RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 GRIFINA4D1Z8 144 aa13.59□□□□□ -0.23
COL2A1-202ENST00000380518 IGKV3-15P01624 115 aa13.59□□□□□ -0.23
COL2A1-202ENST00000380518 ADIPOQQ15848 244 aa13.59□□□□□ -0.23
COL2A1-202ENST00000380518 SSBP3Q9BWW4 388 aaPredicted RBP13.59□□□□□ -0.23
COL2A1-202ENST00000380518 AKIRIN1Q9H9L7 192 aaPredicted RBP13.59□□□□□ -0.23
COL2A1-202ENST00000380518 TMEM106BQ9NUM4 274 aa13.59□□□□□ -0.23
COL2A1-202ENST00000380518 C9orf172C9J069 976 aa13.58□□□□□ -0.23
COL2A1-202ENST00000380518 RTBDNQ9BSG5 229 aaPredicted RBP13.58□□□□□ -0.23
COL2A1-202ENST00000380518 HBBP68871 147 aa13.58□□□□□ -0.24
COL2A1-202ENST00000380518 LCN2P80188 198 aa13.58□□□□□ -0.24
COL2A1-202ENST00000380518 EFNB1P98172 346 aa13.58□□□□□ -0.24
COL2A1-202ENST00000380518 UBE2L6O14933 153 aa13.58□□□□□ -0.24
COL2A1-202ENST00000380518 IGFBP3P17936 291 aaPredicted RBP13.58□□□□□ -0.24
COL2A1-202ENST00000380518 HIST1H4GQ99525 98 aa13.58□□□□□ -0.24
COL2A1-202ENST00000380518 DOCK3Q8IZD9 2030 aa13.58□□□□□ -0.24
COL2A1-202ENST00000380518 TBX6O95947 436 aaPredicted RBP13.57□□□□□ -0.24
COL2A1-202ENST00000380518 PDLIM4P50479 330 aa13.57□□□□□ -0.24
COL2A1-202ENST00000380518 ESPL1Q14674 2120 aa13.57□□□□□ -0.24
COL2A1-202ENST00000380518 CLDND2Q8NHS1 167 aa13.57□□□□□ -0.24
COL2A1-202ENST00000380518 GPR82Q96P67 336 aa13.57□□□□□ -0.24
COL2A1-202ENST00000380518 MYOFQ9NZM1 2061 aa13.57□□□□□ -0.24
COL2A1-202ENST00000380518 RBFOX2O43251 390 aaKnown RBP eCLIP13.57□□□□□ -0.24
COL2A1-202ENST00000380518 SOD3P08294 240 aa13.57□□□□□ -0.24
COL2A1-202ENST00000380518 NBEAP1P0C6P0 100 aa13.57□□□□□ -0.24
COL2A1-202ENST00000380518 LY6EQ16553 131 aa13.57□□□□□ -0.24
COL2A1-202ENST00000380518 RAXQ9Y2V3 346 aa13.57□□□□□ -0.24
COL2A1-202ENST00000380518 DMRT1Q9Y5R6 373 aa13.57□□□□□ -0.24
COL2A1-202ENST00000380518 C17orf98A8MV24 154 aa13.57□□□□□ -0.24
COL2A1-202ENST00000380518 ATXN7O15265 892 aaPredicted RBP13.57□□□□□ -0.24
COL2A1-202ENST00000380518 PRSS2P07478 247 aa13.57□□□□□ -0.24
COL2A1-202ENST00000380518 OTX1P32242 354 aaPredicted RBP13.57□□□□□ -0.24
COL2A1-202ENST00000380518 FAM209BQ5JX69 171 aa13.57□□□□□ -0.24
COL2A1-202ENST00000380518 PROB1E7EW31 1015 aa13.57□□□□□ -0.24
COL2A1-202ENST00000380518 SIAH2O43255 324 aa13.57□□□□□ -0.24
COL2A1-202ENST00000380518 OR13A1Q8NGR1 328 aa13.57□□□□□ -0.24
COL2A1-202ENST00000380518 DPM3Q9P2X0 92 aa13.57□□□□□ -0.24
COL2A1-202ENST00000380518 IGHV3OR16-12A0A075B7B8 117 aa13.56□□□□□ -0.24
COL2A1-202ENST00000380518 H7C2G1 150 aa13.56□□□□□ -0.24
COL2A1-202ENST00000380518 CBLN1P23435 193 aa13.56□□□□□ -0.24
COL2A1-202ENST00000380518 PSG7Q13046 419 aa13.56□□□□□ -0.24
COL2A1-202ENST00000380518 ACSF3Q4G176 576 aaPredicted RBP13.56□□□□□ -0.24
COL2A1-202ENST00000380518 DNLZQ5SXM8 178 aa13.56□□□□□ -0.24
COL2A1-202ENST00000380518 MRPL14Q6P1L8 145 aaKnown RBP13.56□□□□□ -0.24
COL2A1-202ENST00000380518 IGHV3-35A0A0C4DH35 117 aa13.56□□□□□ -0.24
COL2A1-202ENST00000380518 TNFSF10P50591 281 aa13.56□□□□□ -0.24
COL2A1-202ENST00000380518 DLX6P56179 175 aa13.56□□□□□ -0.24
COL2A1-202ENST00000380518 FAM27E3Q08E93 113 aa13.56□□□□□ -0.24
COL2A1-202ENST00000380518 RNF222A6NCQ9 220 aa13.56□□□□□ -0.24
COL2A1-202ENST00000380518 TMEM183AQ8IXX5 376 aa13.56□□□□□ -0.24
COL2A1-202ENST00000380518 KIR2DL4Q99706 377 aa13.56□□□□□ -0.24
COL2A1-202ENST00000380518 IGLV3-12A0A075B6K2 115 aa13.56□□□□□ -0.24
COL2A1-202ENST00000380518 ICAM4Q14773 271 aa13.56□□□□□ -0.24
COL2A1-202ENST00000380518 FBLN5Q9UBX5 448 aa13.56□□□□□ -0.24
COL2A1-202ENST00000380518 MRPS18CQ9Y3D5 142 aaKnown RBP13.56□□□□□ -0.24
COL2A1-202ENST00000380518 KBTBD11-OT1A0A1B0GTJ5 212 aa13.55□□□□□ -0.24
COL2A1-202ENST00000380518 MRPL13Q9BYD1 178 aaKnown RBP13.55□□□□□ -0.24
COL2A1-202ENST00000380518 SPTBN2O15020 2390 aa13.55□□□□□ -0.24
COL2A1-202ENST00000380518 A8MXK9 166 aa13.55□□□□□ -0.24
COL2A1-202ENST00000380518 SRP19P09132 144 aaKnown RBP13.55□□□□□ -0.24
COL2A1-202ENST00000380518 LGALS3P17931 250 aaKnown RBP13.55□□□□□ -0.24
COL2A1-202ENST00000380518 KLRB1Q12918 225 aa13.55□□□□□ -0.24
COL2A1-202ENST00000380518 PAPPA-AS1Q5QFB9 102 aa13.55□□□□□ -0.24
COL2A1-202ENST00000380518 LINC01560Q8TB33 94 aa13.55□□□□□ -0.24
COL2A1-202ENST00000380518 PRDM6Q9NQX0 595 aa13.55□□□□□ -0.24
COL2A1-202ENST00000380518 IGHV2OR16-5A0A0B4J2B6 119 aa13.55□□□□□ -0.24
COL2A1-202ENST00000380518 PLP1P60201 277 aa13.55□□□□□ -0.24
COL2A1-202ENST00000380518 FAM90A1Q86YD7 464 aa13.55□□□□□ -0.24
COL2A1-202ENST00000380518 FAM216BQ8N7L0 139 aa13.55□□□□□ -0.24
COL2A1-202ENST00000380518 OR4D5Q8NGN0 318 aa13.55□□□□□ -0.24
COL2A1-202ENST00000380518 ZNF837Q96EG3 531 aaPredicted RBP13.55□□□□□ -0.24
COL2A1-202ENST00000380518 FOXI3A8MTJ6 420 aaPredicted RBP13.55□□□□□ -0.24
COL2A1-202ENST00000380518 CSRP2Q16527 193 aa13.55□□□□□ -0.24
COL2A1-202ENST00000380518 PRSS8Q16651 343 aa13.55□□□□□ -0.24
COL2A1-202ENST00000380518 SDK2Q58EX2 2172 aa13.54□□□□□ -0.24
COL2A1-202ENST00000380518 SNRPD3P62318 126 aaKnown RBP13.54□□□□□ -0.24
COL2A1-202ENST00000380518 MEF2CQ06413 473 aaPredicted RBP13.54□□□□□ -0.24
COL2A1-202ENST00000380518 WFIKKN1Q96NZ8 548 aa13.54□□□□□ -0.24
COL2A1-202ENST00000380518 TRBV20OR9-2A0A075B6H5 130 aa13.54□□□□□ -0.24
COL2A1-202ENST00000380518 CGAP01215 116 aa13.54□□□□□ -0.24
COL2A1-202ENST00000380518 KLK15Q9H2R5 256 aa13.54□□□□□ -0.24
COL2A1-202ENST00000380518 PARP14Q460N5 1801 aa13.54□□□□□ -0.24
COL2A1-202ENST00000380518 A0A0G2JMM0 328 aa13.54□□□□□ -0.24
COL2A1-202ENST00000380518 A0A1W2PPB8 328 aa13.54□□□□□ -0.24
COL2A1-202ENST00000380518 A0A1W2PRS3 328 aa13.54□□□□□ -0.24
COL2A1-202ENST00000380518 KIR3DP1A8MWS1 328 aa13.54□□□□□ -0.24
COL2A1-202ENST00000380518 IGFBP2P18065 325 aa13.54□□□□□ -0.24
COL2A1-202ENST00000380518 FAM159AQ6UWV7 190 aa13.54□□□□□ -0.24
COL2A1-202ENST00000380518 FBXL15Q9H469 300 aa13.54□□□□□ -0.24
COL2A1-202ENST00000380518 NR2C2APQ86WQ0 139 aa13.54□□□□□ -0.24
COL2A1-202ENST00000380518 CACNG8Q8WXS5 425 aa13.54□□□□□ -0.24
COL2A1-202ENST00000380518 PQLC2LA1A4F0 135 aa13.53□□□□□ -0.24
COL2A1-202ENST00000380518 CIRBPQ14011 172 aaKnown RBP13.53□□□□□ -0.24
COL2A1-202ENST00000380518 ZNF362Q5T0B9 420 aaPredicted RBP13.53□□□□□ -0.24
COL2A1-202ENST00000380518 IL36BQ9NZH7 164 aa13.53□□□□□ -0.24
COL2A1-202ENST00000380518 SCN4AP35499 1836 aa13.53□□□□□ -0.24
COL2A1-202ENST00000380518 HIST1H1AQ02539 215 aaPredicted RBP13.53□□□□□ -0.24
COL2A1-202ENST00000380518 TFF3Q07654 80 aa13.53□□□□□ -0.24
COL2A1-202ENST00000380518 PMCHL2Q9BQD1 86 aa13.53□□□□□ -0.24
COL2A1-202ENST00000380518 CBLN4Q9NTU7 201 aa13.53□□□□□ -0.24
COL2A1-202ENST00000380518 SCN2AQ99250 2005 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms