RNA–Protein interactions for RNA: ENST00000390627.3

IGHV3-53-201, Transcript of immunoglobulin heavy variable 3-53, humanhuman

APPRIS P1 BASIC

Gene IGHV3-53, Length 571 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-53-201ENST00000390627 TSC22D3Q99576 134 aa11.72□□□□□ -0.53
IGHV3-53-201ENST00000390627 RTBDNQ9BSG5 229 aaPredicted RBP11.72□□□□□ -0.53
IGHV3-53-201ENST00000390627 COMMD5Q9GZQ3 224 aa11.72□□□□□ -0.53
IGHV3-53-201ENST00000390627 ZNF355PQ9NSJ1 428 aa11.72□□□□□ -0.53
IGHV3-53-201ENST00000390627 PTTG2Q9NZH5 202 aa11.72□□□□□ -0.53
IGHV3-53-201ENST00000390627 TEX13DA0A0J9YY54 714 aaPredicted RBP11.71□□□□□ -0.53
IGHV3-53-201ENST00000390627 BRI3O95415 125 aa11.71□□□□□ -0.53
IGHV3-53-201ENST00000390627 OR9G9P0C7N8 305 aa11.71□□□□□ -0.53
IGHV3-53-201ENST00000390627 APELAP0DMC3 54 aa11.71□□□□□ -0.53
IGHV3-53-201ENST00000390627 BAK1Q16611 211 aa11.71□□□□□ -0.53
IGHV3-53-201ENST00000390627 TRIM16LQ309B1 348 aa11.71□□□□□ -0.53
IGHV3-53-201ENST00000390627 THOC7Q6I9Y2 204 aaKnown RBP11.71□□□□□ -0.53
IGHV3-53-201ENST00000390627 FYTTD1Q96QD9 318 aaKnown RBP11.71□□□□□ -0.53
IGHV3-53-201ENST00000390627 SDHCQ99643 169 aaPredicted RBP11.71□□□□□ -0.53
IGHV3-53-201ENST00000390627 NAA60Q9H7X0 242 aa11.71□□□□□ -0.53
IGHV3-53-201ENST00000390627 COA4Q9NYJ1 87 aa11.71□□□□□ -0.53
IGHV3-53-201ENST00000390627 CMYA5Q8N3K9 4069 aa11.7□□□□□ -0.54
IGHV3-53-201ENST00000390627 TRAV3A0A0B4J244 114 aa11.7□□□□□ -0.54
IGHV3-53-201ENST00000390627 NAP1L6A6NFF2 107 aa11.7□□□□□ -0.54
IGHV3-53-201ENST00000390627 CRYM-AS1A6NIL9 109 aa11.7□□□□□ -0.54
IGHV3-53-201ENST00000390627 TEX22C9J3V5 150 aa11.7□□□□□ -0.54
IGHV3-53-201ENST00000390627 TRGV3P03979 118 aa11.7□□□□□ -0.54
IGHV3-53-201ENST00000390627 UCP1P25874 307 aa11.7□□□□□ -0.54
IGHV3-53-201ENST00000390627 MYCNOSP40205 109 aa11.7□□□□□ -0.54
IGHV3-53-201ENST00000390627 KIAA0141Q14154 515 aaPredicted RBP11.7□□□□□ -0.54
IGHV3-53-201ENST00000390627 H2BFWTQ7Z2G1 175 aa11.7□□□□□ -0.54
IGHV3-53-201ENST00000390627 ADAD2Q8NCV1 583 aaKnown RBP11.7□□□□□ -0.54
IGHV3-53-201ENST00000390627 CASTOR1Q8WTX7 329 aa11.7□□□□□ -0.54
IGHV3-53-201ENST00000390627 S100ZQ8WXG8 99 aa11.7□□□□□ -0.54
IGHV3-53-201ENST00000390627 SEC22AQ96IW7 307 aa11.7□□□□□ -0.54
IGHV3-53-201ENST00000390627 MS4A10Q96PG2 267 aa11.7□□□□□ -0.54
IGHV3-53-201ENST00000390627 SLC25A21Q9BQT8 299 aaPredicted RBP11.7□□□□□ -0.54
IGHV3-53-201ENST00000390627 SRSF8Q9BRL6 282 aaKnown RBP11.7□□□□□ -0.54
IGHV3-53-201ENST00000390627 AKIP1Q9NQ31 210 aa11.7□□□□□ -0.54
IGHV3-53-201ENST00000390627 FKBP11Q9NYL4 201 aa11.7□□□□□ -0.54
IGHV3-53-201ENST00000390627 PRNDQ9UKY0 176 aa11.7□□□□□ -0.54
IGHV3-53-201ENST00000390627 A0A0G2JLM5 398 aa11.69□□□□□ -0.54
IGHV3-53-201ENST00000390627 HMX3A6NHT5 357 aa11.69□□□□□ -0.54
IGHV3-53-201ENST00000390627 CCL24O00175 119 aa11.69□□□□□ -0.54
IGHV3-53-201ENST00000390627 IGKV1-39P01597 117 aa11.69□□□□□ -0.54
IGHV3-53-201ENST00000390627 IGKV1D-39P04432 117 aa11.69□□□□□ -0.54
IGHV3-53-201ENST00000390627 OR5AC1P0C628 307 aa11.69□□□□□ -0.54
IGHV3-53-201ENST00000390627 IL7P13232 177 aa11.69□□□□□ -0.54
IGHV3-53-201ENST00000390627 CD33P20138 364 aa11.69□□□□□ -0.54
IGHV3-53-201ENST00000390627 AKR1C2P52895 323 aa11.69□□□□□ -0.54
IGHV3-53-201ENST00000390627 OR2B8PP59922 312 aa11.69□□□□□ -0.54
IGHV3-53-201ENST00000390627 RUNX1Q01196 453 aa11.69□□□□□ -0.54
IGHV3-53-201ENST00000390627 DHODHQ02127 395 aa11.69□□□□□ -0.54
IGHV3-53-201ENST00000390627 SP6Q3SY56 376 aa11.69□□□□□ -0.54
IGHV3-53-201ENST00000390627 ETV3LQ6ZN32 361 aa11.69□□□□□ -0.54
IGHV3-53-201ENST00000390627 SGPP2Q8IWX5 399 aa11.69□□□□□ -0.54
IGHV3-53-201ENST00000390627 TTC9CQ8N5M4 171 aa11.69□□□□□ -0.54
IGHV3-53-201ENST00000390627 C7orf50Q9BRJ6 194 aaKnown RBP11.69□□□□□ -0.54
IGHV3-53-201ENST00000390627 QTRT1Q9BXR0 403 aaKnown RBP11.69□□□□□ -0.54
IGHV3-53-201ENST00000390627 GNB4Q9HAV0 340 aa11.69□□□□□ -0.54
IGHV3-53-201ENST00000390627 ZNF257Q9Y2Q1 563 aa11.69□□□□□ -0.54
IGHV3-53-201ENST00000390627 KCNIP3Q9Y2W7 256 aa11.69□□□□□ -0.54
IGHV3-53-201ENST00000390627 C15orf61A6NNL5 157 aa11.68□□□□□ -0.54
IGHV3-53-201ENST00000390627 NPIPB5A8MRT5 1133 aa11.68□□□□□ -0.54
IGHV3-53-201ENST00000390627 CENPXA8MT69 81 aa11.68□□□□□ -0.54
IGHV3-53-201ENST00000390627 E7EUB6 86 aa11.68□□□□□ -0.54
IGHV3-53-201ENST00000390627 DHFRP00374 187 aa11.68□□□□□ -0.54
IGHV3-53-201ENST00000390627 MYOD1P15172 320 aa11.68□□□□□ -0.54
IGHV3-53-201ENST00000390627 RBMS2Q15434 407 aaKnown RBP11.68□□□□□ -0.54
IGHV3-53-201ENST00000390627 DEFB136Q30KP8 78 aa11.68□□□□□ -0.54
IGHV3-53-201ENST00000390627 OR1L8Q8NGR8 309 aa11.68□□□□□ -0.54
IGHV3-53-201ENST00000390627 OR5B3Q8NH48 314 aa11.68□□□□□ -0.54
IGHV3-53-201ENST00000390627 OR4A16Q8NH70 328 aa11.68□□□□□ -0.54
IGHV3-53-201ENST00000390627 RNASE11Q8TAA1 199 aaKnown RBP11.68□□□□□ -0.54
IGHV3-53-201ENST00000390627 RAX2Q96IS3 184 aa11.68□□□□□ -0.54
IGHV3-53-201ENST00000390627 P2RX4Q99571 388 aa11.68□□□□□ -0.54
IGHV3-53-201ENST00000390627 CCDC32Q9BV29 185 aa11.68□□□□□ -0.54
IGHV3-53-201ENST00000390627 TMEM222Q9H0R3 208 aa11.68□□□□□ -0.54
IGHV3-53-201ENST00000390627 NSG2Q9Y328 171 aa11.68□□□□□ -0.54
IGHV3-53-201ENST00000390627 OR51B2Q9Y5P1 312 aa11.68□□□□□ -0.54
IGHV3-53-201ENST00000390627 C13orf42A0A1B0GVH6 325 aa11.67□□□□□ -0.54
IGHV3-53-201ENST00000390627 A0A1B0GW64 132 aa11.67□□□□□ -0.54
IGHV3-53-201ENST00000390627 I3L521 148 aa11.67□□□□□ -0.54
IGHV3-53-201ENST00000390627 LGALS1P09382 135 aaKnown RBP11.67□□□□□ -0.54
IGHV3-53-201ENST00000390627 TRAPPC2P0DI81 140 aa11.67□□□□□ -0.54
IGHV3-53-201ENST00000390627 TRAPPC2BP0DI82 140 aa11.67□□□□□ -0.54
IGHV3-53-201ENST00000390627 ANXA3P12429 323 aa11.67□□□□□ -0.54
IGHV3-53-201ENST00000390627 AKR1C4P17516 323 aa11.67□□□□□ -0.54
IGHV3-53-201ENST00000390627 PSMB6P28072 239 aa11.67□□□□□ -0.54
IGHV3-53-201ENST00000390627 HSD17B13Q7Z5P4 300 aaPredicted RBP11.67□□□□□ -0.54
IGHV3-53-201ENST00000390627 LINC00482Q8N8I6 264 aa11.67□□□□□ -0.54
IGHV3-53-201ENST00000390627 TMEM230Q96A57 120 aa11.67□□□□□ -0.54
IGHV3-53-201ENST00000390627 RRNAD1Q96FB5 475 aaKnown RBP11.67□□□□□ -0.54
IGHV3-53-201ENST00000390627 GALNT14Q96FL9 552 aa11.67□□□□□ -0.54
IGHV3-53-201ENST00000390627 USMG5Q96IX5 58 aa11.67□□□□□ -0.54
IGHV3-53-201ENST00000390627 OR5B12Q96R08 314 aa11.67□□□□□ -0.54
IGHV3-53-201ENST00000390627 TMEM14BQ9NUH8 114 aa11.67□□□□□ -0.54
IGHV3-53-201ENST00000390627 TEX50A0A1B0GTY4 177 aa11.66□□□□□ -0.54
IGHV3-53-201ENST00000390627 LINC00854A0A1B0GVQ3 168 aa11.66□□□□□ -0.54
IGHV3-53-201ENST00000390627 CGB1A6NKQ9 187 aa11.66□□□□□ -0.54
IGHV3-53-201ENST00000390627 FAM223BA6NKX1 122 aa11.66□□□□□ -0.54
IGHV3-53-201ENST00000390627 RBMXL2O75526 392 aaKnown RBP11.66□□□□□ -0.54
IGHV3-53-201ENST00000390627 CDS2O95674 445 aa11.66□□□□□ -0.54
IGHV3-53-201ENST00000390627 IGKV1-5P01602 117 aa11.66□□□□□ -0.54
IGHV3-53-201ENST00000390627 IGHV3-11P01762 117 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms