RNA–Protein interactions for RNA: ENST00000394224.3

SIPA1-201, Transcript of signal-induced proliferation-associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1, Length 3,628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-201ENST00000394224 FAM90A22PA8MWA6 464 aa13.92□□□□□ -0.18
SIPA1-201ENST00000394224 FAM90A12PA8MX19 464 aa13.92□□□□□ -0.18
SIPA1-201ENST00000394224 FAM90A5PA8MXJ8 464 aa13.92□□□□□ -0.18
SIPA1-201ENST00000394224 FAM90A23PA8MXZ1 464 aa13.92□□□□□ -0.18
SIPA1-201ENST00000394224 C9orf172C9J069 976 aa13.92□□□□□ -0.18
SIPA1-201ENST00000394224 GCGP01275 180 aa13.92□□□□□ -0.18
SIPA1-201ENST00000394224 FAM90A15PP0C7V4 464 aa13.92□□□□□ -0.18
SIPA1-201ENST00000394224 FAM90A13PP0C7W8 464 aa13.92□□□□□ -0.18
SIPA1-201ENST00000394224 FAM90A14PP0C7W9 464 aa13.92□□□□□ -0.18
SIPA1-201ENST00000394224 FAM90A24PP0C7X0 464 aa13.92□□□□□ -0.18
SIPA1-201ENST00000394224 ERVK-16P61578 105 aa13.92□□□□□ -0.18
SIPA1-201ENST00000394224 COX5BP10606 129 aa13.91□□□□□ -0.18
SIPA1-201ENST00000394224 TREML4Q6UXN2 200 aa13.91□□□□□ -0.18
SIPA1-201ENST00000394224 STRADBQ9C0K7 418 aa13.91□□□□□ -0.18
SIPA1-201ENST00000394224 PCED1AQ9H1Q7 454 aa13.91□□□□□ -0.18
SIPA1-201ENST00000394224 ABI3Q9P2A4 366 aa13.91□□□□□ -0.18
SIPA1-201ENST00000394224 SIGLECL1Q8N7X8 197 aa13.91□□□□□ -0.18
SIPA1-201ENST00000394224 ANAPC16Q96DE5 110 aa13.91□□□□□ -0.18
SIPA1-201ENST00000394224 SH3BGRL2Q9UJC5 107 aa13.91□□□□□ -0.18
SIPA1-201ENST00000394224 SPINT2O43291 252 aa13.91□□□□□ -0.18
SIPA1-201ENST00000394224 NOL4LQ96MY1 436 aaPredicted RBP13.91□□□□□ -0.18
SIPA1-201ENST00000394224 ASCL2Q99929 193 aa13.91□□□□□ -0.18
SIPA1-201ENST00000394224 C2orf88Q9BSF0 95 aa13.91□□□□□ -0.18
SIPA1-201ENST00000394224 SSBP4Q9BWG4 385 aaPredicted RBP13.91□□□□□ -0.18
SIPA1-201ENST00000394224 ANKRD11Q6UB99 2663 aaPredicted RBP13.91□□□□□ -0.18
SIPA1-201ENST00000394224 TRGV5A0A0B4J1U4 118 aa13.9□□□□□ -0.18
SIPA1-201ENST00000394224 DNPH1O43598 174 aa13.9□□□□□ -0.18
SIPA1-201ENST00000394224 ZNF253O75346 499 aa13.9□□□□□ -0.18
SIPA1-201ENST00000394224 SOX8P57073 446 aa13.9□□□□□ -0.18
SIPA1-201ENST00000394224 PMCHL1Q16048 86 aa13.9□□□□□ -0.18
SIPA1-201ENST00000394224 SP5Q6BEB4 398 aaPredicted RBP13.9□□□□□ -0.18
SIPA1-201ENST00000394224 CISD2Q8N5K1 135 aaKnown RBP13.9□□□□□ -0.18
SIPA1-201ENST00000394224 MGST2Q99735 147 aa13.9□□□□□ -0.18
SIPA1-201ENST00000394224 OPN3Q9H1Y3 402 aaPredicted RBP13.9□□□□□ -0.18
SIPA1-201ENST00000394224 SPRR3Q9UBC9 169 aa13.9□□□□□ -0.18
SIPA1-201ENST00000394224 ZNF83P51522 516 aa13.9□□□□□ -0.18
SIPA1-201ENST00000394224 KRTAP27-1Q3LI81 207 aa13.9□□□□□ -0.18
SIPA1-201ENST00000394224 OR5AU1Q8NGC0 362 aa13.9□□□□□ -0.18
SIPA1-201ENST00000394224 ENY2Q9NPA8 101 aa13.9□□□□□ -0.18
SIPA1-201ENST00000394224 ELOVL5Q9NYP7 299 aa13.9□□□□□ -0.18
SIPA1-201ENST00000394224 TRAV5A0A0B4J249 113 aa13.9□□□□□ -0.18
SIPA1-201ENST00000394224 A0A1W2PRD5 423 aa13.9□□□□□ -0.18
SIPA1-201ENST00000394224 A0A1W2PRF3 423 aa13.9□□□□□ -0.18
SIPA1-201ENST00000394224 A0A1W2PRM7 423 aa13.9□□□□□ -0.18
SIPA1-201ENST00000394224 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.9□□□□□ -0.18
SIPA1-201ENST00000394224 IGHV1-2P23083 117 aa13.9□□□□□ -0.18
SIPA1-201ENST00000394224 HINT1P49773 126 aaPredicted RBP13.9□□□□□ -0.18
SIPA1-201ENST00000394224 DUSP3P51452 185 aaPredicted RBP13.9□□□□□ -0.18
SIPA1-201ENST00000394224 ZNF134P52741 427 aa13.9□□□□□ -0.18
SIPA1-201ENST00000394224 NANOS1Q8WY41 292 aaKnown RBP13.9□□□□□ -0.18
SIPA1-201ENST00000394224 RCHY1Q96PM5 261 aa13.9□□□□□ -0.18
SIPA1-201ENST00000394224 COL6A6A6NMZ7 2263 aa13.9□□□□□ -0.19
SIPA1-201ENST00000394224 K7EN84 100 aa13.89□□□□□ -0.19
SIPA1-201ENST00000394224 M0QZ24 198 aa13.89□□□□□ -0.19
SIPA1-201ENST00000394224 SAXO1Q8IYX7 474 aa13.89□□□□□ -0.19
SIPA1-201ENST00000394224 S1PR3Q99500 378 aa13.89□□□□□ -0.19
SIPA1-201ENST00000394224 TMEM208Q9BTX3 173 aa13.89□□□□□ -0.19
SIPA1-201ENST00000394224 TNFSF15O95150 251 aa13.89□□□□□ -0.19
SIPA1-201ENST00000394224 TMEM164Q5U3C3 297 aa13.89□□□□□ -0.19
SIPA1-201ENST00000394224 STPG3Q8N7X2 389 aa13.89□□□□□ -0.19
SIPA1-201ENST00000394224 ZCCHC14Q8WYQ9 949 aaKnown RBP13.89□□□□□ -0.19
SIPA1-201ENST00000394224 ARSJQ5FYB0 599 aaPredicted RBP13.89□□□□□ -0.19
SIPA1-201ENST00000394224 TMEM140Q9NV12 185 aa13.89□□□□□ -0.19
SIPA1-201ENST00000394224 GOLT1BQ9Y3E0 138 aa13.89□□□□□ -0.19
SIPA1-201ENST00000394224 PROP1O75360 226 aa13.88□□□□□ -0.19
SIPA1-201ENST00000394224 SRIP30626 198 aa13.88□□□□□ -0.19
SIPA1-201ENST00000394224 OR10J1P30954 320 aa13.88□□□□□ -0.19
SIPA1-201ENST00000394224 MMD2Q8IY49 270 aa13.88□□□□□ -0.19
SIPA1-201ENST00000394224 BCL2L2Q92843 193 aaPredicted RBP13.88□□□□□ -0.19
SIPA1-201ENST00000394224 OOEPA6NGQ2 149 aa13.88□□□□□ -0.19
SIPA1-201ENST00000394224 TRA2AQ13595 282 aaKnown RBP eCLIP13.88□□□□□ -0.19
SIPA1-201ENST00000394224 MOGAT3Q86VF5 341 aa13.88□□□□□ -0.19
SIPA1-201ENST00000394224 TGIF2LYQ8IUE0 185 aa13.88□□□□□ -0.19
SIPA1-201ENST00000394224 TECRQ9NZ01 308 aaKnown RBP13.88□□□□□ -0.19
SIPA1-201ENST00000394224 DLX1P56177 255 aa13.88□□□□□ -0.19
SIPA1-201ENST00000394224 OR10W1Q8NGF6 305 aa13.88□□□□□ -0.19
SIPA1-201ENST00000394224 TMEM106BQ9NUM4 274 aa13.88□□□□□ -0.19
SIPA1-201ENST00000394224 PMS2P5A8MQ11 134 aa13.87□□□□□ -0.19
SIPA1-201ENST00000394224 DIRC3C9JPN6 131 aa13.87□□□□□ -0.19
SIPA1-201ENST00000394224 GGCTO75223 188 aaKnown RBP13.87□□□□□ -0.19
SIPA1-201ENST00000394224 LGALS4P56470 323 aa13.87□□□□□ -0.19
SIPA1-201ENST00000394224 TPPP2P59282 170 aa13.87□□□□□ -0.19
SIPA1-201ENST00000394224 CENPWQ5EE01 88 aa13.87□□□□□ -0.19
SIPA1-201ENST00000394224 Q8TCH9 128 aa13.87□□□□□ -0.19
SIPA1-201ENST00000394224 BLNKQ8WV28 456 aa13.87□□□□□ -0.19
SIPA1-201ENST00000394224 RNF24Q9Y225 148 aa13.87□□□□□ -0.19
SIPA1-201ENST00000394224 TBL2Q9Y4P3 447 aaKnown RBP13.87□□□□□ -0.19
SIPA1-201ENST00000394224 COL5A1P20908 1838 aaPredicted RBP13.87□□□□□ -0.19
SIPA1-201ENST00000394224 A0A1W2PNU3 283 aaPredicted RBP13.87□□□□□ -0.19
SIPA1-201ENST00000394224 REG1AP05451 166 aa13.87□□□□□ -0.19
SIPA1-201ENST00000394224 SP1P08047 785 aa13.87□□□□□ -0.19
SIPA1-201ENST00000394224 GNG4P50150 75 aa13.87□□□□□ -0.19
SIPA1-201ENST00000394224 TDGF1P3P51864 188 aa13.87□□□□□ -0.19
SIPA1-201ENST00000394224 RNF151Q2KHN1 245 aa13.87□□□□□ -0.19
SIPA1-201ENST00000394224 TRAT1Q6PIZ9 186 aa13.87□□□□□ -0.19
SIPA1-201ENST00000394224 Q6ZN92 141 aa13.87□□□□□ -0.19
SIPA1-201ENST00000394224 Q6ZS49 121 aa13.87□□□□□ -0.19
SIPA1-201ENST00000394224 C1orf229Q6ZS94 237 aaPredicted RBP13.87□□□□□ -0.19
SIPA1-201ENST00000394224 CD177Q8N6Q3 437 aa13.87□□□□□ -0.19
SIPA1-201ENST00000394224 KIR3DL3Q8N743 410 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms