RNA–Protein interactions for RNA: ENST00000380535.8

TNFSF13-203, Transcript of TNF superfamily member 13, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-203ENST00000380535 S100A2P29034 98 aa11.4□□□□□ -0.58
TNFSF13-203ENST00000380535 PPT1P50897 306 aa11.4□□□□□ -0.58
TNFSF13-203ENST00000380535 RPL31P62899 125 aaKnown RBP11.4□□□□□ -0.58
TNFSF13-203ENST00000380535 EWSR1Q01844 656 aaKnown RBP eCLIP11.4□□□□□ -0.58
TNFSF13-203ENST00000380535 ID3Q02535 119 aa11.4□□□□□ -0.58
TNFSF13-203ENST00000380535 PEA15Q15121 130 aa11.4□□□□□ -0.58
TNFSF13-203ENST00000380535 OR5R1Q8NH85 324 aa11.4□□□□□ -0.58
TNFSF13-203ENST00000380535 AGMATQ9BSE5 352 aa11.4□□□□□ -0.58
TNFSF13-203ENST00000380535 DCTN5Q9BTE1 182 aa11.4□□□□□ -0.58
TNFSF13-203ENST00000380535 SNHG12Q9BXW3 62 aa11.4□□□□□ -0.58
TNFSF13-203ENST00000380535 RBFOX2O43251 390 aaKnown RBP eCLIP11.4□□□□□ -0.59
TNFSF13-203ENST00000380535 TMEM155Q4W5P6 130 aa11.4□□□□□ -0.59
TNFSF13-203ENST00000380535 C8orf31Q8N9H6 132 aa11.4□□□□□ -0.59
TNFSF13-203ENST00000380535 OR10W1Q8NGF6 305 aa11.4□□□□□ -0.59
TNFSF13-203ENST00000380535 ZNF714Q96N38 554 aa11.4□□□□□ -0.59
TNFSF13-203ENST00000380535 ABHD14AQ9BUJ0 271 aa11.4□□□□□ -0.59
TNFSF13-203ENST00000380535 SCRT1Q9BWW7 348 aa11.4□□□□□ -0.59
TNFSF13-203ENST00000380535 SH3BGRL3Q9H299 93 aa11.4□□□□□ -0.59
TNFSF13-203ENST00000380535 SMCO4Q9NRQ5 59 aa11.4□□□□□ -0.59
TNFSF13-203ENST00000380535 RPUSD1Q9UJJ7 312 aaKnown RBP11.4□□□□□ -0.59
TNFSF13-203ENST00000380535 ARFGEF3Q5TH69 2177 aa11.4□□□□□ -0.59
TNFSF13-203ENST00000380535 FAM90A26D6RGX4 464 aa11.39□□□□□ -0.59
TNFSF13-203ENST00000380535 SOX15O60248 233 aa11.39□□□□□ -0.59
TNFSF13-203ENST00000380535 RBMXL2O75526 392 aaKnown RBP11.39□□□□□ -0.59
TNFSF13-203ENST00000380535 PRH1P02810 166 aa11.39□□□□□ -0.59
TNFSF13-203ENST00000380535 CEACAM3P40198 252 aa11.39□□□□□ -0.59
TNFSF13-203ENST00000380535 ELLP55199 621 aaPredicted RBP11.39□□□□□ -0.59
TNFSF13-203ENST00000380535 CXorf66Q5JRM2 361 aaPredicted RBP11.39□□□□□ -0.59
TNFSF13-203ENST00000380535 HEPN1Q6WQI6 88 aa11.39□□□□□ -0.59
TNFSF13-203ENST00000380535 TGIF2LYQ8IUE0 185 aa11.39□□□□□ -0.59
TNFSF13-203ENST00000380535 TMEM160Q9NX00 188 aa11.39□□□□□ -0.59
TNFSF13-203ENST00000380535 IGHV3-43A0A0B4J1X8 118 aa11.38□□□□□ -0.59
TNFSF13-203ENST00000380535 COLCA2A8K830 154 aa11.38□□□□□ -0.59
TNFSF13-203ENST00000380535 RAB29O14966 203 aa11.38□□□□□ -0.59
TNFSF13-203ENST00000380535 PITX3O75364 302 aa11.38□□□□□ -0.59
TNFSF13-203ENST00000380535 SNRPCP09234 159 aaKnown RBP11.38□□□□□ -0.59
TNFSF13-203ENST00000380535 IGHV3-43DP0DP04 118 aa11.38□□□□□ -0.59
TNFSF13-203ENST00000380535 ZNF585BQ52M93 769 aa11.38□□□□□ -0.59
TNFSF13-203ENST00000380535 RNF150Q9ULK6 438 aa11.38□□□□□ -0.59
TNFSF13-203ENST00000380535 MMP24Q9Y5R2 645 aa11.38□□□□□ -0.59
TNFSF13-203ENST00000380535 TRAV25A0A0B4J276 109 aa11.38□□□□□ -0.59
TNFSF13-203ENST00000380535 IGKV1-39P01597 117 aa11.38□□□□□ -0.59
TNFSF13-203ENST00000380535 IGKV1D-39P04432 117 aa11.38□□□□□ -0.59
TNFSF13-203ENST00000380535 GAMTQ14353 236 aa11.38□□□□□ -0.59
TNFSF13-203ENST00000380535 GPR146Q96CH1 333 aa11.38□□□□□ -0.59
TNFSF13-203ENST00000380535 ZZEF1O43149 2961 aa11.38□□□□□ -0.59
TNFSF13-203ENST00000380535 PKD1L2Q7Z442 2459 aa11.37□□□□□ -0.59
TNFSF13-203ENST00000380535 A0A0G2JRQ6 117 aa11.37□□□□□ -0.59
TNFSF13-203ENST00000380535 FAM24AA6NFZ4 105 aa11.37□□□□□ -0.59
TNFSF13-203ENST00000380535 A6NNC1 897 aa11.37□□□□□ -0.59
TNFSF13-203ENST00000380535 FAM90A9PA6NNJ1 464 aa11.37□□□□□ -0.59
TNFSF13-203ENST00000380535 DVL1O14640 695 aa11.37□□□□□ -0.59
TNFSF13-203ENST00000380535 C1QL1O75973 258 aa11.37□□□□□ -0.59
TNFSF13-203ENST00000380535 RBP4P02753 201 aa11.37□□□□□ -0.59
TNFSF13-203ENST00000380535 ARL3P36405 182 aa11.37□□□□□ -0.59
TNFSF13-203ENST00000380535 AKR1C3P42330 323 aa11.37□□□□□ -0.59
TNFSF13-203ENST00000380535 THBS3P49746 956 aa11.37□□□□□ -0.59
TNFSF13-203ENST00000380535 ZNF266Q14584 549 aa11.37□□□□□ -0.59
TNFSF13-203ENST00000380535 FAM53AQ6NSI3 398 aaPredicted RBP11.37□□□□□ -0.59
TNFSF13-203ENST00000380535 TCF23Q7RTU1 214 aa11.37□□□□□ -0.59
TNFSF13-203ENST00000380535 C15orf54Q8N8G6 183 aa11.37□□□□□ -0.59
TNFSF13-203ENST00000380535 EAF1Q96JC9 268 aaPredicted RBP11.37□□□□□ -0.59
TNFSF13-203ENST00000380535 EIF5A2Q9GZV4 153 aaKnown RBP11.37□□□□□ -0.59
TNFSF13-203ENST00000380535 SLC25A31Q9H0C2 315 aa11.37□□□□□ -0.59
TNFSF13-203ENST00000380535 IFI27L2Q9H2X8 130 aa11.37□□□□□ -0.59
TNFSF13-203ENST00000380535 ANKHD1Q8IWZ3 2542 aaKnown RBP11.37□□□□□ -0.59
TNFSF13-203ENST00000380535 IGSF23A1L1A6 192 aa11.37□□□□□ -0.59
TNFSF13-203ENST00000380535 CRYBA4P53673 196 aa11.37□□□□□ -0.59
TNFSF13-203ENST00000380535 FAM71F2Q6NXP2 309 aa11.37□□□□□ -0.59
TNFSF13-203ENST00000380535 DUX4L9Q6RFH8 374 aaPredicted RBP11.37□□□□□ -0.59
TNFSF13-203ENST00000380535 TMEM182Q6ZP80 229 aaPredicted RBP11.37□□□□□ -0.59
TNFSF13-203ENST00000380535 ZNF439Q8NDP4 499 aa11.37□□□□□ -0.59
TNFSF13-203ENST00000380535 LFNGQ8NES3 379 aa11.37□□□□□ -0.59
TNFSF13-203ENST00000380535 S1PR3Q99500 378 aa11.37□□□□□ -0.59
TNFSF13-203ENST00000380535 PBDC1Q9BVG4 233 aa11.37□□□□□ -0.59
TNFSF13-203ENST00000380535 LYRM2Q9NU23 88 aaPredicted RBP11.37□□□□□ -0.59
TNFSF13-203ENST00000380535 RALYQ9UKM9 306 aaKnown RBP11.37□□□□□ -0.59
TNFSF13-203ENST00000380535 ZFP30Q9Y2G7 519 aa11.37□□□□□ -0.59
TNFSF13-203ENST00000380535 USF3Q68DE3 2245 aa11.36□□□□□ -0.59
TNFSF13-203ENST00000380535 C20orf202A1L168 122 aa11.36□□□□□ -0.59
TNFSF13-203ENST00000380535 FBLL1A6NHQ2 334 aaKnown RBP11.36□□□□□ -0.59
TNFSF13-203ENST00000380535 WIPF1O43516 503 aa11.36□□□□□ -0.59
TNFSF13-203ENST00000380535 SSSCA1O60232 199 aa11.36□□□□□ -0.59
TNFSF13-203ENST00000380535 COL8A2P25067 703 aa11.36□□□□□ -0.59
TNFSF13-203ENST00000380535 DUTP33316 252 aaKnown RBP11.36□□□□□ -0.59
TNFSF13-203ENST00000380535 LTC4SQ16873 150 aa11.36□□□□□ -0.59
TNFSF13-203ENST00000380535 TMEM249Q2WGJ8 235 aa11.36□□□□□ -0.59
TNFSF13-203ENST00000380535 SLC25A48Q6ZT89 311 aaKnown RBP11.36□□□□□ -0.59
TNFSF13-203ENST00000380535 LINC00311Q8N616 119 aa11.36□□□□□ -0.59
TNFSF13-203ENST00000380535 OR8B3Q8NGG8 313 aa11.36□□□□□ -0.59
TNFSF13-203ENST00000380535 H1FXQ92522 213 aaKnown RBP11.36□□□□□ -0.59
TNFSF13-203ENST00000380535 OR8B2Q96RD0 313 aa11.36□□□□□ -0.59
TNFSF13-203ENST00000380535 RAB40CQ96S21 281 aa11.36□□□□□ -0.59
TNFSF13-203ENST00000380535 MAGT1Q9H0U3 335 aa11.36□□□□□ -0.59
TNFSF13-203ENST00000380535 KALRNO60229 2985 aa11.36□□□□□ -0.59
TNFSF13-203ENST00000380535 DIDO1Q9BTC0 2240 aaKnown RBP11.36□□□□□ -0.59
TNFSF13-203ENST00000380535 KIAA1324LA8MWY0 1029 aaPredicted RBP11.35□□□□□ -0.59
TNFSF13-203ENST00000380535 CYB5BO43169 146 aa11.35□□□□□ -0.59
TNFSF13-203ENST00000380535 HPRT1P00492 218 aa11.35□□□□□ -0.59
TNFSF13-203ENST00000380535 HERV-K104P63124 156 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms