RNA–Protein interactions for RNA: ENST00000390612.3

IGHV4-28-201, Transcript of immunoglobulin heavy variable 4-28, humanhuman

APPRIS P1 BASIC

Gene IGHV4-28, Length 425 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28-201ENST00000390612 AREGP15514 252 aa8.72□□□□□ -1.01
IGHV4-28-201ENST00000390612 TBPP20226 339 aa8.72□□□□□ -1.01
IGHV4-28-201ENST00000390612 ZP3P21754 424 aa8.72□□□□□ -1.01
IGHV4-28-201ENST00000390612 OR2B8PP59922 312 aa8.72□□□□□ -1.01
IGHV4-28-201ENST00000390612 TSPAN5P62079 268 aa8.72□□□□□ -1.01
IGHV4-28-201ENST00000390612 LPCAT3Q6P1A2 487 aa8.72□□□□□ -1.01
IGHV4-28-201ENST00000390612 IL34Q6ZMJ4 242 aa8.72□□□□□ -1.01
IGHV4-28-201ENST00000390612 LAX1Q8IWV1 398 aa8.72□□□□□ -1.01
IGHV4-28-201ENST00000390612 CMTM1Q8IZ96 169 aa8.72□□□□□ -1.01
IGHV4-28-201ENST00000390612 NECAP1Q8NC96 275 aa8.72□□□□□ -1.01
IGHV4-28-201ENST00000390612 FCAMRQ8WWV6 532 aa8.72□□□□□ -1.01
IGHV4-28-201ENST00000390612 SRSF8Q9BRL6 282 aaKnown RBP8.72□□□□□ -1.01
IGHV4-28-201ENST00000390612 SLIRPQ9GZT3 109 aaKnown RBP8.72□□□□□ -1.01
IGHV4-28-201ENST00000390612 TMEM140Q9NV12 185 aa8.72□□□□□ -1.01
IGHV4-28-201ENST00000390612 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.71□□□□□ -1.02
IGHV4-28-201ENST00000390612 IGLC7A0M8Q6 106 aa8.71□□□□□ -1.02
IGHV4-28-201ENST00000390612 ANKRD34BA5PLL1 514 aa8.71□□□□□ -1.02
IGHV4-28-201ENST00000390612 H3BMQ9 156 aa8.71□□□□□ -1.02
IGHV4-28-201ENST00000390612 GABARAPH6UMI1 98 aa8.71□□□□□ -1.02
IGHV4-28-201ENST00000390612 M0QYG6 137 aa8.71□□□□□ -1.02
IGHV4-28-201ENST00000390612 MPPED1O15442 326 aa8.71□□□□□ -1.02
IGHV4-28-201ENST00000390612 CD3DP04234 171 aa8.71□□□□□ -1.02
IGHV4-28-201ENST00000390612 PTBP1P26599 531 aaKnown RBP eCLIP8.71□□□□□ -1.02
IGHV4-28-201ENST00000390612 PSMB6P28072 239 aa8.71□□□□□ -1.02
IGHV4-28-201ENST00000390612 ECI1P42126 302 aa8.71□□□□□ -1.02
IGHV4-28-201ENST00000390612 LPAR6P43657 344 aa8.71□□□□□ -1.02
IGHV4-28-201ENST00000390612 SSBP1Q04837 148 aaKnown RBP8.71□□□□□ -1.02
IGHV4-28-201ENST00000390612 C19orf35Q6ZS72 473 aa8.71□□□□□ -1.02
IGHV4-28-201ENST00000390612 ARRDC1Q8N5I2 433 aa8.71□□□□□ -1.02
IGHV4-28-201ENST00000390612 TMEM229BQ8NBD8 167 aa8.71□□□□□ -1.02
IGHV4-28-201ENST00000390612 FYTTD1Q96QD9 318 aaKnown RBP8.71□□□□□ -1.02
IGHV4-28-201ENST00000390612 SOSTQ9BQB4 213 aa8.71□□□□□ -1.02
IGHV4-28-201ENST00000390612 NXF2Q9GZY0 626 aaKnown RBP8.71□□□□□ -1.02
IGHV4-28-201ENST00000390612 ZNF256Q9Y2P7 627 aaPredicted RBP8.71□□□□□ -1.02
IGHV4-28-201ENST00000390612 CEPT1Q9Y6K0 416 aa8.71□□□□□ -1.02
IGHV4-28-201ENST00000390612 DNAH7Q8WXX0 4024 aa8.71□□□□□ -1.02
IGHV4-28-201ENST00000390612 MARCH11A6NNE9 402 aa8.7□□□□□ -1.02
IGHV4-28-201ENST00000390612 BMPR1BO00238 502 aa8.7□□□□□ -1.02
IGHV4-28-201ENST00000390612 CTDSPLO15194 276 aa8.7□□□□□ -1.02
IGHV4-28-201ENST00000390612 IGKV1-39P01597 117 aa8.7□□□□□ -1.02
IGHV4-28-201ENST00000390612 IGLV1-51P01701 117 aa8.7□□□□□ -1.02
IGHV4-28-201ENST00000390612 IGKV1D-39P04432 117 aa8.7□□□□□ -1.02
IGHV4-28-201ENST00000390612 RND3P61587 244 aa8.7□□□□□ -1.02
IGHV4-28-201ENST00000390612 MRPS10P82664 201 aaKnown RBP8.7□□□□□ -1.02
IGHV4-28-201ENST00000390612 ATP5G2Q06055 141 aa8.7□□□□□ -1.02
IGHV4-28-201ENST00000390612 DCTN2Q13561 401 aaKnown RBP8.7□□□□□ -1.02
IGHV4-28-201ENST00000390612 PHLDA2Q53GA4 152 aa8.7□□□□□ -1.02
IGHV4-28-201ENST00000390612 DEFB121Q5J5C9 76 aa8.7□□□□□ -1.02
IGHV4-28-201ENST00000390612 SLC38A6Q8IZM9 456 aa8.7□□□□□ -1.02
IGHV4-28-201ENST00000390612 DMBX1Q8NFW5 382 aa8.7□□□□□ -1.02
IGHV4-28-201ENST00000390612 ISOC1Q96CN7 298 aa8.7□□□□□ -1.02
IGHV4-28-201ENST00000390612 PRR25Q96S07 402 aa8.7□□□□□ -1.02
IGHV4-28-201ENST00000390612 B9D2Q9BPU9 175 aa8.7□□□□□ -1.02
IGHV4-28-201ENST00000390612 HRASLSQ9HDD0 168 aa8.7□□□□□ -1.02
IGHV4-28-201ENST00000390612 SIGLEC8Q9NYZ4 499 aa8.7□□□□□ -1.02
IGHV4-28-201ENST00000390612 RABL2AQ9UBK7 228 aaPredicted RBP8.7□□□□□ -1.02
IGHV4-28-201ENST00000390612 RABL2BQ9UNT1 228 aa8.7□□□□□ -1.02
IGHV4-28-201ENST00000390612 IGLV11-55A0A075B6I3 123 aa8.69□□□□□ -1.02
IGHV4-28-201ENST00000390612 TEX50A0A1B0GTY4 177 aa8.69□□□□□ -1.02
IGHV4-28-201ENST00000390612 RGS5O15539 181 aa8.69□□□□□ -1.02
IGHV4-28-201ENST00000390612 SAP30O75446 220 aa8.69□□□□□ -1.02
IGHV4-28-201ENST00000390612 OR2J3O76001 311 aa8.69□□□□□ -1.02
IGHV4-28-201ENST00000390612 NDUFB8O95169 186 aa8.69□□□□□ -1.02
IGHV4-28-201ENST00000390612 MECP2P51608 486 aaKnown RBP8.69□□□□□ -1.02
IGHV4-28-201ENST00000390612 EXOSC2Q13868 293 aaKnown RBP8.69□□□□□ -1.02
IGHV4-28-201ENST00000390612 C15orf32Q32M92 178 aa8.69□□□□□ -1.02
IGHV4-28-201ENST00000390612 RNASE12Q5GAN4 147 aaKnown RBP8.69□□□□□ -1.02
IGHV4-28-201ENST00000390612 RNASE10Q5GAN6 216 aaKnown RBP8.69□□□□□ -1.02
IGHV4-28-201ENST00000390612 FAM209BQ5JX69 171 aa8.69□□□□□ -1.02
IGHV4-28-201ENST00000390612 TBC1D26Q86UD7 250 aa8.69□□□□□ -1.02
IGHV4-28-201ENST00000390612 OR4D10Q8NGI6 311 aa8.69□□□□□ -1.02
IGHV4-28-201ENST00000390612 OR9G4Q8NGQ1 327 aa8.69□□□□□ -1.02
IGHV4-28-201ENST00000390612 TERB2Q8NHR7 220 aa8.69□□□□□ -1.02
IGHV4-28-201ENST00000390612 SMIM4Q8WVI0 70 aa8.69□□□□□ -1.02
IGHV4-28-201ENST00000390612 MRGPRFQ96AM1 343 aa8.69□□□□□ -1.02
IGHV4-28-201ENST00000390612 ZNF486Q96H40 463 aaPredicted RBP8.69□□□□□ -1.02
IGHV4-28-201ENST00000390612 SEC22AQ96IW7 307 aa8.69□□□□□ -1.02
IGHV4-28-201ENST00000390612 QTRT1Q9BXR0 403 aaKnown RBP8.69□□□□□ -1.02
IGHV4-28-201ENST00000390612 NDUFA4L2Q9NRX3 87 aa8.69□□□□□ -1.02
IGHV4-28-201ENST00000390612 NBEAL2Q6ZNJ1 2754 aa8.69□□□□□ -1.02
IGHV4-28-201ENST00000390612 KRASP01116 189 aa8.68□□□□□ -1.02
IGHV4-28-201ENST00000390612 IFNA6P05013 189 aa8.68□□□□□ -1.02
IGHV4-28-201ENST00000390612 CSN3P07498 182 aa8.68□□□□□ -1.02
IGHV4-28-201ENST00000390612 RPA2P15927 270 aa8.68□□□□□ -1.02
IGHV4-28-201ENST00000390612 SPNP16150 400 aa8.68□□□□□ -1.02
IGHV4-28-201ENST00000390612 HIST1H1BP16401 226 aaKnown RBP8.68□□□□□ -1.02
IGHV4-28-201ENST00000390612 G6PCP35575 357 aa8.68□□□□□ -1.02
IGHV4-28-201ENST00000390612 SYNJ2BPP57105 145 aa8.68□□□□□ -1.02
IGHV4-28-201ENST00000390612 TAS2R19P59542 299 aa8.68□□□□□ -1.02
IGHV4-28-201ENST00000390612 ERVK-16P61578 105 aa8.68□□□□□ -1.02
IGHV4-28-201ENST00000390612 WT1-ASQ06250 92 aa8.68□□□□□ -1.02
IGHV4-28-201ENST00000390612 THOC7Q6I9Y2 204 aaKnown RBP8.68□□□□□ -1.02
IGHV4-28-201ENST00000390612 STEAP1BQ6NZ63 245 aa8.68□□□□□ -1.02
IGHV4-28-201ENST00000390612 OR10W1Q8NGF6 305 aa8.68□□□□□ -1.02
IGHV4-28-201ENST00000390612 OR6Q1Q8NGQ2 317 aa8.68□□□□□ -1.02
IGHV4-28-201ENST00000390612 OR1L8Q8NGR8 309 aa8.68□□□□□ -1.02
IGHV4-28-201ENST00000390612 CCDC140Q96MF4 163 aa8.68□□□□□ -1.02
IGHV4-28-201ENST00000390612 OR4C12Q96R67 309 aa8.68□□□□□ -1.02
IGHV4-28-201ENST00000390612 ELOVL1Q9BW60 279 aa8.68□□□□□ -1.02
IGHV4-28-201ENST00000390612 COMMD5Q9GZQ3 224 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms