RNA–Protein interactions for RNA: ENST00000390489.1

TRAJ48-201, Transcript of T cell receptor alpha joining 48, humanhuman

APPRIS P1 BASIC

Gene TRAJ48, Length 63 nt, Biotype TR J gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ48-201ENST00000390489 DCSTAMPQ9H295 470 aa-0.92□□□□□ -2.56
TRAJ48-201ENST00000390489 SPACA1Q9HBV2 294 aa-0.92□□□□□ -2.56
TRAJ48-201ENST00000390489 TAS2R4Q9NYW5 299 aa-0.92□□□□□ -2.56
TRAJ48-201ENST00000390489 SCN3AQ9NY46 2000 aa-0.93□□□□□ -2.56
TRAJ48-201ENST00000390489 TTC28Q96AY4 2481 aa-0.93□□□□□ -2.56
TRAJ48-201ENST00000390489 SNAP29O95721 258 aa-0.93□□□□□ -2.56
TRAJ48-201ENST00000390489 MBP02144 154 aa-0.93□□□□□ -2.56
TRAJ48-201ENST00000390489 CLPSP04118 112 aa-0.93□□□□□ -2.56
TRAJ48-201ENST00000390489 STAG3L3P0CL85 134 aa-0.93□□□□□ -2.56
TRAJ48-201ENST00000390489 CFL1P23528 166 aaKnown RBP-0.93□□□□□ -2.56
TRAJ48-201ENST00000390489 RPL30P62888 115 aaKnown RBP-0.93□□□□□ -2.56
TRAJ48-201ENST00000390489 VAMP3Q15836 100 aa-0.93□□□□□ -2.56
TRAJ48-201ENST00000390489 LINC00322Q6ZN03 302 aaPredicted RBP-0.93□□□□□ -2.56
TRAJ48-201ENST00000390489 RASSF6Q6ZTQ3 369 aa-0.93□□□□□ -2.56
TRAJ48-201ENST00000390489 TMEM156Q8N614 296 aa-0.93□□□□□ -2.56
TRAJ48-201ENST00000390489 C3orf56Q8N813 242 aa-0.93□□□□□ -2.56
TRAJ48-201ENST00000390489 OR4A15Q8NGL6 344 aa-0.93□□□□□ -2.56
TRAJ48-201ENST00000390489 OR2Y1Q8NGV0 311 aa-0.93□□□□□ -2.56
TRAJ48-201ENST00000390489 RAB2BQ8WUD1 216 aa-0.93□□□□□ -2.56
TRAJ48-201ENST00000390489 ZC2HC1AQ96GY0 325 aa-0.93□□□□□ -2.56
TRAJ48-201ENST00000390489 CATSPER2Q96P56 530 aa-0.93□□□□□ -2.56
TRAJ48-201ENST00000390489 TLNRD1Q9H1K6 362 aa-0.93□□□□□ -2.56
TRAJ48-201ENST00000390489 RSL24D1Q9UHA3 163 aaKnown RBP-0.93□□□□□ -2.56
TRAJ48-201ENST00000390489 SNX24Q9Y343 169 aa-0.93□□□□□ -2.56
TRAJ48-201ENST00000390489 FAM208BQ5VWN6 2430 aa-0.93□□□□□ -2.56
TRAJ48-201ENST00000390489 DOCK3Q8IZD9 2030 aa-0.93□□□□□ -2.56
TRAJ48-201ENST00000390489 KNTC1P50748 2209 aa-0.93□□□□□ -2.56
TRAJ48-201ENST00000390489 ZANQ9Y493 2812 aa-0.94□□□□□ -2.56
TRAJ48-201ENST00000390489 F5H5K5 113 aa-0.94□□□□□ -2.56
TRAJ48-201ENST00000390489 K7ERQ8 282 aa-0.94□□□□□ -2.56
TRAJ48-201ENST00000390489 LEPROTO15243 131 aa-0.94□□□□□ -2.56
TRAJ48-201ENST00000390489 KRT7P08729 469 aa-0.94□□□□□ -2.56
TRAJ48-201ENST00000390489 F8A1P23610 371 aa-0.94□□□□□ -2.56
TRAJ48-201ENST00000390489 SPINT3P49223 89 aa-0.94□□□□□ -2.56
TRAJ48-201ENST00000390489 ZNF80P51504 273 aaPredicted RBP-0.94□□□□□ -2.56
TRAJ48-201ENST00000390489 H2BFSP57053 126 aa-0.94□□□□□ -2.56
TRAJ48-201ENST00000390489 FLOT2Q14254 428 aa-0.94□□□□□ -2.56
TRAJ48-201ENST00000390489 SPANXN5Q5MJ07 72 aa-0.94□□□□□ -2.56
TRAJ48-201ENST00000390489 LCN15Q6UWW0 184 aa-0.94□□□□□ -2.56
TRAJ48-201ENST00000390489 DEFB128Q7Z7B8 93 aa-0.94□□□□□ -2.56
TRAJ48-201ENST00000390489 SMIM12Q96EX1 92 aa-0.94□□□□□ -2.56
TRAJ48-201ENST00000390489 PSME2Q9UL46 239 aa-0.94□□□□□ -2.56
TRAJ48-201ENST00000390489 PCYT1BQ9Y5K3 369 aaPredicted RBP-0.94□□□□□ -2.56
TRAJ48-201ENST00000390489 TRAV1-1A0A0B4J248 108 aa-0.95□□□□□ -2.56
TRAJ48-201ENST00000390489 ZNF736B4DX44 427 aaPredicted RBP-0.95□□□□□ -2.56
TRAJ48-201ENST00000390489 FAAHO00519 579 aa-0.95□□□□□ -2.56
TRAJ48-201ENST00000390489 CCL25O15444 150 aa-0.95□□□□□ -2.56
TRAJ48-201ENST00000390489 NSA2O95478 260 aaKnown RBP-0.95□□□□□ -2.56
TRAJ48-201ENST00000390489 IGHV3-7P01780 117 aa-0.95□□□□□ -2.56
TRAJ48-201ENST00000390489 C1QAP02745 245 aa-0.95□□□□□ -2.56
TRAJ48-201ENST00000390489 MIFP14174 115 aa-0.95□□□□□ -2.56
TRAJ48-201ENST00000390489 NQO2P16083 231 aa-0.95□□□□□ -2.56
TRAJ48-201ENST00000390489 ADORA1P30542 326 aa-0.95□□□□□ -2.56
TRAJ48-201ENST00000390489 HLA-DRB3P79483 266 aa-0.95□□□□□ -2.56
TRAJ48-201ENST00000390489 RHOGP84095 191 aa-0.95□□□□□ -2.56
TRAJ48-201ENST00000390489 GNA13Q14344 377 aa-0.95□□□□□ -2.56
TRAJ48-201ENST00000390489 OR10J3Q5JRS4 329 aa-0.95□□□□□ -2.56
TRAJ48-201ENST00000390489 SBSNQ6UWP8 590 aa-0.95□□□□□ -2.56
TRAJ48-201ENST00000390489 ANKRD7Q92527 254 aa-0.95□□□□□ -2.56
TRAJ48-201ENST00000390489 ERMAPQ96PL5 475 aaPredicted RBP-0.95□□□□□ -2.56
TRAJ48-201ENST00000390489 RAB1BQ9H0U4 201 aa-0.95□□□□□ -2.56
TRAJ48-201ENST00000390489 TMEM14CQ9P0S9 112 aa-0.95□□□□□ -2.56
TRAJ48-201ENST00000390489 ZNF682O95780 498 aa-0.96□□□□□ -2.56
TRAJ48-201ENST00000390489 DNAL4O96015 105 aa-0.96□□□□□ -2.56
TRAJ48-201ENST00000390489 CSN1S1P47710 185 aa-0.96□□□□□ -2.56
TRAJ48-201ENST00000390489 ATP5J2P56134 94 aa-0.96□□□□□ -2.56
TRAJ48-201ENST00000390489 OR10A3P58181 314 aa-0.96□□□□□ -2.56
TRAJ48-201ENST00000390489 POLR2GP62487 172 aaKnown RBP eCLIP-0.96□□□□□ -2.56
TRAJ48-201ENST00000390489 SUPT4H1P63272 117 aaKnown RBP-0.96□□□□□ -2.56
TRAJ48-201ENST00000390489 FABP5Q01469 135 aa-0.96□□□□□ -2.56
TRAJ48-201ENST00000390489 OR4D1Q15615 310 aa-0.96□□□□□ -2.56
TRAJ48-201ENST00000390489 C1orf137Q5JT78 98 aa-0.96□□□□□ -2.56
TRAJ48-201ENST00000390489 TBC1D19Q8N5T2 526 aa-0.96□□□□□ -2.56
TRAJ48-201ENST00000390489 GPATCH11Q8N954 259 aa-0.96□□□□□ -2.56
TRAJ48-201ENST00000390489 TET1Q8NFU7 2136 aa-0.96□□□□□ -2.56
TRAJ48-201ENST00000390489 CCDC12Q8WUD4 166 aaPredicted RBP-0.96□□□□□ -2.56
TRAJ48-201ENST00000390489 SFT2D1Q8WV19 159 aa-0.96□□□□□ -2.56
TRAJ48-201ENST00000390489 OR8D2Q9GZM6 311 aa-0.96□□□□□ -2.56
TRAJ48-201ENST00000390489 PRELID1Q9Y255 219 aa-0.96□□□□□ -2.56
TRAJ48-201ENST00000390489 POLQO75417 2590 aa-0.96□□□□□ -2.56
TRAJ48-201ENST00000390489 CACNA1HO95180 2353 aa-0.97□□□□□ -2.56
TRAJ48-201ENST00000390489 YEATS4O95619 227 aa-0.97□□□□□ -2.56
TRAJ48-201ENST00000390489 REG1AP05451 166 aa-0.97□□□□□ -2.56
TRAJ48-201ENST00000390489 HTR1AP08908 422 aa-0.97□□□□□ -2.56
TRAJ48-201ENST00000390489 BAALC-AS2P0C853 105 aa-0.97□□□□□ -2.56
TRAJ48-201ENST00000390489 HLA-DMBP28068 263 aa-0.97□□□□□ -2.56
TRAJ48-201ENST00000390489 CD40LGP29965 261 aa-0.97□□□□□ -2.56
TRAJ48-201ENST00000390489 STX5Q13190 355 aa-0.97□□□□□ -2.56
TRAJ48-201ENST00000390489 CLEC12BQ2HXU8 276 aa-0.97□□□□□ -2.56
TRAJ48-201ENST00000390489 SPRNQ5BIV9 151 aa-0.97□□□□□ -2.56
TRAJ48-201ENST00000390489 XKRXQ6PP77 449 aa-0.97□□□□□ -2.56
TRAJ48-201ENST00000390489 TEX261Q6UWH6 196 aa-0.97□□□□□ -2.56
TRAJ48-201ENST00000390489 AHSA2Q719I0 299 aa-0.97□□□□□ -2.56
TRAJ48-201ENST00000390489 SSX8Q7RTT4 187 aa-0.97□□□□□ -2.56
TRAJ48-201ENST00000390489 LRRC6Q86X45 466 aa-0.97□□□□□ -2.56
TRAJ48-201ENST00000390489 OR52K2Q8NGK3 314 aa-0.97□□□□□ -2.56
TRAJ48-201ENST00000390489 OR10AC1Q8NH08 325 aa-0.97□□□□□ -2.56
TRAJ48-201ENST00000390489 DYNC2LI1Q8TCX1 351 aa-0.97□□□□□ -2.56
TRAJ48-201ENST00000390489 TMEM106AQ96A25 262 aa-0.97□□□□□ -2.56
TRAJ48-201ENST00000390489 CCL13Q99616 98 aa-0.97□□□□□ -2.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms