RNA–Protein interactions for RNA: ENST00000394768.6

SYNE2-205, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 11,095 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-205ENST00000394768 NRN1Q9NPD7 142 aa6.38□□□□□ -1.39
SYNE2-205ENST00000394768 TMEM106BQ9NUM4 274 aa6.38□□□□□ -1.39
SYNE2-205ENST00000394768 SLC25A15Q9Y619 301 aa6.38□□□□□ -1.39
SYNE2-205ENST00000394768 TGIF2-C20orf24A0A0A6YYL0 155 aa6.38□□□□□ -1.39
SYNE2-205ENST00000394768 EFNB2P52799 333 aa6.38□□□□□ -1.39
SYNE2-205ENST00000394768 ARF6P62330 175 aa6.38□□□□□ -1.39
SYNE2-205ENST00000394768 CACNG8Q8WXS5 425 aa6.38□□□□□ -1.39
SYNE2-205ENST00000394768 EAF1Q96JC9 268 aaPredicted RBP6.38□□□□□ -1.39
SYNE2-205ENST00000394768 MEGF10Q96KG7 1140 aa6.38□□□□□ -1.39
SYNE2-205ENST00000394768 SMOC1Q9H4F8 434 aa6.38□□□□□ -1.39
SYNE2-205ENST00000394768 LOC390937A0A1W2PQ73 354 aa6.38□□□□□ -1.39
SYNE2-205ENST00000394768 MRPL18Q9H0U6 180 aaKnown RBP6.38□□□□□ -1.39
SYNE2-205ENST00000394768 UCN2Q96RP3 112 aa6.38□□□□□ -1.39
SYNE2-205ENST00000394768 YBX2Q9Y2T7 364 aaKnown RBP6.38□□□□□ -1.39
SYNE2-205ENST00000394768 XIRP1Q702N8 1843 aaKnown RBP6.37□□□□□ -1.39
SYNE2-205ENST00000394768 AGAP20933 346 aa6.37□□□□□ -1.39
SYNE2-205ENST00000394768 CEACAM8P31997 349 aaPredicted RBP6.37□□□□□ -1.39
SYNE2-205ENST00000394768 TFF2Q03403 129 aa6.37□□□□□ -1.39
SYNE2-205ENST00000394768 OR9G4Q8NGQ1 327 aa6.37□□□□□ -1.39
SYNE2-205ENST00000394768 KLF14Q8TD94 323 aaPredicted RBP6.37□□□□□ -1.39
SYNE2-205ENST00000394768 SMIM8Q96KF7 97 aa6.37□□□□□ -1.39
SYNE2-205ENST00000394768 MEX3AA1L020 520 aaKnown RBP6.37□□□□□ -1.39
SYNE2-205ENST00000394768 FOXI3A8MTJ6 420 aaPredicted RBP6.37□□□□□ -1.39
SYNE2-205ENST00000394768 ZNF324BQ6AW86 544 aaPredicted RBP6.37□□□□□ -1.39
SYNE2-205ENST00000394768 A0A1B0GUT8 65 aa6.37□□□□□ -1.39
SYNE2-205ENST00000394768 VSIG8P0DPA2 414 aa6.37□□□□□ -1.39
SYNE2-205ENST00000394768 LCN2P80188 198 aa6.37□□□□□ -1.39
SYNE2-205ENST00000394768 TTC9CQ8N5M4 171 aa6.37□□□□□ -1.39
SYNE2-205ENST00000394768 SCGB3A1Q96QR1 104 aa6.37□□□□□ -1.39
SYNE2-205ENST00000394768 CDC42EP2O14613 210 aa6.37□□□□□ -1.39
SYNE2-205ENST00000394768 SPINT1O43278 529 aa6.37□□□□□ -1.39
SYNE2-205ENST00000394768 ZPLD1Q8TCW7 415 aa6.37□□□□□ -1.39
SYNE2-205ENST00000394768 ZNF501Q96CX3 271 aaPredicted RBP6.37□□□□□ -1.39
SYNE2-205ENST00000394768 HSPB9Q9BQS6 159 aa6.37□□□□□ -1.39
SYNE2-205ENST00000394768 PSG4Q00888 419 aa6.37□□□□□ -1.39
SYNE2-205ENST00000394768 RNF114Q9Y508 228 aa6.37□□□□□ -1.39
SYNE2-205ENST00000394768 MPZL1O95297 269 aa6.37□□□□□ -1.39
SYNE2-205ENST00000394768 OR10J3Q5JRS4 329 aa6.37□□□□□ -1.39
SYNE2-205ENST00000394768 PNKDQ8N490 385 aa6.37□□□□□ -1.39
SYNE2-205ENST00000394768 OR5A1Q8NGJ0 315 aa6.37□□□□□ -1.39
SYNE2-205ENST00000394768 SDHCQ99643 169 aaPredicted RBP6.37□□□□□ -1.39
SYNE2-205ENST00000394768 ORMDL2Q53FV1 153 aa6.37□□□□□ -1.39
SYNE2-205ENST00000394768 ORMDL3Q8N138 153 aa6.37□□□□□ -1.39
SYNE2-205ENST00000394768 LINC00305Q7Z4B0 112 aa6.37□□□□□ -1.39
SYNE2-205ENST00000394768 HDHD3Q9BSH5 251 aaPredicted RBP6.37□□□□□ -1.39
SYNE2-205ENST00000394768 BEX4Q9NWD9 120 aaPredicted RBP6.37□□□□□ -1.39
SYNE2-205ENST00000394768 LTBP4Q8N2S1 1624 aa6.37□□□□□ -1.39
SYNE2-205ENST00000394768 C9JCJ5 164 aa6.37□□□□□ -1.39
SYNE2-205ENST00000394768 FXYD1O00168 92 aa6.37□□□□□ -1.39
SYNE2-205ENST00000394768 RRHO14718 337 aa6.37□□□□□ -1.39
SYNE2-205ENST00000394768 CD8AP01732 235 aa6.37□□□□□ -1.39
SYNE2-205ENST00000394768 PPBPP02775 128 aa6.37□□□□□ -1.39
SYNE2-205ENST00000394768 CT62P0C5K7 136 aa6.37□□□□□ -1.39
SYNE2-205ENST00000394768 RPL32P62910 135 aaKnown RBP6.37□□□□□ -1.39
SYNE2-205ENST00000394768 FAM60AQ9NP50 221 aa6.37□□□□□ -1.39
SYNE2-205ENST00000394768 C21orf62Q9NYP8 219 aa6.37□□□□□ -1.39
SYNE2-205ENST00000394768 TOMM7Q9P0U1 55 aa6.37□□□□□ -1.39
SYNE2-205ENST00000394768 CSRP2Q16527 193 aa6.36□□□□□ -1.39
SYNE2-205ENST00000394768 GOLT1AQ6ZVE7 132 aa6.36□□□□□ -1.39
SYNE2-205ENST00000394768 RGP1Q92546 391 aaPredicted RBP6.36□□□□□ -1.39
SYNE2-205ENST00000394768 MGST2Q99735 147 aa6.36□□□□□ -1.39
SYNE2-205ENST00000394768 CXCL16Q9H2A7 254 aa6.36□□□□□ -1.39
SYNE2-205ENST00000394768 TMEM30AQ9NV96 361 aa6.36□□□□□ -1.39
SYNE2-205ENST00000394768 TSPAN2O60636 221 aa6.36□□□□□ -1.39
SYNE2-205ENST00000394768 TRGC2P03986 189 aa6.36□□□□□ -1.39
SYNE2-205ENST00000394768 ZNF506Q5JVG8 444 aa6.36□□□□□ -1.39
SYNE2-205ENST00000394768 PARLQ9H300 379 aa6.36□□□□□ -1.39
SYNE2-205ENST00000394768 ZNF385DQ9H6B1 395 aa6.36□□□□□ -1.39
SYNE2-205ENST00000394768 C7orf69Q9H7B7 122 aa6.36□□□□□ -1.39
SYNE2-205ENST00000394768 GPR132Q9UNW8 380 aa6.36□□□□□ -1.39
SYNE2-205ENST00000394768 PPP1R27Q86WC6 154 aa6.36□□□□□ -1.39
SYNE2-205ENST00000394768 FGFRL1Q8N441 504 aa6.36□□□□□ -1.39
SYNE2-205ENST00000394768 TLNRD1Q9H1K6 362 aa6.36□□□□□ -1.39
SYNE2-205ENST00000394768 APOMO95445 188 aa6.36□□□□□ -1.39
SYNE2-205ENST00000394768 OR5P3Q8WZ94 311 aa6.36□□□□□ -1.39
SYNE2-205ENST00000394768 DOCK8Q8NF50 2099 aa6.36□□□□□ -1.39
SYNE2-205ENST00000394768 NCOR1O75376 2440 aa6.36□□□□□ -1.39
SYNE2-205ENST00000394768 TRGV4A0A0C4DH28 118 aa6.36□□□□□ -1.39
SYNE2-205ENST00000394768 COL9A1P20849 921 aa6.36□□□□□ -1.39
SYNE2-205ENST00000394768 KIAA1644Q3SXP7 199 aa6.36□□□□□ -1.39
SYNE2-205ENST00000394768 C8orf46Q8TAG6 207 aa6.36□□□□□ -1.39
SYNE2-205ENST00000394768 PILRBQ9UKJ0 227 aa6.36□□□□□ -1.39
SYNE2-205ENST00000394768 TCRBV4S1A1TA0A5B7 111 aa6.36□□□□□ -1.39
SYNE2-205ENST00000394768 FAM181AQ8N9Y4 354 aa6.36□□□□□ -1.39
SYNE2-205ENST00000394768 JPT2Q9H910 190 aa6.36□□□□□ -1.39
SYNE2-205ENST00000394768 PEX7O00628 323 aa6.36□□□□□ -1.39
SYNE2-205ENST00000394768 SELENOHQ8IZQ5 122 aaKnown RBP6.36□□□□□ -1.39
SYNE2-205ENST00000394768 KLK15Q9H2R5 256 aa6.36□□□□□ -1.39
SYNE2-205ENST00000394768 TBL2Q9Y4P3 447 aaKnown RBP6.36□□□□□ -1.39
SYNE2-205ENST00000394768 UBR3Q6ZT12 1888 aa6.36□□□□□ -1.39
SYNE2-205ENST00000394768 M0R381 172 aa6.35□□□□□ -1.39
SYNE2-205ENST00000394768 C20orf204Q6ZNR8 217 aa6.35□□□□□ -1.39
SYNE2-205ENST00000394768 SPANXA1Q9NS26 97 aa6.35□□□□□ -1.39
SYNE2-205ENST00000394768 TMEM160Q9NX00 188 aa6.35□□□□□ -1.39
SYNE2-205ENST00000394768 LRRK1Q38SD2 2015 aa6.35□□□□□ -1.39
SYNE2-205ENST00000394768 TGFAP01135 160 aa6.35□□□□□ -1.39
SYNE2-205ENST00000394768 LGALS1P09382 135 aaKnown RBP6.35□□□□□ -1.39
SYNE2-205ENST00000394768 A0A087WX48 190 aa6.35□□□□□ -1.39
SYNE2-205ENST00000394768 ASPDHA6ND91 283 aa6.35□□□□□ -1.39
SYNE2-205ENST00000394768 VSIG10L2P0DP72 767 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms