI8 122 aaPredicted RBP13.07□□□□□ -0.32
SMARCD1-202ENST00000394963 IL3RAP26951 378 aa13.07□□□□□ -0.32
SMARCD1-202ENST00000394963 NDUFA6P56556 154 aa13.07□□□□□ -0.32
SMARCD1-202ENST00000394963 Q6ZS49 121 aa13.07□□□□□ -0.32
SMARCD1-202ENST00000394963 YPEL2Q96QA6 119 aa13.07□□□□□ -0.32
SMARCD1-202ENST00000394963 HES4Q9HCC6 221 aa13.07□□□□□ -0.32
SMARCD1-202ENST00000394963 TIMM8BQ9Y5J9 83 aaPredicted RBP13.07□□□□□ -0.32
SMARCD1-202ENST00000394963 IGLV3-9A0A075B6K5 115 aa13.07□□□□□ -0.32
SMARCD1-202ENST00000394963 CDK2AP1O14519 115 aa13.07□□□□□ -0.32
SMARCD1-202ENST00000394963 RBP4P02753 201 aa13.07□□□□□ -0.32
SMARCD1-202ENST00000394963 RD3LP0DJH9 198 aa13.07□□□□□ -0.32
SMARCD1-202ENST00000394963 SPCS3P61009 180 aa13.07□□□□□ -0.32
SMARCD1-202ENST00000394963 C22orf15Q8WYQ4 148 aa13.07□□□□□ -0.32
SMARCD1-202ENST00000394963 PXMP4Q9Y6I8 212 aa13.07□□□□□ -0.32
SMARCD1-202ENST00000394963 OR10J1P30954 320 aa13.06□□□□□ -0.32
SMARCD1-202ENST00000394963 SNRPEP62304 92 aaKnown RBP13.06□□□□□ -0.32
SMARCD1-202ENST00000394963 C17orf58Q2M2W7 97 aa13.06□□□□□ -0.32
SMARCD1-202ENST00000394963 WDR25Q64LD2 544 aaPredicted RBP13.06□□□□□ -0.32
SMARCD1-202ENST00000394963 PRR27Q6MZM9 219 aa13.06□□□□□ -0.32
SMARCD1-202ENST00000394963 FBXL15Q9H469 300 aa13.06□□□□□ -0.32
SMARCD1-202ENST00000394963 PGPEP1LA6NFU8 196 aa13.06□□□□□ -0.32
SMARCD1-202ENST00000394963 PRB1P04280 392 aa13.06□□□□□ -0.32
SMARCD1-202ENST00000394963 HTD2P86397 168 aa13.06□□□□□ -0.32
SMARCD1-202ENST00000394963 AGMATQ9BSE5 352 aa13.06□□□□□ -0.32
SMARCD1-202ENST00000394963 GPR6P46095 362 aaPredicted RBP13.06□□□□□ -0.32
SMARCD1-202ENST00000394963 HSPE1P61604 102 aaKnown RBP13.06□□□□□ -0.32
SMARCD1-202ENST00000394963 VMA21Q3ZAQ7 101 aa13.06□□□□□ -0.32
SMARCD1-202ENST00000394963 IGF2-ASQ6U949 168 aa13.06□□□□□ -0.32
SMARCD1-202ENST00000394963 HAPLN4Q86UW8 402 aa13.06□□□□□ -0.32
SMARCD1-202ENST00000394963 DNASE2O00115 360 aaPredicted RBP13.05□□□□□ -0.32
SMARCD1-202ENST00000394963 IGFBP2P18065 325 aa13.05□□□□□ -0.32
SMARCD1-202ENST00000394963 CA7P43166 264 aa13.05□□□□□ -0.32
SMARCD1-202ENST00000394963 RPL8P62917 257 aaKnown RBP13.05□□□□□ -0.32
SMARCD1-202ENST00000394963 C11orf94C9JXX5 98 aa13.05□□□□□ -0.32
SMARCD1-202ENST00000394963 PROP1O75360 226 aa13.05□□□□□ -0.32
SMARCD1-202ENST00000394963 PSG5Q15238 335 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms