RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 PTBP1P26599 531 aaKnown RBP eCLIP12.58□□□□□ -0.4
HMGN1-203ENST00000380748 MRPS15P82914 257 aaKnown RBP12.58□□□□□ -0.4
HMGN1-203ENST00000380748 MAPKAPK5-AS1Q8N8E1 139 aa12.58□□□□□ -0.4
HMGN1-203ENST00000380748 GFI1Q99684 422 aa12.58□□□□□ -0.4
HMGN1-203ENST00000380748 RNF126Q9BV68 326 aa12.58□□□□□ -0.4
HMGN1-203ENST00000380748 MRPS7Q9Y2R9 242 aaKnown RBP12.58□□□□□ -0.4
HMGN1-203ENST00000380748 IGHV4-28A0A0C4DH34 117 aa12.57□□□□□ -0.4
HMGN1-203ENST00000380748 CDK1P06493 297 aa12.57□□□□□ -0.4
HMGN1-203ENST00000380748 WNT4P56705 351 aa12.57□□□□□ -0.4
HMGN1-203ENST00000380748 PLA2G7Q13093 441 aa12.57□□□□□ -0.4
HMGN1-203ENST00000380748 LGALS9BQ3B8N2 356 aa12.57□□□□□ -0.4
HMGN1-203ENST00000380748 OR56B1Q8NGI3 324 aa12.57□□□□□ -0.4
HMGN1-203ENST00000380748 RNF2Q99496 336 aa12.57□□□□□ -0.4
HMGN1-203ENST00000380748 PLGRKTQ9HBL7 147 aa12.57□□□□□ -0.4
HMGN1-203ENST00000380748 ETV7Q9Y603 341 aa12.57□□□□□ -0.4
HMGN1-203ENST00000380748 IGKV3-7A0A075B6H7 116 aa12.56□□□□□ -0.4
HMGN1-203ENST00000380748 SLC17A2O00624 439 aa12.56□□□□□ -0.4
HMGN1-203ENST00000380748 MYL12BO14950 172 aa12.56□□□□□ -0.4
HMGN1-203ENST00000380748 P0DMU3 169 aa12.56□□□□□ -0.4
HMGN1-203ENST00000380748 FAM231AP0DMU4 169 aa12.56□□□□□ -0.4
HMGN1-203ENST00000380748 FAM231CP0DMU5 169 aa12.56□□□□□ -0.4
HMGN1-203ENST00000380748 CLDN12P56749 244 aa12.56□□□□□ -0.4
HMGN1-203ENST00000380748 RPL8P62917 257 aaKnown RBP12.56□□□□□ -0.4
HMGN1-203ENST00000380748 IRF3Q14653 427 aa12.56□□□□□ -0.4
HMGN1-203ENST00000380748 HSD17B12Q53GQ0 312 aa12.56□□□□□ -0.4
HMGN1-203ENST00000380748 ZNF555Q8NEP9 628 aa12.56□□□□□ -0.4
HMGN1-203ENST00000380748 OR4S2Q8NH73 311 aa12.56□□□□□ -0.4
HMGN1-203ENST00000380748 CHRDL1Q9BU40 450 aa12.56□□□□□ -0.4
HMGN1-203ENST00000380748 RBMX2Q9Y388 322 aaKnown RBP12.56□□□□□ -0.4
HMGN1-203ENST00000380748 APOBP04114 4563 aaKnown RBP12.56□□□□□ -0.4
HMGN1-203ENST00000380748 IGKV1D-8A0A087WSZ0 117 aa12.55□□□□□ -0.4
HMGN1-203ENST00000380748 IGLC7A0M8Q6 106 aa12.55□□□□□ -0.4
HMGN1-203ENST00000380748 NDUFA4O00483 81 aa12.55□□□□□ -0.4
HMGN1-203ENST00000380748 AMBPP02760 352 aa12.55□□□□□ -0.4
HMGN1-203ENST00000380748 HLA-GP17693 338 aa12.55□□□□□ -0.4
HMGN1-203ENST00000380748 BRWD1-AS2P59051 145 aa12.55□□□□□ -0.4
HMGN1-203ENST00000380748 ELOA3CA0A087WX78 387 aaPredicted RBP12.54□□□□□ -0.4
HMGN1-203ENST00000380748 IGHV3-49A0A0A0MS15 119 aa12.54□□□□□ -0.4
HMGN1-203ENST00000380748 C15orf61A6NNL5 157 aa12.54□□□□□ -0.4
HMGN1-203ENST00000380748 K7EMT4 169 aa12.54□□□□□ -0.4
HMGN1-203ENST00000380748 MRPS14O60783 128 aaKnown RBP12.54□□□□□ -0.4
HMGN1-203ENST00000380748 IGLV2-14P01704 120 aa12.54□□□□□ -0.4
HMGN1-203ENST00000380748 RASSF2P50749 326 aa12.54□□□□□ -0.4
HMGN1-203ENST00000380748 CMC4P56277 68 aaPredicted RBP12.54□□□□□ -0.4
HMGN1-203ENST00000380748 OR2B8PP59922 312 aa12.54□□□□□ -0.4
HMGN1-203ENST00000380748 RAB11BQ15907 218 aa12.54□□□□□ -0.4
HMGN1-203ENST00000380748 GBGT1Q8N5D6 347 aa12.54□□□□□ -0.4
HMGN1-203ENST00000380748 MS4A15Q8N5U1 240 aa12.54□□□□□ -0.4
HMGN1-203ENST00000380748 VN1R17PQ8TDU5 208 aa12.54□□□□□ -0.4
HMGN1-203ENST00000380748 TCTEX1D2Q8WW35 142 aa12.54□□□□□ -0.4
HMGN1-203ENST00000380748 RAB3CQ96E17 227 aa12.54□□□□□ -0.4
HMGN1-203ENST00000380748 BSCL2Q96G97 398 aaPredicted RBP12.54□□□□□ -0.4
HMGN1-203ENST00000380748 SCRT1Q9BWW7 348 aa12.54□□□□□ -0.4
HMGN1-203ENST00000380748 SMPXQ9UHP9 88 aa12.54□□□□□ -0.4
HMGN1-203ENST00000380748 IGLV2-18A0A075B6J9 118 aa12.53□□□□□ -0.4
HMGN1-203ENST00000380748 CHEK1O14757 476 aa12.53□□□□□ -0.4
HMGN1-203ENST00000380748 CDK2AP2O75956 126 aa12.53□□□□□ -0.4
HMGN1-203ENST00000380748 UCHL1P09936 223 aa12.53□□□□□ -0.4
HMGN1-203ENST00000380748 CD36P16671 472 aa12.53□□□□□ -0.4
HMGN1-203ENST00000380748 ZFP1Q6P2D0 407 aa12.53□□□□□ -0.4
HMGN1-203ENST00000380748 THYN1Q9P016 225 aa12.53□□□□□ -0.4
HMGN1-203ENST00000380748 SPATA2Q9UM82 520 aa12.53□□□□□ -0.4
HMGN1-203ENST00000380748 AK6Q9Y3D8 172 aaKnown RBP12.53□□□□□ -0.4
HMGN1-203ENST00000380748 A0A075B6Q4 140 aa12.52□□□□□ -0.41
HMGN1-203ENST00000380748 DEFB131BA0A096LNP1 70 aa12.52□□□□□ -0.41
HMGN1-203ENST00000380748 IGHV3-21A0A0B4J1V1 117 aa12.52□□□□□ -0.41
HMGN1-203ENST00000380748 IGKV1D-13A0A0B4J2D9 117 aa12.52□□□□□ -0.41
HMGN1-203ENST00000380748 C15orf62A8K5M9 175 aa12.52□□□□□ -0.41
HMGN1-203ENST00000380748 DENRO43583 198 aaKnown RBP12.52□□□□□ -0.41
HMGN1-203ENST00000380748 IGKV1-13P0DP09 117 aa12.52□□□□□ -0.41
HMGN1-203ENST00000380748 GNB3P16520 340 aa12.52□□□□□ -0.41
HMGN1-203ENST00000380748 EIF4EBP1Q13541 118 aaPredicted RBP12.52□□□□□ -0.41
HMGN1-203ENST00000380748 LEMD1Q68G75 181 aa12.52□□□□□ -0.41
HMGN1-203ENST00000380748 SPSB3Q6PJ21 355 aa12.52□□□□□ -0.41
HMGN1-203ENST00000380748 Q6ZR54 194 aa12.52□□□□□ -0.41
HMGN1-203ENST00000380748 ZNF767PQ75MW2 155 aa12.52□□□□□ -0.41
HMGN1-203ENST00000380748 NANOGP1Q8N7R0 232 aa12.52□□□□□ -0.41
HMGN1-203ENST00000380748 FAM3DQ96BQ1 224 aa12.52□□□□□ -0.41
HMGN1-203ENST00000380748 ZNF414Q96IQ9 312 aa12.52□□□□□ -0.41
HMGN1-203ENST00000380748 GPHA2Q96T91 129 aa12.52□□□□□ -0.41
HMGN1-203ENST00000380748 RHPN1-AS1Q9BWJ2 59 aa12.52□□□□□ -0.41
HMGN1-203ENST00000380748 SMPD3Q9NY59 655 aaPredicted RBP12.52□□□□□ -0.41
HMGN1-203ENST00000380748 CELA1Q9UNI1 258 aa12.52□□□□□ -0.41
HMGN1-203ENST00000380748 IGHV7-4-1A0A0J9YVY3 117 aa12.51□□□□□ -0.41
HMGN1-203ENST00000380748 TMEM272A0A1B0GTI8 110 aa12.51□□□□□ -0.41
HMGN1-203ENST00000380748 F8W735 103 aaPredicted RBP12.51□□□□□ -0.41
HMGN1-203ENST00000380748 MFNGO00587 321 aa12.51□□□□□ -0.41
HMGN1-203ENST00000380748 GIG44P09565 113 aaPredicted RBP12.51□□□□□ -0.41
HMGN1-203ENST00000380748 MIFP14174 115 aa12.51□□□□□ -0.41
HMGN1-203ENST00000380748 NFYAP23511 347 aaPredicted RBP12.51□□□□□ -0.41
HMGN1-203ENST00000380748 C2orf76Q3KRA6 126 aa12.51□□□□□ -0.41
HMGN1-203ENST00000380748 TIMM50Q3ZCQ8 353 aa12.51□□□□□ -0.41
HMGN1-203ENST00000380748 AHSA2Q719I0 299 aa12.51□□□□□ -0.41
HMGN1-203ENST00000380748 CENPSQ8N2Z9 138 aa12.51□□□□□ -0.41
HMGN1-203ENST00000380748 HSD17B10Q99714 261 aaKnown RBP12.51□□□□□ -0.41
HMGN1-203ENST00000380748 C16orf90A8MZG2 172 aa12.5□□□□□ -0.41
HMGN1-203ENST00000380748 HRASP01112 189 aa12.5□□□□□ -0.41
HMGN1-203ENST00000380748 HLA-DQB1P01920 261 aa12.5□□□□□ -0.41
HMGN1-203ENST00000380748 FAM90A2PQ658T7 463 aa12.5□□□□□ -0.41
HMGN1-203ENST00000380748 TMEM116Q8NCL8 245 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms