RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 PATZ1Q9HBE1 687 aaKnown RBP12.55□□□□□ -0.4
CPSF7-202ENST00000394888 MANBALQ9NQG1 85 aa12.55□□□□□ -0.4
CPSF7-202ENST00000394888 TP53TG5Q9Y2B4 290 aa12.55□□□□□ -0.4
CPSF7-202ENST00000394888 KIAA0141Q14154 515 aaPredicted RBP12.54□□□□□ -0.4
CPSF7-202ENST00000394888 C11orf42Q8N5U0 333 aa12.54□□□□□ -0.4
CPSF7-202ENST00000394888 OR13D1Q8NGV5 346 aa12.54□□□□□ -0.4
CPSF7-202ENST00000394888 ZNF503Q96F45 646 aa12.54□□□□□ -0.4
CPSF7-202ENST00000394888 MUC6Q6W4X9 2439 aa12.54□□□□□ -0.4
CPSF7-202ENST00000394888 CLDN34H7C241 214 aa12.54□□□□□ -0.4
CPSF7-202ENST00000394888 DIAPH2-AS1Q14236 149 aa12.54□□□□□ -0.4
CPSF7-202ENST00000394888 KRTCAP3Q53RY4 240 aa12.54□□□□□ -0.4
CPSF7-202ENST00000394888 FAM210BQ96KR6 192 aa12.54□□□□□ -0.4
CPSF7-202ENST00000394888 YTHDF2Q9Y5A9 579 aaKnown RBP12.54□□□□□ -0.4
CPSF7-202ENST00000394888 MBP02144 154 aa12.53□□□□□ -0.4
CPSF7-202ENST00000394888 STAG3L2P0CL84 134 aa12.53□□□□□ -0.4
CPSF7-202ENST00000394888 STAG3L3P0CL85 134 aa12.53□□□□□ -0.4
CPSF7-202ENST00000394888 MIC13Q5XKP0 118 aa12.53□□□□□ -0.4
CPSF7-202ENST00000394888 ZNF596Q8TC21 504 aa12.53□□□□□ -0.4
CPSF7-202ENST00000394888 SMIM7Q9BQ49 75 aa12.53□□□□□ -0.4
CPSF7-202ENST00000394888 SEPSECSQ9HD40 501 aaKnown RBP12.53□□□□□ -0.4
CPSF7-202ENST00000394888 CTSZQ9UBR2 303 aa12.53□□□□□ -0.4
CPSF7-202ENST00000394888 IFNA17P01571 189 aa12.53□□□□□ -0.4
CPSF7-202ENST00000394888 CDC34P49427 236 aaPredicted RBP12.53□□□□□ -0.4
CPSF7-202ENST00000394888 RHOVQ96L33 236 aa12.53□□□□□ -0.4
CPSF7-202ENST00000394888 S1PR3Q99500 378 aa12.53□□□□□ -0.4
CPSF7-202ENST00000394888 ACTR3CQ9C0K3 210 aaPredicted RBP12.53□□□□□ -0.4
CPSF7-202ENST00000394888 TMPRSS2O15393 492 aa12.53□□□□□ -0.4
CPSF7-202ENST00000394888 FOXH1O75593 365 aa12.53□□□□□ -0.4
CPSF7-202ENST00000394888 BSPH1Q075Z2 132 aa12.53□□□□□ -0.4
CPSF7-202ENST00000394888 LINC01551Q86U37 167 aa12.53□□□□□ -0.4
CPSF7-202ENST00000394888 RPUSD4Q96CM3 377 aaKnown RBP12.53□□□□□ -0.4
CPSF7-202ENST00000394888 LYPD2Q6UXB3 125 aa12.52□□□□□ -0.4
CPSF7-202ENST00000394888 ITPR1Q14643 2758 aa12.52□□□□□ -0.41
CPSF7-202ENST00000394888 PSMB11A5LHX3 300 aa12.52□□□□□ -0.41
CPSF7-202ENST00000394888 ZNF729A6NN14 1252 aaPredicted RBP12.52□□□□□ -0.41
CPSF7-202ENST00000394888 CA2P00918 260 aa12.52□□□□□ -0.41
CPSF7-202ENST00000394888 CRYABP02511 175 aaKnown RBP12.52□□□□□ -0.41
CPSF7-202ENST00000394888 KIR2DS2P43631 304 aa12.52□□□□□ -0.41
CPSF7-202ENST00000394888 CCL8P80075 99 aa12.52□□□□□ -0.41
CPSF7-202ENST00000394888 TMEM241Q24JQ0 296 aa12.52□□□□□ -0.41
CPSF7-202ENST00000394888 RUSC1-AS1Q66K80 236 aa12.52□□□□□ -0.41
CPSF7-202ENST00000394888 TMEM144Q7Z5S9 345 aa12.52□□□□□ -0.41
CPSF7-202ENST00000394888 DEFB108BQ8NET1 73 aa12.52□□□□□ -0.41
CPSF7-202ENST00000394888 OR4X1Q8NH49 305 aa12.52□□□□□ -0.41
CPSF7-202ENST00000394888 OR4S2Q8NH73 311 aa12.52□□□□□ -0.41
CPSF7-202ENST00000394888 CTDSP1Q9GZU7 261 aa12.52□□□□□ -0.41
CPSF7-202ENST00000394888 PGPEP1LA6NFU8 196 aa12.52□□□□□ -0.41
CPSF7-202ENST00000394888 SHISA9B4DS77 424 aa12.52□□□□□ -0.41
CPSF7-202ENST00000394888 ARL14EPLP0DKL9 152 aa12.52□□□□□ -0.41
CPSF7-202ENST00000394888 GNG10P50151 68 aa12.52□□□□□ -0.41
CPSF7-202ENST00000394888 PXMP4Q9Y6I8 212 aa12.52□□□□□ -0.41
CPSF7-202ENST00000394888 NAV3Q8IVL0 2385 aa12.52□□□□□ -0.41
CPSF7-202ENST00000394888 RAB7AP51149 207 aa12.51□□□□□ -0.41
CPSF7-202ENST00000394888 ZNF674Q2M3X9 581 aa12.51□□□□□ -0.41
CPSF7-202ENST00000394888 OR4A16Q8NH70 328 aa12.51□□□□□ -0.41
CPSF7-202ENST00000394888 ST6GALNAC6Q969X2 333 aa12.51□□□□□ -0.41
CPSF7-202ENST00000394888 C17orf100A8MU93 164 aa12.51□□□□□ -0.41
CPSF7-202ENST00000394888 S100A12P80511 92 aa12.51□□□□□ -0.41
CPSF7-202ENST00000394888 OR4F5Q8NH21 305 aa12.51□□□□□ -0.41
CPSF7-202ENST00000394888 OR4F4Q96R69 305 aa12.51□□□□□ -0.41
CPSF7-202ENST00000394888 IGLV2-23P01705 113 aa12.51□□□□□ -0.41
CPSF7-202ENST00000394888 THBS3P49746 956 aa12.51□□□□□ -0.41
CPSF7-202ENST00000394888 EFNB3Q15768 340 aa12.51□□□□□ -0.41
CPSF7-202ENST00000394888 TMEM200BQ69YZ2 307 aa12.51□□□□□ -0.41
CPSF7-202ENST00000394888 C11orf94C9JXX5 98 aa12.5□□□□□ -0.41
CPSF7-202ENST00000394888 MPDU1O75352 247 aa12.5□□□□□ -0.41
CPSF7-202ENST00000394888 CCL3L1P16619 93 aa12.5□□□□□ -0.41
CPSF7-202ENST00000394888 PSMB3P49720 205 aa12.5□□□□□ -0.41
CPSF7-202ENST00000394888 MRPS11P82912 194 aaKnown RBP12.5□□□□□ -0.41
CPSF7-202ENST00000394888 LYG1Q8N1E2 194 aa12.5□□□□□ -0.41
CPSF7-202ENST00000394888 LINC00312Q9Y6C7 94 aa12.5□□□□□ -0.41
CPSF7-202ENST00000394888 TEX50A0A1B0GTY4 177 aa12.5□□□□□ -0.41
CPSF7-202ENST00000394888 UPK2O00526 184 aa12.5□□□□□ -0.41
CPSF7-202ENST00000394888 GGCTO75223 188 aaKnown RBP12.5□□□□□ -0.41
CPSF7-202ENST00000394888 OPN1MWP04001 364 aa12.5□□□□□ -0.41
CPSF7-202ENST00000394888 OR4A8P0C604 315 aa12.5□□□□□ -0.41
CPSF7-202ENST00000394888 OPN1MW2P0DN77 364 aa12.5□□□□□ -0.41
CPSF7-202ENST00000394888 OPN1MW3P0DN78 364 aa12.5□□□□□ -0.41
CPSF7-202ENST00000394888 HSPE1P61604 102 aaKnown RBP12.5□□□□□ -0.41
CPSF7-202ENST00000394888 MLANAQ16655 118 aa12.5□□□□□ -0.41
CPSF7-202ENST00000394888 K7EN84 100 aa12.5□□□□□ -0.41
CPSF7-202ENST00000394888 S100A6P06703 90 aa12.5□□□□□ -0.41
CPSF7-202ENST00000394888 NDUFA6P56556 154 aa12.5□□□□□ -0.41
CPSF7-202ENST00000394888 ADIRFQ15847 76 aa12.5□□□□□ -0.41
CPSF7-202ENST00000394888 CEP295Q9C0D2 2601 aa12.49□□□□□ -0.41
CPSF7-202ENST00000394888 TRGV10A0A0A0MS01 117 aa12.49□□□□□ -0.41
CPSF7-202ENST00000394888 SMCO3A2RU48 225 aa12.49□□□□□ -0.41
CPSF7-202ENST00000394888 TMEM178BH3BS89 294 aa12.49□□□□□ -0.41
CPSF7-202ENST00000394888 FSTL3O95633 263 aa12.49□□□□□ -0.41
CPSF7-202ENST00000394888 PRCDQ00LT1 54 aa12.49□□□□□ -0.41
CPSF7-202ENST00000394888 ACOT6Q3I5F7 207 aaPredicted RBP12.49□□□□□ -0.41
CPSF7-202ENST00000394888 FAM180AQ6UWF9 173 aa12.49□□□□□ -0.41
CPSF7-202ENST00000394888 C1orf87Q8N0U7 546 aa12.49□□□□□ -0.41
CPSF7-202ENST00000394888 PPP1R35Q8TAP8 253 aa12.49□□□□□ -0.41
CPSF7-202ENST00000394888 RITA1Q96K30 269 aa12.49□□□□□ -0.41
CPSF7-202ENST00000394888 GPR61Q9BZJ8 451 aa12.49□□□□□ -0.41
CPSF7-202ENST00000394888 IFNA1P01562 189 aa12.49□□□□□ -0.41
CPSF7-202ENST00000394888 IGFBP2P18065 325 aa12.49□□□□□ -0.41
CPSF7-202ENST00000394888 ASCL5Q7RTU5 278 aa12.49□□□□□ -0.41
CPSF7-202ENST00000394888 SLC24A4Q8NFF2 622 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms