RNA–Protein interactions for RNA: ENST00000392343.3

CCDC57-203, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC57, Length 2,896 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-203ENST00000392343 ZNF718Q3SXZ3 478 aa11.57□□□□□ -0.56
CCDC57-203ENST00000392343 ALKBH2Q6NS38 261 aa11.57□□□□□ -0.56
CCDC57-203ENST00000392343 ACP7Q6ZNF0 438 aa11.57□□□□□ -0.56
CCDC57-203ENST00000392343 BTF3L4Q96K17 158 aa11.57□□□□□ -0.56
CCDC57-203ENST00000392343 HSD17B10Q99714 261 aaKnown RBP11.57□□□□□ -0.56
CCDC57-203ENST00000392343 PTPRBP23467 1997 aa11.57□□□□□ -0.56
CCDC57-203ENST00000392343 GFRA3O60609 400 aa11.57□□□□□ -0.56
CCDC57-203ENST00000392343 DUSP3P51452 185 aaPredicted RBP11.57□□□□□ -0.56
CCDC57-203ENST00000392343 HTD2P86397 168 aa11.57□□□□□ -0.56
CCDC57-203ENST00000392343 MMDQ15546 238 aa11.57□□□□□ -0.56
CCDC57-203ENST00000392343 RCHY1Q96PM5 261 aa11.57□□□□□ -0.56
CCDC57-203ENST00000392343 FOXJ2Q9P0K8 574 aa11.57□□□□□ -0.56
CCDC57-203ENST00000392343 NAT8BQ9UHF3 227 aa11.57□□□□□ -0.56
CCDC57-203ENST00000392343 GATA2P23769 480 aaPredicted RBP11.56□□□□□ -0.56
CCDC57-203ENST00000392343 LGALS4P56470 323 aa11.56□□□□□ -0.56
CCDC57-203ENST00000392343 MRPL49Q13405 166 aaKnown RBP11.56□□□□□ -0.56
CCDC57-203ENST00000392343 PRR31Q5SQ13 230 aa11.56□□□□□ -0.56
CCDC57-203ENST00000392343 STPG3Q8N7X2 389 aa11.56□□□□□ -0.56
CCDC57-203ENST00000392343 SIGLECL1Q8N7X8 197 aa11.56□□□□□ -0.56
CCDC57-203ENST00000392343 TRAV34A0A0B4J273 112 aa11.56□□□□□ -0.56
CCDC57-203ENST00000392343 CRYBB3P26998 211 aa11.56□□□□□ -0.56
CCDC57-203ENST00000392343 ZNF134P52741 427 aa11.56□□□□□ -0.56
CCDC57-203ENST00000392343 C1orf229Q6ZS94 237 aaPredicted RBP11.56□□□□□ -0.56
CCDC57-203ENST00000392343 MIR17HGQ75NE6 70 aa11.56□□□□□ -0.56
CCDC57-203ENST00000392343 MOB3BQ86TA1 216 aa11.56□□□□□ -0.56
CCDC57-203ENST00000392343 ATOH7Q8N100 152 aa11.56□□□□□ -0.56
CCDC57-203ENST00000392343 EAF1Q96JC9 268 aaPredicted RBP11.56□□□□□ -0.56
CCDC57-203ENST00000392343 UHRF2Q96PU4 802 aa11.56□□□□□ -0.56
CCDC57-203ENST00000392343 C20orf144Q9BQM9 153 aa11.56□□□□□ -0.56
CCDC57-203ENST00000392343 HES4Q9HCC6 221 aa11.56□□□□□ -0.56
CCDC57-203ENST00000392343 M0QZK8 103 aa11.55□□□□□ -0.56
CCDC57-203ENST00000392343 IGHV1-2P23083 117 aa11.55□□□□□ -0.56
CCDC57-203ENST00000392343 VDAC2P45880 294 aaPredicted RBP11.55□□□□□ -0.56
CCDC57-203ENST00000392343 RANP62826 216 aaKnown RBP11.55□□□□□ -0.56
CCDC57-203ENST00000392343 RPEL1Q2QD12 228 aa11.55□□□□□ -0.56
CCDC57-203ENST00000392343 RNFT1Q5M7Z0 435 aa11.55□□□□□ -0.56
CCDC57-203ENST00000392343 WDR82Q6UXN9 313 aa11.55□□□□□ -0.56
CCDC57-203ENST00000392343 PQLC2Q6ZP29 291 aa11.55□□□□□ -0.56
CCDC57-203ENST00000392343 FAM19A2Q8N3H0 131 aa11.55□□□□□ -0.56
CCDC57-203ENST00000392343 CD177Q8N6Q3 437 aa11.55□□□□□ -0.56
CCDC57-203ENST00000392343 FAM216AQ8WUB2 273 aa11.55□□□□□ -0.56
CCDC57-203ENST00000392343 WNT10AQ9GZT5 417 aa11.55□□□□□ -0.56
CCDC57-203ENST00000392343 TBL2Q9Y4P3 447 aaKnown RBP11.55□□□□□ -0.56
CCDC57-203ENST00000392343 DIRC3C9JPN6 131 aa11.55□□□□□ -0.56
CCDC57-203ENST00000392343 IGFBP2P18065 325 aa11.55□□□□□ -0.56
CCDC57-203ENST00000392343 AMTP48728 403 aa11.55□□□□□ -0.56
CCDC57-203ENST00000392343 MRPL54Q6P161 138 aaKnown RBP11.55□□□□□ -0.56
CCDC57-203ENST00000392343 IGHV3OR15-7A0A075B7D8 119 aa11.54□□□□□ -0.56
CCDC57-203ENST00000392343 A8MXE2 369 aa11.54□□□□□ -0.56
CCDC57-203ENST00000392343 IQCF6A8MYZ5 107 aa11.54□□□□□ -0.56
CCDC57-203ENST00000392343 PRSS46E5RG02 174 aa11.54□□□□□ -0.56
CCDC57-203ENST00000392343 SPINT2O43291 252 aa11.54□□□□□ -0.56
CCDC57-203ENST00000392343 CA1P00915 261 aaPredicted RBP11.54□□□□□ -0.56
CCDC57-203ENST00000392343 PSG5Q15238 335 aa11.54□□□□□ -0.56
CCDC57-203ENST00000392343 NHLRC2Q8NBF2 726 aa11.54□□□□□ -0.56
CCDC57-203ENST00000392343 TMEM140Q9NV12 185 aa11.54□□□□□ -0.56
CCDC57-203ENST00000392343 SPRR3Q9UBC9 169 aa11.54□□□□□ -0.56
CCDC57-203ENST00000392343 V9GYV3 84 aa11.54□□□□□ -0.56
CCDC57-203ENST00000392343 C9orf172C9J069 976 aa11.54□□□□□ -0.56
CCDC57-203ENST00000392343 TIMM8AO60220 97 aaPredicted RBP11.54□□□□□ -0.56
CCDC57-203ENST00000392343 WISP2O76076 250 aa11.54□□□□□ -0.56
CCDC57-203ENST00000392343 GPX1P07203 203 aa11.54□□□□□ -0.56
CCDC57-203ENST00000392343 OR10J4P0C629 311 aa11.54□□□□□ -0.56
CCDC57-203ENST00000392343 RELBQ01201 579 aa11.54□□□□□ -0.56
CCDC57-203ENST00000392343 CENPWQ5EE01 88 aa11.54□□□□□ -0.56
CCDC57-203ENST00000392343 ATP1A1-AS1Q5TC04 95 aa11.54□□□□□ -0.56
CCDC57-203ENST00000392343 CDX2Q99626 313 aaPredicted RBP11.54□□□□□ -0.56
CCDC57-203ENST00000392343 NPVFQ9HCQ7 196 aa11.54□□□□□ -0.56
CCDC57-203ENST00000392343 GCM1Q9NP62 436 aa11.54□□□□□ -0.56
CCDC57-203ENST00000392343 TCF19Q9Y242 345 aa11.54□□□□□ -0.56
CCDC57-203ENST00000392343 C15orf65H3BRN8 121 aa11.53□□□□□ -0.56
CCDC57-203ENST00000392343 MPDU1O75352 247 aa11.53□□□□□ -0.56
CCDC57-203ENST00000392343 ERVK-16P61578 105 aa11.53□□□□□ -0.56
CCDC57-203ENST00000392343 Q6ZVH6 145 aa11.53□□□□□ -0.56
CCDC57-203ENST00000392343 NRN1Q9NPD7 142 aa11.53□□□□□ -0.56
CCDC57-203ENST00000392343 SERTAD4Q9NUC0 356 aa11.53□□□□□ -0.56
CCDC57-203ENST00000392343 TCF21O43680 179 aa11.53□□□□□ -0.56
CCDC57-203ENST00000392343 SP1P08047 785 aa11.53□□□□□ -0.56
CCDC57-203ENST00000392343 RPP30P78346 268 aaKnown RBP11.53□□□□□ -0.56
CCDC57-203ENST00000392343 SPATA45Q537H7 98 aa11.53□□□□□ -0.56
CCDC57-203ENST00000392343 HELTA6NFD8 242 aa11.53□□□□□ -0.56
CCDC57-203ENST00000392343 ZNF253O75346 499 aa11.53□□□□□ -0.56
CCDC57-203ENST00000392343 MGST1P10620 155 aaKnown RBP11.53□□□□□ -0.56
CCDC57-203ENST00000392343 NTF3P20783 257 aa11.53□□□□□ -0.56
CCDC57-203ENST00000392343 GNG4P50150 75 aa11.53□□□□□ -0.56
CCDC57-203ENST00000392343 TMEM249Q2WGJ8 235 aa11.53□□□□□ -0.56
CCDC57-203ENST00000392343 MAJINQ3KP22 176 aa11.53□□□□□ -0.56
CCDC57-203ENST00000392343 MORN2Q502X0 79 aa11.53□□□□□ -0.56
CCDC57-203ENST00000392343 TEPPQ6URK8 271 aa11.53□□□□□ -0.56
CCDC57-203ENST00000392343 C11orf42Q8N5U0 333 aa11.53□□□□□ -0.56
CCDC57-203ENST00000392343 CNEP1R1Q8N9A8 125 aa11.53□□□□□ -0.56
CCDC57-203ENST00000392343 ZNRF1Q8ND25 227 aa11.53□□□□□ -0.56
CCDC57-203ENST00000392343 LRRC29Q8WV35 223 aa11.53□□□□□ -0.56
CCDC57-203ENST00000392343 DUSP13Q9UII6 198 aa11.53□□□□□ -0.56
CCDC57-203ENST00000392343 PCNX2A6NKB5 2137 aa11.52□□□□□ -0.56
CCDC57-203ENST00000392343 RHOBP62745 196 aa11.52□□□□□ -0.57
CCDC57-203ENST00000392343 MLANAQ16655 118 aa11.52□□□□□ -0.57
CCDC57-203ENST00000392343 Q8N976 141 aa11.52□□□□□ -0.57
CCDC57-203ENST00000392343 S1PR3Q99500 378 aa11.52□□□□□ -0.57
CCDC57-203ENST00000392343 ABI3Q9P2A4 366 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms