RNA–Protein interactions for RNA: ENST00000394269.7

TCOF1-203, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 3,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-203ENST00000394269 SAV1Q9H4B6 383 aaPredicted RBP9.12□□□□□ -0.95
TCOF1-203ENST00000394269 SCAF4O95104 1147 aaKnown RBP9.11□□□□□ -0.95
TCOF1-203ENST00000394269 HBE1P02100 147 aa9.11□□□□□ -0.95
TCOF1-203ENST00000394269 PDLIM3Q53GG5 364 aaPredicted RBP9.11□□□□□ -0.95
TCOF1-203ENST00000394269 GATAD1Q8WUU5 269 aa9.11□□□□□ -0.95
TCOF1-203ENST00000394269 HARBI1Q96MB7 349 aa9.11□□□□□ -0.95
TCOF1-203ENST00000394269 SCRT1Q9BWW7 348 aa9.11□□□□□ -0.95
TCOF1-203ENST00000394269 KIAA1456Q9P272 454 aa9.11□□□□□ -0.95
TCOF1-203ENST00000394269 OR51B2Q9Y5P1 312 aa9.11□□□□□ -0.95
TCOF1-203ENST00000394269 J3QR06 171 aa9.11□□□□□ -0.95
TCOF1-203ENST00000394269 PPIHO43447 177 aaKnown RBP9.11□□□□□ -0.95
TCOF1-203ENST00000394269 HRASP01112 189 aa9.11□□□□□ -0.95
TCOF1-203ENST00000394269 UBE2G2P60604 165 aa9.11□□□□□ -0.95
TCOF1-203ENST00000394269 PAX5Q02548 391 aa9.11□□□□□ -0.95
TCOF1-203ENST00000394269 KIAA0141Q14154 515 aaPredicted RBP9.11□□□□□ -0.95
TCOF1-203ENST00000394269 IGFBPL1Q8WX77 278 aa9.11□□□□□ -0.95
TCOF1-203ENST00000394269 NPCDR1Q9BY65 106 aa9.11□□□□□ -0.95
TCOF1-203ENST00000394269 TMEM41BQ5BJD5 291 aa9.11□□□□□ -0.95
TCOF1-203ENST00000394269 C10orf91Q5T1B1 145 aa9.11□□□□□ -0.95
TCOF1-203ENST00000394269 SLC25A48Q6ZT89 311 aaKnown RBP9.11□□□□□ -0.95
TCOF1-203ENST00000394269 ZNF429Q86V71 674 aa9.11□□□□□ -0.95
TCOF1-203ENST00000394269 LINC00518Q8N0U6 118 aa9.11□□□□□ -0.95
TCOF1-203ENST00000394269 FAM24BQ8N5W8 94 aa9.11□□□□□ -0.95
TCOF1-203ENST00000394269 ST6GALNAC3Q8NDV1 305 aa9.11□□□□□ -0.95
TCOF1-203ENST00000394269 OR10W1Q8NGF6 305 aa9.11□□□□□ -0.95
TCOF1-203ENST00000394269 CLDND2Q8NHS1 167 aa9.11□□□□□ -0.95
TCOF1-203ENST00000394269 TAGLN2P37802 199 aaKnown RBP9.1□□□□□ -0.95
TCOF1-203ENST00000394269 ICAM4Q14773 271 aa9.1□□□□□ -0.95
TCOF1-203ENST00000394269 MLANAQ16655 118 aa9.1□□□□□ -0.95
TCOF1-203ENST00000394269 MOB3BQ86TA1 216 aa9.1□□□□□ -0.95
TCOF1-203ENST00000394269 TMEM204Q9BSN7 226 aa9.1□□□□□ -0.95
TCOF1-203ENST00000394269 H3BQ15 152 aa9.1□□□□□ -0.95
TCOF1-203ENST00000394269 AKR1D1P51857 326 aa9.1□□□□□ -0.95
TCOF1-203ENST00000394269 SERF2P84101 59 aa9.1□□□□□ -0.95
TCOF1-203ENST00000394269 HIST2H2BCQ6DN03 193 aa9.1□□□□□ -0.95
TCOF1-203ENST00000394269 HEPN1Q6WQI6 88 aa9.1□□□□□ -0.95
TCOF1-203ENST00000394269 RPUSD4Q96CM3 377 aaKnown RBP9.1□□□□□ -0.95
TCOF1-203ENST00000394269 RAI1Q7Z5J4 1906 aaPredicted RBP9.1□□□□□ -0.95
TCOF1-203ENST00000394269 A0A1W2PPH5 198 aa9.09□□□□□ -0.95
TCOF1-203ENST00000394269 A0A1W2PPV4 95 aa9.09□□□□□ -0.95
TCOF1-203ENST00000394269 CA2P00918 260 aa9.09□□□□□ -0.95
TCOF1-203ENST00000394269 APOA2P02652 100 aa9.09□□□□□ -0.95
TCOF1-203ENST00000394269 COL8A1P27658 744 aa9.09□□□□□ -0.95
TCOF1-203ENST00000394269 RPP30P78346 268 aaKnown RBP9.09□□□□□ -0.95
TCOF1-203ENST00000394269 MIC13Q5XKP0 118 aa9.09□□□□□ -0.95
TCOF1-203ENST00000394269 DDB2Q92466 427 aa9.09□□□□□ -0.95
TCOF1-203ENST00000394269 RAB24Q969Q5 203 aa9.09□□□□□ -0.95
TCOF1-203ENST00000394269 SMCO4Q9NRQ5 59 aa9.09□□□□□ -0.95
TCOF1-203ENST00000394269 CSMD2Q7Z408 3487 aa9.09□□□□□ -0.95
TCOF1-203ENST00000394269 PMS2P5A8MQ11 134 aa9.09□□□□□ -0.95
TCOF1-203ENST00000394269 CRYBA1P05813 215 aa9.09□□□□□ -0.95
TCOF1-203ENST00000394269 LOXP28300 417 aaPredicted RBP9.09□□□□□ -0.95
TCOF1-203ENST00000394269 UQCRFS1P47985 274 aa9.09□□□□□ -0.95
TCOF1-203ENST00000394269 HSPE1P61604 102 aaKnown RBP9.09□□□□□ -0.95
TCOF1-203ENST00000394269 C10orf55Q5SWW7 151 aa9.09□□□□□ -0.95
TCOF1-203ENST00000394269 ZNF439Q8NDP4 499 aa9.09□□□□□ -0.95
TCOF1-203ENST00000394269 COMMD5Q9GZQ3 224 aa9.09□□□□□ -0.95
TCOF1-203ENST00000394269 PLEKHA3Q9HB20 300 aa9.09□□□□□ -0.95
TCOF1-203ENST00000394269 ONECUT1Q9UBC0 465 aa9.09□□□□□ -0.95
TCOF1-203ENST00000394269 SETXQ7Z333 2677 aaKnown RBP9.09□□□□□ -0.95
TCOF1-203ENST00000394269 ACTL6BO94805 426 aa9.09□□□□□ -0.95
TCOF1-203ENST00000394269 SRP19P09132 144 aaKnown RBP9.09□□□□□ -0.95
TCOF1-203ENST00000394269 SAA1P0DJI8 122 aaPredicted RBP9.09□□□□□ -0.95
TCOF1-203ENST00000394269 NPY1RP25929 384 aa9.09□□□□□ -0.95
TCOF1-203ENST00000394269 KIR2DS2P43631 304 aa9.09□□□□□ -0.95
TCOF1-203ENST00000394269 CST9LP1Q5W188 147 aa9.09□□□□□ -0.95
TCOF1-203ENST00000394269 FLYWCH2Q96CP2 140 aaKnown RBP9.09□□□□□ -0.95
TCOF1-203ENST00000394269 NIPSNAP3BQ9BS92 247 aa9.09□□□□□ -0.95
TCOF1-203ENST00000394269 hCG_1809904A0A1W2PP81 198 aa9.08□□□□□ -0.96
TCOF1-203ENST00000394269 A0A1W2PR64 198 aa9.08□□□□□ -0.96
TCOF1-203ENST00000394269 A0A1W2PRV1 198 aa9.08□□□□□ -0.96
TCOF1-203ENST00000394269 BTBD17A6NE02 478 aa9.08□□□□□ -0.96
TCOF1-203ENST00000394269 C15orf61A6NNL5 157 aa9.08□□□□□ -0.96
TCOF1-203ENST00000394269 ATP6V1FQ16864 119 aa9.08□□□□□ -0.96
TCOF1-203ENST00000394269 ZNF672Q499Z4 452 aaPredicted RBP9.08□□□□□ -0.96
TCOF1-203ENST00000394269 DHRS7BQ6IAN0 325 aaPredicted RBP9.08□□□□□ -0.96
TCOF1-203ENST00000394269 SLC24A4Q8NFF2 622 aa9.08□□□□□ -0.96
TCOF1-203ENST00000394269 PSMG3Q9BT73 122 aaPredicted RBP9.08□□□□□ -0.96
TCOF1-203ENST00000394269 HRNRQ86YZ3 2850 aaPredicted RBP9.08□□□□□ -0.96
TCOF1-203ENST00000394269 RBFOX2O43251 390 aaKnown RBP eCLIP9.08□□□□□ -0.96
TCOF1-203ENST00000394269 REG1AP05451 166 aa9.08□□□□□ -0.96
TCOF1-203ENST00000394269 GATA2P23769 480 aaPredicted RBP9.08□□□□□ -0.96
TCOF1-203ENST00000394269 CDKN1AP38936 164 aa9.08□□□□□ -0.96
TCOF1-203ENST00000394269 TGIF2LXQ8IUE1 241 aa9.08□□□□□ -0.96
TCOF1-203ENST00000394269 OR4F5Q8NH21 305 aa9.08□□□□□ -0.96
TCOF1-203ENST00000394269 RAB39BQ96DA2 213 aa9.08□□□□□ -0.96
TCOF1-203ENST00000394269 ADTRPQ96IZ2 230 aa9.08□□□□□ -0.96
TCOF1-203ENST00000394269 OR4F4Q96R69 305 aa9.08□□□□□ -0.96
TCOF1-203ENST00000394269 SIRT7Q9NRC8 400 aa9.08□□□□□ -0.96
TCOF1-203ENST00000394269 C17orf112F2Z3M2 114 aa9.08□□□□□ -0.96
TCOF1-203ENST00000394269 SLC25A17O43808 307 aa9.08□□□□□ -0.96
TCOF1-203ENST00000394269 BCL2P10415 239 aa9.08□□□□□ -0.96
TCOF1-203ENST00000394269 ARF6P62330 175 aa9.08□□□□□ -0.96
TCOF1-203ENST00000394269 DLK1P80370 383 aa9.08□□□□□ -0.96
TCOF1-203ENST00000394269 MEF2CQ06413 473 aaPredicted RBP9.08□□□□□ -0.96
TCOF1-203ENST00000394269 KDF1Q8NAX2 398 aaPredicted RBP9.08□□□□□ -0.96
TCOF1-203ENST00000394269 CORO2AQ92828 525 aa9.08□□□□□ -0.96
TCOF1-203ENST00000394269 RITA1Q96K30 269 aa9.08□□□□□ -0.96
TCOF1-203ENST00000394269 ACTR3CQ9C0K3 210 aaPredicted RBP9.08□□□□□ -0.96
TCOF1-203ENST00000394269 AURKAIP1Q9NWT8 199 aaPredicted RBP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms