RNA–Protein interactions for RNA: ENST00000390971.1

SNORA40.4-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.4-201ENST00000390971 DERL2Q9GZP9 239 aa0.7□□□□□ -2.3
SNORA40.4-201ENST00000390971 SPANXB1Q9NS25 103 aaPredicted RBP0.7□□□□□ -2.3
SNORA40.4-201ENST00000390971 IRGMA1A4Y4 181 aa0.69□□□□□ -2.3
SNORA40.4-201ENST00000390971 TMEM212A6NML5 194 aa0.69□□□□□ -2.3
SNORA40.4-201ENST00000390971 METTL15P1P0C7V9 234 aa0.69□□□□□ -2.3
SNORA40.4-201ENST00000390971 NFYAP23511 347 aaPredicted RBP0.69□□□□□ -2.3
SNORA40.4-201ENST00000390971 SDHAF4Q5VUM1 108 aa0.69□□□□□ -2.3
SNORA40.4-201ENST00000390971 KRTAP19-3Q7Z4W3 81 aa0.69□□□□□ -2.3
SNORA40.4-201ENST00000390971 EEF1AKMT1Q8WVE0 214 aa0.69□□□□□ -2.3
SNORA40.4-201ENST00000390971 RSL24D1Q9UHA3 163 aaKnown RBP0.69□□□□□ -2.3
SNORA40.4-201ENST00000390971 AK3Q9UIJ7 227 aa0.69□□□□□ -2.3
SNORA40.4-201ENST00000390971 ANAPC10Q9UM13 185 aa0.69□□□□□ -2.3
SNORA40.4-201ENST00000390971 COQ4Q9Y3A0 265 aa0.69□□□□□ -2.3
SNORA40.4-201ENST00000390971 TRAV14DV4A0A0A6YYC5 116 aa0.68□□□□□ -2.3
SNORA40.4-201ENST00000390971 PMP2P02689 132 aa0.68□□□□□ -2.3
SNORA40.4-201ENST00000390971 FXYD2P54710 66 aa0.68□□□□□ -2.3
SNORA40.4-201ENST00000390971 ZNF345Q14585 488 aa0.68□□□□□ -2.3
SNORA40.4-201ENST00000390971 FAM78BQ5VT40 261 aa0.68□□□□□ -2.3
SNORA40.4-201ENST00000390971 SYCE1Q8N0S2 351 aa0.68□□□□□ -2.3
SNORA40.4-201ENST00000390971 ANKRD7Q92527 254 aa0.68□□□□□ -2.3
SNORA40.4-201ENST00000390971 CXorf21Q9HAI6 301 aa0.68□□□□□ -2.3
SNORA40.4-201ENST00000390971 BAIAP2Q9UQB8 552 aa0.68□□□□□ -2.3
SNORA40.4-201ENST00000390971 IGHV1-69-2A0A0G2JMI3 117 aa0.67□□□□□ -2.3
SNORA40.4-201ENST00000390971 TINCRA0A1B0GVN0 87 aa0.67□□□□□ -2.3
SNORA40.4-201ENST00000390971 C21orf140B9A014 251 aa0.67□□□□□ -2.3
SNORA40.4-201ENST00000390971 HPGDSO60760 199 aa0.67□□□□□ -2.3
SNORA40.4-201ENST00000390971 POLR2GP62487 172 aaKnown RBP eCLIP0.67□□□□□ -2.3
SNORA40.4-201ENST00000390971 OR1M1Q8NGA1 313 aa0.67□□□□□ -2.3
SNORA40.4-201ENST00000390971 AQP3Q92482 292 aa0.67□□□□□ -2.3
SNORA40.4-201ENST00000390971 OR8D2Q9GZM6 311 aa0.67□□□□□ -2.3
SNORA40.4-201ENST00000390971 KIF15Q9NS87 1388 aa0.67□□□□□ -2.3
SNORA40.4-201ENST00000390971 A0A087WX48 190 aa0.66□□□□□ -2.3
SNORA40.4-201ENST00000390971 TRPC5OSA6NMA1 111 aa0.66□□□□□ -2.3
SNORA40.4-201ENST00000390971 IQCF5A8MTL0 148 aa0.66□□□□□ -2.3
SNORA40.4-201ENST00000390971 SHBGP04278 402 aa0.66□□□□□ -2.3
SNORA40.4-201ENST00000390971 HLA-DMBP28068 263 aa0.66□□□□□ -2.3
SNORA40.4-201ENST00000390971 S100A7P31151 101 aa0.66□□□□□ -2.3
SNORA40.4-201ENST00000390971 CDC34P49427 236 aaPredicted RBP0.66□□□□□ -2.3
SNORA40.4-201ENST00000390971 RUNX1Q01196 453 aa0.66□□□□□ -2.3
SNORA40.4-201ENST00000390971 ERMAPQ96PL5 475 aaPredicted RBP0.66□□□□□ -2.3
SNORA40.4-201ENST00000390971 ALPK2Q86TB3 2170 aa0.65□□□□□ -2.31
SNORA40.4-201ENST00000390971 I3L521 148 aa0.65□□□□□ -2.31
SNORA40.4-201ENST00000390971 IGHV3-7P01780 117 aa0.65□□□□□ -2.31
SNORA40.4-201ENST00000390971 TNFAIP8L3Q5GJ75 292 aa0.65□□□□□ -2.31
SNORA40.4-201ENST00000390971 SMIM19Q96E16 107 aa0.65□□□□□ -2.31
SNORA40.4-201ENST00000390971 NCOA6Q14686 2063 aaPredicted RBP0.65□□□□□ -2.31
SNORA40.4-201ENST00000390971 TRBV6-7A0A0A0MS04 114 aa0.64□□□□□ -2.31
SNORA40.4-201ENST00000390971 FUOMA2VDF0 154 aa0.64□□□□□ -2.31
SNORA40.4-201ENST00000390971 LST1O00453 97 aa0.64□□□□□ -2.31
SNORA40.4-201ENST00000390971 BIRC5O15392 142 aa0.64□□□□□ -2.31
SNORA40.4-201ENST00000390971 NDUFS6O75380 124 aaKnown RBP0.64□□□□□ -2.31
SNORA40.4-201ENST00000390971 OR4D2P58180 307 aa0.64□□□□□ -2.31
SNORA40.4-201ENST00000390971 TMEM251Q8N6I4 163 aa0.64□□□□□ -2.31
SNORA40.4-201ENST00000390971 DCUN1D5Q9BTE7 237 aa0.64□□□□□ -2.31
SNORA40.4-201ENST00000390971 FKBP14Q9NWM8 211 aa0.64□□□□□ -2.31
SNORA40.4-201ENST00000390971 STRCQ7RTU9 1775 aa0.64□□□□□ -2.31
SNORA40.4-201ENST00000390971 ERICH2A1L162 156 aa0.63□□□□□ -2.31
SNORA40.4-201ENST00000390971 DISC1C4P0D8 188 aa0.63□□□□□ -2.31
SNORA40.4-201ENST00000390971 NOS1APO75052 506 aaPredicted RBP0.63□□□□□ -2.31
SNORA40.4-201ENST00000390971 C1QAP02745 245 aa0.63□□□□□ -2.31
SNORA40.4-201ENST00000390971 TNFAIP6P98066 277 aaPredicted RBP0.63□□□□□ -2.31
SNORA40.4-201ENST00000390971 MGAT3Q09327 533 aa0.63□□□□□ -2.31
SNORA40.4-201ENST00000390971 ZNF846Q147U1 533 aa0.63□□□□□ -2.31
SNORA40.4-201ENST00000390971 TNFAIP8L2Q6P589 184 aaPredicted RBP0.63□□□□□ -2.31
SNORA40.4-201ENST00000390971 OR5B17Q8NGF7 314 aa0.63□□□□□ -2.31
SNORA40.4-201ENST00000390971 NDEL1Q9GZM8 345 aa0.63□□□□□ -2.31
SNORA40.4-201ENST00000390971 WDR54Q9H977 334 aa0.63□□□□□ -2.31
SNORA40.4-201ENST00000390971 FUT9Q9Y231 359 aa0.63□□□□□ -2.31
SNORA40.4-201ENST00000390971 AHNAK2Q8IVF2 5795 aa0.63□□□□□ -2.31
SNORA40.4-201ENST00000390971 OR4C45A6NMZ5 311 aa0.62□□□□□ -2.31
SNORA40.4-201ENST00000390971 HSBP1L1C9JCN9 74 aa0.62□□□□□ -2.31
SNORA40.4-201ENST00000390971 IL3P08700 152 aa0.62□□□□□ -2.31
SNORA40.4-201ENST00000390971 UGT2B7P16662 529 aa0.62□□□□□ -2.31
SNORA40.4-201ENST00000390971 DMTNQ08495 405 aa0.62□□□□□ -2.31
SNORA40.4-201ENST00000390971 C1orf194Q5T5A4 169 aa0.62□□□□□ -2.31
SNORA40.4-201ENST00000390971 HIST2H3AQ71DI3 136 aa0.62□□□□□ -2.31
SNORA40.4-201ENST00000390971 SLC51BQ86UW2 128 aa0.62□□□□□ -2.31
SNORA40.4-201ENST00000390971 CHMP4BQ9H444 224 aaKnown RBP0.62□□□□□ -2.31
SNORA40.4-201ENST00000390971 POLR1DQ9Y2S0 133 aa0.62□□□□□ -2.31
SNORA40.4-201ENST00000390971 GGT3PA6NGU5 568 aa0.61□□□□□ -2.31
SNORA40.4-201ENST00000390971 GOLGA8MH3BSY2 632 aa0.61□□□□□ -2.31
SNORA40.4-201ENST00000390971 HLA-DRAP01903 254 aa0.61□□□□□ -2.31
SNORA40.4-201ENST00000390971 FGF6P10767 208 aa0.61□□□□□ -2.31
SNORA40.4-201ENST00000390971 UBE2IP63279 158 aaKnown RBP0.61□□□□□ -2.31
SNORA40.4-201ENST00000390971 LINC00526Q96FQ7 95 aa0.61□□□□□ -2.31
SNORA40.4-201ENST00000390971 PAQR5Q9NXK6 330 aaPredicted RBP0.61□□□□□ -2.31
SNORA40.4-201ENST00000390971 DKKL1Q9UK85 242 aa0.61□□□□□ -2.31
SNORA40.4-201ENST00000390971 PXMP4Q9Y6I8 212 aa0.61□□□□□ -2.31
SNORA40.4-201ENST00000390971 RAD50Q92878 1312 aa0.61□□□□□ -2.31
SNORA40.4-201ENST00000390971 SRP19P09132 144 aaKnown RBP0.6□□□□□ -2.31
SNORA40.4-201ENST00000390971 CCL1P22362 96 aa0.6□□□□□ -2.31
SNORA40.4-201ENST00000390971 SUPT4H1P63272 117 aaKnown RBP0.6□□□□□ -2.31
SNORA40.4-201ENST00000390971 FABP9Q0Z7S8 132 aa0.6□□□□□ -2.31
SNORA40.4-201ENST00000390971 AAED1Q7RTV5 226 aa0.6□□□□□ -2.31
SNORA40.4-201ENST00000390971 FUNDC1Q8IVP5 155 aa0.6□□□□□ -2.31
SNORA40.4-201ENST00000390971 C11orf40Q8WZ69 217 aa0.6□□□□□ -2.31
SNORA40.4-201ENST00000390971 ROPN1LQ96C74 230 aa0.6□□□□□ -2.31
SNORA40.4-201ENST00000390971 KCTD7Q96MP8 289 aa0.6□□□□□ -2.31
SNORA40.4-201ENST00000390971 OBSCN-AS1Q96MR7 158 aa0.6□□□□□ -2.31
SNORA40.4-201ENST00000390971 MED12LQ86YW9 2145 aa0.59□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms