RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 IGHV3-48P01763 117 aa12.03□□□□□ -0.48
RTF1-201ENST00000389629 ACSF3Q4G176 576 aaPredicted RBP12.03□□□□□ -0.48
RTF1-201ENST00000389629 LINC01551Q86U37 167 aa12.03□□□□□ -0.48
RTF1-201ENST00000389629 PGLYRP4Q96LB8 373 aa12.03□□□□□ -0.48
RTF1-201ENST00000389629 PRR31Q5SQ13 230 aa12.03□□□□□ -0.48
RTF1-201ENST00000389629 FBXW9Q5XUX1 488 aa12.03□□□□□ -0.48
RTF1-201ENST00000389629 KCNS1Q96KK3 526 aa12.03□□□□□ -0.48
RTF1-201ENST00000389629 REPIN1Q9BWE0 567 aaKnown RBP12.03□□□□□ -0.48
RTF1-201ENST00000389629 C1QTNF5Q9BXJ0 243 aa12.03□□□□□ -0.48
RTF1-201ENST00000389629 PKIBQ9C010 78 aa12.03□□□□□ -0.48
RTF1-201ENST00000389629 CORTO00230 105 aa12.03□□□□□ -0.48
RTF1-201ENST00000389629 RAMP3O60896 148 aa12.03□□□□□ -0.48
RTF1-201ENST00000389629 HES1Q14469 280 aa12.03□□□□□ -0.48
RTF1-201ENST00000389629 DCAF10Q5QP82 559 aa12.03□□□□□ -0.48
RTF1-201ENST00000389629 S100A7AQ86SG5 101 aa12.03□□□□□ -0.48
RTF1-201ENST00000389629 LEAP2Q969E1 77 aa12.03□□□□□ -0.48
RTF1-201ENST00000389629 HES7Q9BYE0 225 aa12.03□□□□□ -0.48
RTF1-201ENST00000389629 OR51B2Q9Y5P1 312 aa12.03□□□□□ -0.48
RTF1-201ENST00000389629 AKAP6Q13023 2319 aa12.03□□□□□ -0.48
RTF1-201ENST00000389629 OR4C46A6NHA9 309 aa12.03□□□□□ -0.48
RTF1-201ENST00000389629 PPP1R14DQ9NXH3 145 aa12.03□□□□□ -0.48
RTF1-201ENST00000389629 PFN1P07737 140 aaKnown RBP12.02□□□□□ -0.48
RTF1-201ENST00000389629 PTGDSP41222 190 aa12.02□□□□□ -0.48
RTF1-201ENST00000389629 TMEM70Q9BUB7 260 aa12.02□□□□□ -0.48
RTF1-201ENST00000389629 MYO7BQ6PIF6 2116 aa12.02□□□□□ -0.48
RTF1-201ENST00000389629 H3BTX0 84 aa12.02□□□□□ -0.48
RTF1-201ENST00000389629 LYZP61626 148 aa12.02□□□□□ -0.48
RTF1-201ENST00000389629 DECR2Q9NUI1 292 aa12.02□□□□□ -0.48
RTF1-201ENST00000389629 PROCRQ9UNN8 238 aa12.02□□□□□ -0.48
RTF1-201ENST00000389629 TCF19Q9Y242 345 aa12.02□□□□□ -0.48
RTF1-201ENST00000389629 ADH4P08319 380 aa12.02□□□□□ -0.49
RTF1-201ENST00000389629 IL6RP08887 468 aaPredicted RBP12.02□□□□□ -0.49
RTF1-201ENST00000389629 KIR2DS2P43631 304 aa12.02□□□□□ -0.49
RTF1-201ENST00000389629 LCN12Q6JVE5 192 aa12.02□□□□□ -0.49
RTF1-201ENST00000389629 NABP2Q9BQ15 211 aa12.02□□□□□ -0.49
RTF1-201ENST00000389629 PMCHL2Q9BQD1 86 aa12.02□□□□□ -0.49
RTF1-201ENST00000389629 MS4A5Q9H3V2 200 aa12.02□□□□□ -0.49
RTF1-201ENST00000389629 TTTY12Q9BZ98 90 aa12.02□□□□□ -0.49
RTF1-201ENST00000389629 TNFSF15O95150 251 aa12.01□□□□□ -0.49
RTF1-201ENST00000389629 LINC00869P0C866 280 aa12.01□□□□□ -0.49
RTF1-201ENST00000389629 ZNF766Q5HY98 468 aa12.01□□□□□ -0.49
RTF1-201ENST00000389629 GNB4Q9HAV0 340 aa12.01□□□□□ -0.49
RTF1-201ENST00000389629 AMMECR1Q9Y4X0 333 aaPredicted RBP12.01□□□□□ -0.49
RTF1-201ENST00000389629 UMODP07911 640 aa12.01□□□□□ -0.49
RTF1-201ENST00000389629 ZNF83P51522 516 aa12.01□□□□□ -0.49
RTF1-201ENST00000389629 NEU1Q99519 415 aa12.01□□□□□ -0.49
RTF1-201ENST00000389629 A8MWL6 223 aa12.01□□□□□ -0.49
RTF1-201ENST00000389629 Q6ZRM9 215 aa12.01□□□□□ -0.49
RTF1-201ENST00000389629 IFNL4K9M1U5 179 aa12.01□□□□□ -0.49
RTF1-201ENST00000389629 GATA2P23769 480 aaPredicted RBP12.01□□□□□ -0.49
RTF1-201ENST00000389629 RNASEH2CQ8TDP1 164 aaKnown RBP12.01□□□□□ -0.49
RTF1-201ENST00000389629 SSBP4Q9BWG4 385 aaPredicted RBP12.01□□□□□ -0.49
RTF1-201ENST00000389629 ABCA1O95477 2261 aa12.01□□□□□ -0.49
RTF1-201ENST00000389629 WNT9BO14905 357 aa12□□□□□ -0.49
RTF1-201ENST00000389629 ZNF324O75467 553 aaPredicted RBP12□□□□□ -0.49
RTF1-201ENST00000389629 CA1P00915 261 aaPredicted RBP12□□□□□ -0.49
RTF1-201ENST00000389629 REG1BP48304 166 aa12□□□□□ -0.49
RTF1-201ENST00000389629 ZPBPQ9BS86 351 aa12□□□□□ -0.49
RTF1-201ENST00000389629 PRNDQ9UKY0 176 aa12□□□□□ -0.49
RTF1-201ENST00000389629 C12orf77C9JDV5 145 aa12□□□□□ -0.49
RTF1-201ENST00000389629 KRTCAP3Q53RY4 240 aa12□□□□□ -0.49
RTF1-201ENST00000389629 CDKN1AP38936 164 aa12□□□□□ -0.49
RTF1-201ENST00000389629 PLPPR1Q8TBJ4 325 aa12□□□□□ -0.49
RTF1-201ENST00000389629 POLEQ07864 2286 aa12□□□□□ -0.49
RTF1-201ENST00000389629 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12□□□□□ -0.49
RTF1-201ENST00000389629 A0A1W2PRD5 423 aa12□□□□□ -0.49
RTF1-201ENST00000389629 A0A1W2PRF3 423 aa12□□□□□ -0.49
RTF1-201ENST00000389629 A0A1W2PRM7 423 aa12□□□□□ -0.49
RTF1-201ENST00000389629 PGPA6NDG6 321 aa12□□□□□ -0.49
RTF1-201ENST00000389629 LYPD6BQ8NI32 183 aa12□□□□□ -0.49
RTF1-201ENST00000389629 DNASE2BQ8WZ79 361 aa12□□□□□ -0.49
RTF1-201ENST00000389629 F11RQ9Y624 299 aaKnown RBP12□□□□□ -0.49
RTF1-201ENST00000389629 TRAV24A0A0B4J272 114 aa11.99□□□□□ -0.49
RTF1-201ENST00000389629 CELA3AP09093 270 aa11.99□□□□□ -0.49
RTF1-201ENST00000389629 LTBRP36941 435 aa11.99□□□□□ -0.49
RTF1-201ENST00000389629 RIPPLY3P57055 190 aa11.99□□□□□ -0.49
RTF1-201ENST00000389629 SARAFQ96BY9 339 aa11.99□□□□□ -0.49
RTF1-201ENST00000389629 GAL3ST2Q9H3Q3 398 aa11.99□□□□□ -0.49
RTF1-201ENST00000389629 DENND4AQ7Z401 1863 aa11.99□□□□□ -0.49
RTF1-201ENST00000389629 HLA-DRB1P01911 266 aa11.99□□□□□ -0.49
RTF1-201ENST00000389629 PRDX2P32119 198 aa11.99□□□□□ -0.49
RTF1-201ENST00000389629 TIMP3P35625 211 aa11.99□□□□□ -0.49
RTF1-201ENST00000389629 MOGAT3Q86VF5 341 aa11.99□□□□□ -0.49
RTF1-201ENST00000389629 HARBI1Q96MB7 349 aa11.99□□□□□ -0.49
RTF1-201ENST00000389629 ELOVL5Q9NYP7 299 aa11.99□□□□□ -0.49
RTF1-201ENST00000389629 IGFBP2P18065 325 aa11.99□□□□□ -0.49
RTF1-201ENST00000389629 TMEM97Q5BJF2 176 aa11.99□□□□□ -0.49
RTF1-201ENST00000389629 PRNTQ86SH4 94 aa11.99□□□□□ -0.49
RTF1-201ENST00000389629 SAP25Q8TEE9 199 aa11.99□□□□□ -0.49
RTF1-201ENST00000389629 SIGLEC12Q96PQ1 595 aa11.99□□□□□ -0.49
RTF1-201ENST00000389629 IGKV1-5P01602 117 aa11.99□□□□□ -0.49
RTF1-201ENST00000389629 VMA21Q3ZAQ7 101 aa11.99□□□□□ -0.49
RTF1-201ENST00000389629 MIR17HGQ75NE6 70 aa11.99□□□□□ -0.49
RTF1-201ENST00000389629 IMMP1LQ96LU5 166 aa11.99□□□□□ -0.49
RTF1-201ENST00000389629 SPOCK3Q9BQ16 436 aa11.99□□□□□ -0.49
RTF1-201ENST00000389629 TMEM210A6NLX4 147 aa11.98□□□□□ -0.49
RTF1-201ENST00000389629 C8orf88P0DMB2 117 aa11.98□□□□□ -0.49
RTF1-201ENST00000389629 UCP2P55851 309 aa11.98□□□□□ -0.49
RTF1-201ENST00000389629 TMEM177Q53S58 311 aa11.98□□□□□ -0.49
RTF1-201ENST00000389629 ZNF841Q6ZN19 808 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms