RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 LCN12Q6JVE5 192 aa15.72■□□□□ 0.11
HOXC6-202ENST00000394331 PRSS57Q6UWY2 283 aa15.72■□□□□ 0.11
HOXC6-202ENST00000394331 LINC00596Q86U02 117 aa15.72■□□□□ 0.11
HOXC6-202ENST00000394331 B4GALT7Q9UBV7 327 aa15.72■□□□□ 0.11
HOXC6-202ENST00000394331 WDR83OSQ9Y284 106 aa15.72■□□□□ 0.11
HOXC6-202ENST00000394331 CNTRLQ7Z7A1 2325 aa15.72■□□□□ 0.11
HOXC6-202ENST00000394331 CGAP01215 116 aa15.71■□□□□ 0.11
HOXC6-202ENST00000394331 IGHV3-9P01782 118 aa15.71■□□□□ 0.11
HOXC6-202ENST00000394331 P0C879 139 aa15.71■□□□□ 0.11
HOXC6-202ENST00000394331 SCGB1A1P11684 91 aa15.71■□□□□ 0.11
HOXC6-202ENST00000394331 ARF1P84077 181 aaKnown RBP15.71■□□□□ 0.11
HOXC6-202ENST00000394331 RNFT1Q5M7Z0 435 aa15.71■□□□□ 0.11
HOXC6-202ENST00000394331 SPINK14Q6IE38 97 aa15.71■□□□□ 0.11
HOXC6-202ENST00000394331 C16orf54Q6UWD8 224 aa15.71■□□□□ 0.11
HOXC6-202ENST00000394331 C1orf210Q8IVY1 113 aa15.71■□□□□ 0.11
HOXC6-202ENST00000394331 NEUROG1Q92886 237 aa15.71■□□□□ 0.11
HOXC6-202ENST00000394331 NINJ1Q92982 152 aa15.71■□□□□ 0.11
HOXC6-202ENST00000394331 RBPJQ06330 500 aa15.71■□□□□ 0.11
HOXC6-202ENST00000394331 OR5A2Q8NGI9 324 aa15.71■□□□□ 0.11
HOXC6-202ENST00000394331 SH3BGRL2Q9UJC5 107 aa15.71■□□□□ 0.11
HOXC6-202ENST00000394331 MPDU1O75352 247 aa15.71■□□□□ 0.1
HOXC6-202ENST00000394331 RASL11AQ6T310 242 aa15.71■□□□□ 0.1
HOXC6-202ENST00000394331 FAM19A2Q8N3H0 131 aa15.71■□□□□ 0.1
HOXC6-202ENST00000394331 FGFRL1Q8N441 504 aa15.71■□□□□ 0.1
HOXC6-202ENST00000394331 WASHC3Q9Y3C0 194 aa15.71■□□□□ 0.1
HOXC6-202ENST00000394331 SLC25A40Q8TBP6 338 aa15.7■□□□□ 0.1
HOXC6-202ENST00000394331 OSTCQ9NRP0 149 aa15.7■□□□□ 0.1
HOXC6-202ENST00000394331 WDR87Q6ZQQ6 2873 aa15.7■□□□□ 0.1
HOXC6-202ENST00000394331 C2orf70A6NJV1 201 aa15.7■□□□□ 0.1
HOXC6-202ENST00000394331 CRXO43186 299 aaPredicted RBP15.7■□□□□ 0.1
HOXC6-202ENST00000394331 BCL3P20749 454 aa15.7■□□□□ 0.1
HOXC6-202ENST00000394331 KLF5Q13887 457 aaPredicted RBP15.7■□□□□ 0.1
HOXC6-202ENST00000394331 C18orf32Q8TCD1 76 aa15.7■□□□□ 0.1
HOXC6-202ENST00000394331 AREGP15514 252 aa15.69■□□□□ 0.1
HOXC6-202ENST00000394331 ABHD17BQ5VST6 288 aa15.69■□□□□ 0.1
HOXC6-202ENST00000394331 EBLN2Q6P2I7 272 aa15.69■□□□□ 0.1
HOXC6-202ENST00000394331 FER1L6-AS1Q8NA97 138 aa15.69■□□□□ 0.1
HOXC6-202ENST00000394331 ARHGAP21Q5T5U3 1957 aa15.69■□□□□ 0.1
HOXC6-202ENST00000394331 TRAV38-1A0A0B4J264 116 aa15.69■□□□□ 0.1
HOXC6-202ENST00000394331 ARL14EPLP0DKL9 152 aa15.69■□□□□ 0.1
HOXC6-202ENST00000394331 DEFA4P12838 97 aa15.69■□□□□ 0.1
HOXC6-202ENST00000394331 NTF3P20783 257 aa15.69■□□□□ 0.1
HOXC6-202ENST00000394331 RIPPLY3P57055 190 aa15.69■□□□□ 0.1
HOXC6-202ENST00000394331 RPL31P62899 125 aaKnown RBP15.69■□□□□ 0.1
HOXC6-202ENST00000394331 SRYQ05066 204 aa15.69■□□□□ 0.1
HOXC6-202ENST00000394331 WIPF2Q8TF74 440 aaPredicted RBP15.69■□□□□ 0.1
HOXC6-202ENST00000394331 ARL2-SNX15V9GYD0 113 aa15.69■□□□□ 0.1
HOXC6-202ENST00000394331 LRRC30A6NM36 301 aa15.68■□□□□ 0.1
HOXC6-202ENST00000394331 NUDT3O95989 172 aa15.68■□□□□ 0.1
HOXC6-202ENST00000394331 CCNOP22674 350 aa15.68■□□□□ 0.1
HOXC6-202ENST00000394331 OPRK1P41145 380 aa15.68■□□□□ 0.1
HOXC6-202ENST00000394331 RELBQ01201 579 aa15.68■□□□□ 0.1
HOXC6-202ENST00000394331 MRPL49Q13405 166 aaKnown RBP15.68■□□□□ 0.1
HOXC6-202ENST00000394331 MRPL21Q7Z2W9 205 aaKnown RBP15.68■□□□□ 0.1
HOXC6-202ENST00000394331 PRDM6Q9NQX0 595 aa15.68■□□□□ 0.1
HOXC6-202ENST00000394331 KMT2EQ8IZD2 1858 aa15.68■□□□□ 0.1
HOXC6-202ENST00000394331 CDIPTO14735 213 aa15.68■□□□□ 0.1
HOXC6-202ENST00000394331 OR7C2O60412 319 aa15.68■□□□□ 0.1
HOXC6-202ENST00000394331 NEURL1O76050 574 aa15.68■□□□□ 0.1
HOXC6-202ENST00000394331 NPY1RP25929 384 aa15.68■□□□□ 0.1
HOXC6-202ENST00000394331 KIAA1644Q3SXP7 199 aa15.68■□□□□ 0.1
HOXC6-202ENST00000394331 UFSP1Q6NVU6 142 aa15.68■□□□□ 0.1
HOXC6-202ENST00000394331 ABI3Q9P2A4 366 aa15.68■□□□□ 0.1
HOXC6-202ENST00000394331 NCKAP5O14513 1909 aa15.68■□□□□ 0.1
HOXC6-202ENST00000394331 WISP2O76076 250 aa15.67■□□□□ 0.1
HOXC6-202ENST00000394331 APCSP02743 223 aa15.67■□□□□ 0.1
HOXC6-202ENST00000394331 CEACAM21Q3KPI0 293 aa15.67■□□□□ 0.1
HOXC6-202ENST00000394331 Q56UQ5 140 aa15.67■□□□□ 0.1
HOXC6-202ENST00000394331 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.67■□□□□ 0.1
HOXC6-202ENST00000394331 MTCH1Q9NZJ7 389 aa15.67■□□□□ 0.1
HOXC6-202ENST00000394331 SMPXQ9UHP9 88 aa15.67■□□□□ 0.1
HOXC6-202ENST00000394331 MUC21A0A0G2JKD1 596 aa15.67■□□□□ 0.1
HOXC6-202ENST00000394331 MUC21A0A140T8X8 626 aa15.67■□□□□ 0.1
HOXC6-202ENST00000394331 ZNF883P0CG24 379 aa15.67■□□□□ 0.1
HOXC6-202ENST00000394331 PSG3Q16557 428 aa15.67■□□□□ 0.1
HOXC6-202ENST00000394331 MUC21Q5SSG8 566 aa15.67■□□□□ 0.1
HOXC6-202ENST00000394331 SLC25A34Q6PIV7 304 aa15.67■□□□□ 0.1
HOXC6-202ENST00000394331 SPRY4Q9C004 299 aa15.67■□□□□ 0.1
HOXC6-202ENST00000394331 COMMD5Q9GZQ3 224 aa15.67■□□□□ 0.1
HOXC6-202ENST00000394331 A0A096LPE4 126 aa15.67■□□□□ 0.1
HOXC6-202ENST00000394331 A0A1W2PPZ6 126 aa15.67■□□□□ 0.1
HOXC6-202ENST00000394331 C5orf49A4QMS7 147 aa15.67■□□□□ 0.1
HOXC6-202ENST00000394331 CD46P15529 392 aa15.67■□□□□ 0.1
HOXC6-202ENST00000394331 ZXDAP98168 799 aa15.67■□□□□ 0.1
HOXC6-202ENST00000394331 TUSC5Q8IXB3 177 aa15.67■□□□□ 0.1
HOXC6-202ENST00000394331 OR2D2Q9H210 308 aa15.67■□□□□ 0.1
HOXC6-202ENST00000394331 GP6Q9HCN6 339 aa15.67■□□□□ 0.1
HOXC6-202ENST00000394331 SMIM27A0A1W2PRY6 76 aa15.66■□□□□ 0.1
HOXC6-202ENST00000394331 HSBP1O75506 76 aa15.66■□□□□ 0.1
HOXC6-202ENST00000394331 C9orf135Q5VTT2 229 aa15.66■□□□□ 0.1
HOXC6-202ENST00000394331 MRPL54Q6P161 138 aaKnown RBP15.66■□□□□ 0.1
HOXC6-202ENST00000394331 ERASQ7Z444 233 aa15.66■□□□□ 0.1
HOXC6-202ENST00000394331 MKXQ8IYA7 352 aa15.66■□□□□ 0.1
HOXC6-202ENST00000394331 YTHDF2Q9Y5A9 579 aaKnown RBP15.66■□□□□ 0.1
HOXC6-202ENST00000394331 SAP30O75446 220 aa15.66■□□□□ 0.1
HOXC6-202ENST00000394331 CRYBB3P26998 211 aa15.66■□□□□ 0.1
HOXC6-202ENST00000394331 SARAFQ96BY9 339 aa15.66■□□□□ 0.1
HOXC6-202ENST00000394331 PPP1R3CQ9UQK1 317 aa15.66■□□□□ 0.1
HOXC6-202ENST00000394331 M0R2Z0 102 aa15.65■□□□□ 0.1
HOXC6-202ENST00000394331 CEACAM3P40198 252 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms