RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 LEMD1Q68G75 181 aa11.12□□□□□ -0.63
LCA5-202ENST00000392959 WDYHV1Q96HA8 205 aa11.12□□□□□ -0.63
LCA5-202ENST00000392959 LOXL4Q96JB6 756 aa11.12□□□□□ -0.63
LCA5-202ENST00000392959 KCNS1Q96KK3 526 aa11.12□□□□□ -0.63
LCA5-202ENST00000392959 C17orf98A8MV24 154 aa11.12□□□□□ -0.63
LCA5-202ENST00000392959 NPIPB6E9PJ23 425 aa11.12□□□□□ -0.63
LCA5-202ENST00000392959 SLC17A3O00476 420 aa11.12□□□□□ -0.63
LCA5-202ENST00000392959 ARF6P62330 175 aa11.12□□□□□ -0.63
LCA5-202ENST00000392959 CLDND2Q8NHS1 167 aa11.12□□□□□ -0.63
LCA5-202ENST00000392959 REPIN1Q9BWE0 567 aaKnown RBP11.12□□□□□ -0.63
LCA5-202ENST00000392959 GP6Q9HCN6 339 aa11.12□□□□□ -0.63
LCA5-202ENST00000392959 IL36BQ9NZH7 164 aa11.12□□□□□ -0.63
LCA5-202ENST00000392959 H7C2G1 150 aa11.12□□□□□ -0.63
LCA5-202ENST00000392959 MOSP00540 346 aa11.12□□□□□ -0.63
LCA5-202ENST00000392959 RALGAPA1Q6GYQ0 2036 aa11.11□□□□□ -0.63
LCA5-202ENST00000392959 CGAP01215 116 aa11.11□□□□□ -0.63
LCA5-202ENST00000392959 PRSS2P07478 247 aa11.11□□□□□ -0.63
LCA5-202ENST00000392959 NBEAP1P0C6P0 100 aa11.11□□□□□ -0.63
LCA5-202ENST00000392959 TFF3Q07654 80 aa11.11□□□□□ -0.63
LCA5-202ENST00000392959 LINC00305Q7Z4B0 112 aa11.11□□□□□ -0.63
LCA5-202ENST00000392959 CLEC7AQ9BXN2 247 aa11.11□□□□□ -0.63
LCA5-202ENST00000392959 CREBBPQ92793 2442 aa11.11□□□□□ -0.63
LCA5-202ENST00000392959 H0YIZ8 118 aa11.11□□□□□ -0.63
LCA5-202ENST00000392959 GLRXP35754 106 aa11.11□□□□□ -0.63
LCA5-202ENST00000392959 SMAGPQ0VAQ4 97 aa11.11□□□□□ -0.63
LCA5-202ENST00000392959 PEAR1Q5VY43 1037 aaPredicted RBP11.11□□□□□ -0.63
LCA5-202ENST00000392959 ACP7Q6ZNF0 438 aa11.11□□□□□ -0.63
LCA5-202ENST00000392959 ZNF525Q8N782 197 aa11.11□□□□□ -0.63
LCA5-202ENST00000392959 C1QTNF5Q9BXJ0 243 aa11.11□□□□□ -0.63
LCA5-202ENST00000392959 IFI27L2Q9H2X8 130 aa11.11□□□□□ -0.63
LCA5-202ENST00000392959 A0A087WV48 116 aa11.11□□□□□ -0.63
LCA5-202ENST00000392959 PRR32B1ATL7 298 aa11.11□□□□□ -0.63
LCA5-202ENST00000392959 IL4P05112 153 aa11.11□□□□□ -0.63
LCA5-202ENST00000392959 FREM3P0C091 2139 aa11.11□□□□□ -0.63
LCA5-202ENST00000392959 HERPUD1Q15011 391 aa11.11□□□□□ -0.63
LCA5-202ENST00000392959 NRN1LQ496H8 165 aa11.11□□□□□ -0.63
LCA5-202ENST00000392959 RNFT1Q5M7Z0 435 aa11.11□□□□□ -0.63
LCA5-202ENST00000392959 ZNF600Q6ZNG1 722 aa11.11□□□□□ -0.63
LCA5-202ENST00000392959 OSR1Q8TAX0 266 aaPredicted RBP11.11□□□□□ -0.63
LCA5-202ENST00000392959 ZNF837Q96EG3 531 aaPredicted RBP11.11□□□□□ -0.63
LCA5-202ENST00000392959 F11RQ9Y624 299 aaKnown RBP11.11□□□□□ -0.63
LCA5-202ENST00000392959 AUP1Q9Y679 476 aa11.11□□□□□ -0.63
LCA5-202ENST00000392959 NBASA2RRP1 2371 aa11.11□□□□□ -0.63
LCA5-202ENST00000392959 RAB9AP51151 201 aa11.1□□□□□ -0.63
LCA5-202ENST00000392959 SYT8Q8NBV8 401 aa11.1□□□□□ -0.63
LCA5-202ENST00000392959 IMMP2LQ96T52 175 aa11.1□□□□□ -0.63
LCA5-202ENST00000392959 MRPL13Q9BYD1 178 aaKnown RBP11.1□□□□□ -0.63
LCA5-202ENST00000392959 AKIRIN1Q9H9L7 192 aaPredicted RBP11.1□□□□□ -0.63
LCA5-202ENST00000392959 SCN4AP35499 1836 aa11.1□□□□□ -0.63
LCA5-202ENST00000392959 RELQ04864 619 aaPredicted RBP11.1□□□□□ -0.63
LCA5-202ENST00000392959 ATP1A1-AS1Q5TC04 95 aa11.1□□□□□ -0.63
LCA5-202ENST00000392959 FAM53AQ6NSI3 398 aaPredicted RBP11.1□□□□□ -0.63
LCA5-202ENST00000392959 OR4D5Q8NGN0 318 aa11.1□□□□□ -0.63
LCA5-202ENST00000392959 ZNF703Q9H7S9 590 aaPredicted RBP11.1□□□□□ -0.63
LCA5-202ENST00000392959 ANKRD36A6QL64 1941 aa11.1□□□□□ -0.63
LCA5-202ENST00000392959 J3QRE1 110 aa11.1□□□□□ -0.63
LCA5-202ENST00000392959 ATP5G3P48201 142 aa11.1□□□□□ -0.63
LCA5-202ENST00000392959 SAPCD1Q5SSQ6 148 aa11.1□□□□□ -0.63
LCA5-202ENST00000392959 KLK15Q9H2R5 256 aa11.1□□□□□ -0.63
LCA5-202ENST00000392959 TBL2Q9Y4P3 447 aaKnown RBP11.1□□□□□ -0.63
LCA5-202ENST00000392959 PARP14Q460N5 1801 aa11.1□□□□□ -0.63
LCA5-202ENST00000392959 C7orf71A4D174 169 aa11.1□□□□□ -0.63
LCA5-202ENST00000392959 NPIPB7O75200 414 aa11.1□□□□□ -0.63
LCA5-202ENST00000392959 IGFBP2P18065 325 aa11.1□□□□□ -0.63
LCA5-202ENST00000392959 UCNP55089 124 aa11.1□□□□□ -0.63
LCA5-202ENST00000392959 WNT10AQ9GZT5 417 aa11.1□□□□□ -0.63
LCA5-202ENST00000392959 SCO2A0A1W2PP80 73 aa11.09□□□□□ -0.63
LCA5-202ENST00000392959 RBFOX2O43251 390 aaKnown RBP eCLIP11.09□□□□□ -0.63
LCA5-202ENST00000392959 LYPD3O95274 346 aa11.09□□□□□ -0.63
LCA5-202ENST00000392959 CELA3AP09093 270 aa11.09□□□□□ -0.63
LCA5-202ENST00000392959 PMCHL2Q9BQD1 86 aa11.09□□□□□ -0.63
LCA5-202ENST00000392959 LRRC37AA6NMS7 1700 aa11.09□□□□□ -0.63
LCA5-202ENST00000392959 NPIPB11E5RHQ5 1161 aa11.09□□□□□ -0.63
LCA5-202ENST00000392959 F8VVB4 439 aa11.09□□□□□ -0.63
LCA5-202ENST00000392959 F8VWA3 439 aa11.09□□□□□ -0.63
LCA5-202ENST00000392959 ICAM4Q14773 271 aa11.09□□□□□ -0.63
LCA5-202ENST00000392959 OR13A1Q8NGR1 328 aa11.09□□□□□ -0.63
LCA5-202ENST00000392959 SLC25A28Q96A46 364 aa11.09□□□□□ -0.63
LCA5-202ENST00000392959 IGHV3-35A0A0C4DH35 117 aa11.09□□□□□ -0.63
LCA5-202ENST00000392959 PCP4P48539 62 aa11.09□□□□□ -0.63
LCA5-202ENST00000392959 RNF115Q9Y4L5 304 aa11.09□□□□□ -0.63
LCA5-202ENST00000392959 IGKV1-9A0A0C4DH69 117 aa11.09□□□□□ -0.63
LCA5-202ENST00000392959 LINC00587B1AMM8 73 aa11.09□□□□□ -0.63
LCA5-202ENST00000392959 FGF16O43320 207 aa11.09□□□□□ -0.63
LCA5-202ENST00000392959 GAS1P54826 345 aa11.09□□□□□ -0.63
LCA5-202ENST00000392959 ADIPOQQ15848 244 aa11.09□□□□□ -0.63
LCA5-202ENST00000392959 CLEC2AQ6UVW9 174 aa11.09□□□□□ -0.63
LCA5-202ENST00000392959 VWCEQ96DN2 955 aa11.09□□□□□ -0.63
LCA5-202ENST00000392959 SIGLEC12Q96PQ1 595 aa11.09□□□□□ -0.63
LCA5-202ENST00000392959 FOXJ2Q9P0K8 574 aa11.09□□□□□ -0.63
LCA5-202ENST00000392959 CECR9P0C854 216 aa11.08□□□□□ -0.64
LCA5-202ENST00000392959 RPL23P62829 140 aaKnown RBP11.08□□□□□ -0.64
LCA5-202ENST00000392959 TBR1Q16650 682 aa11.08□□□□□ -0.64
LCA5-202ENST00000392959 ARL6IP6Q8N6S5 226 aa11.08□□□□□ -0.64
LCA5-202ENST00000392959 C14orf144Q96I85 54 aa11.08□□□□□ -0.64
LCA5-202ENST00000392959 TMEM136Q6ZRR5 245 aa11.08□□□□□ -0.64
LCA5-202ENST00000392959 PNKDQ8N490 385 aa11.08□□□□□ -0.64
LCA5-202ENST00000392959 CADP27708 2225 aa11.08□□□□□ -0.64
LCA5-202ENST00000392959 A1L4Q6 167 aa11.08□□□□□ -0.64
LCA5-202ENST00000392959 SRSF3P84103 164 aaKnown RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms