RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 CYP2G1PQ6ZSU1 146 aa6.31□□□□□ -1.4
CDKL5-202ENST00000379996 ANKHD1Q8IWZ3 2542 aaKnown RBP6.31□□□□□ -1.4
CDKL5-202ENST00000379996 IGKV1D-17A0A075B6S4 117 aa6.31□□□□□ -1.4
CDKL5-202ENST00000379996 PPIAL4EA0A075B759 164 aa6.31□□□□□ -1.4
CDKL5-202ENST00000379996 C15orf62A8K5M9 175 aa6.31□□□□□ -1.4
CDKL5-202ENST00000379996 PPIAL4DF5H284 164 aa6.31□□□□□ -1.4
CDKL5-202ENST00000379996 NXPH2O95156 264 aa6.31□□□□□ -1.4
CDKL5-202ENST00000379996 PPIAL4FP0DN26 164 aa6.31□□□□□ -1.4
CDKL5-202ENST00000379996 PDLIM4P50479 330 aa6.31□□□□□ -1.4
CDKL5-202ENST00000379996 FGF8P55075 233 aaPredicted RBP6.31□□□□□ -1.4
CDKL5-202ENST00000379996 GNB2P62879 340 aa6.31□□□□□ -1.4
CDKL5-202ENST00000379996 CCL8P80075 99 aa6.31□□□□□ -1.4
CDKL5-202ENST00000379996 COA6Q5JTJ3 125 aaKnown RBP6.31□□□□□ -1.4
CDKL5-202ENST00000379996 GFI1BQ5VTD9 330 aa6.31□□□□□ -1.4
CDKL5-202ENST00000379996 TCTEX1D1Q8N7M0 179 aa6.31□□□□□ -1.4
CDKL5-202ENST00000379996 TMEM170AQ8WVE7 144 aa6.31□□□□□ -1.4
CDKL5-202ENST00000379996 FRZBQ92765 325 aa6.31□□□□□ -1.4
CDKL5-202ENST00000379996 PINX1Q96BK5 328 aaKnown RBP6.31□□□□□ -1.4
CDKL5-202ENST00000379996 SNX22Q96L94 193 aa6.31□□□□□ -1.4
CDKL5-202ENST00000379996 GNG13Q9P2W3 67 aa6.31□□□□□ -1.4
CDKL5-202ENST00000379996 MIOXQ9UGB7 285 aa6.31□□□□□ -1.4
CDKL5-202ENST00000379996 LAMP3Q9UQV4 416 aa6.31□□□□□ -1.4
CDKL5-202ENST00000379996 PPIAL4AQ9Y536 164 aa6.31□□□□□ -1.4
CDKL5-202ENST00000379996 DMRT1Q9Y5R6 373 aa6.31□□□□□ -1.4
CDKL5-202ENST00000379996 ARFGEF3Q5TH69 2177 aa6.3□□□□□ -1.4
CDKL5-202ENST00000379996 FAM90A9PA6NNJ1 464 aa6.3□□□□□ -1.4
CDKL5-202ENST00000379996 RAB29O14966 203 aa6.3□□□□□ -1.4
CDKL5-202ENST00000379996 HBZP02008 142 aa6.3□□□□□ -1.4
CDKL5-202ENST00000379996 TFF1P04155 84 aa6.3□□□□□ -1.4
CDKL5-202ENST00000379996 CGB3P0DN86 165 aa6.3□□□□□ -1.4
CDKL5-202ENST00000379996 CGB7P0DN87 165 aa6.3□□□□□ -1.4
CDKL5-202ENST00000379996 GZMHP20718 246 aa6.3□□□□□ -1.4
CDKL5-202ENST00000379996 SLC38A11Q08AI6 406 aa6.3□□□□□ -1.4
CDKL5-202ENST00000379996 ZNF826PQ6ZT77 177 aa6.3□□□□□ -1.4
CDKL5-202ENST00000379996 CD177Q8N6Q3 437 aa6.3□□□□□ -1.4
CDKL5-202ENST00000379996 OR52L2PQ8NGH6 319 aa6.3□□□□□ -1.4
CDKL5-202ENST00000379996 IL1F10Q8WWZ1 152 aa6.3□□□□□ -1.4
CDKL5-202ENST00000379996 DDB2Q92466 427 aa6.3□□□□□ -1.4
CDKL5-202ENST00000379996 LURAP1Q96LR2 239 aa6.3□□□□□ -1.4
CDKL5-202ENST00000379996 LINC00574Q9H8X3 128 aa6.3□□□□□ -1.4
CDKL5-202ENST00000379996 HRNRQ86YZ3 2850 aaPredicted RBP6.3□□□□□ -1.4
CDKL5-202ENST00000379996 TMEM30CPA0ZSE6 113 aa6.3□□□□□ -1.4
CDKL5-202ENST00000379996 MAP1LC3B2A6NCE7 125 aa6.3□□□□□ -1.4
CDKL5-202ENST00000379996 KBTBD11O94819 623 aa6.3□□□□□ -1.4
CDKL5-202ENST00000379996 TRGC2P03986 189 aa6.3□□□□□ -1.4
CDKL5-202ENST00000379996 HTD2P86397 168 aa6.3□□□□□ -1.4
CDKL5-202ENST00000379996 TMEM30BQ3MIR4 351 aa6.3□□□□□ -1.4
CDKL5-202ENST00000379996 NEK7Q8TDX7 302 aa6.3□□□□□ -1.4
CDKL5-202ENST00000379996 GAFA1Q96PS6 74 aa6.3□□□□□ -1.4
CDKL5-202ENST00000379996 MAP1LC3BQ9GZQ8 125 aa6.3□□□□□ -1.4
CDKL5-202ENST00000379996 CTDSP1Q9GZU7 261 aa6.3□□□□□ -1.4
CDKL5-202ENST00000379996 OR2D2Q9H210 308 aa6.3□□□□□ -1.4
CDKL5-202ENST00000379996 TRAPPC2LQ9UL33 140 aa6.3□□□□□ -1.4
CDKL5-202ENST00000379996 TENM4Q6N022 2769 aa6.3□□□□□ -1.4
CDKL5-202ENST00000379996 UBE2L5PA0A1B0GUS4 154 aa6.29□□□□□ -1.4
CDKL5-202ENST00000379996 IFNA5P01569 189 aa6.29□□□□□ -1.4
CDKL5-202ENST00000379996 PRDX2P32119 198 aa6.29□□□□□ -1.4
CDKL5-202ENST00000379996 G6PCP35575 357 aa6.29□□□□□ -1.4
CDKL5-202ENST00000379996 LOXL3P58215 753 aa6.29□□□□□ -1.4
CDKL5-202ENST00000379996 HBG1P69891 147 aa6.29□□□□□ -1.4
CDKL5-202ENST00000379996 HBG2P69892 147 aa6.29□□□□□ -1.4
CDKL5-202ENST00000379996 CD69Q07108 199 aa6.29□□□□□ -1.4
CDKL5-202ENST00000379996 KIAA0141Q14154 515 aaPredicted RBP6.29□□□□□ -1.4
CDKL5-202ENST00000379996 KHDC1LQ5JSQ8 128 aa6.29□□□□□ -1.4
CDKL5-202ENST00000379996 TRAT1Q6PIZ9 186 aa6.29□□□□□ -1.4
CDKL5-202ENST00000379996 OR13A1Q8NGR1 328 aa6.29□□□□□ -1.4
CDKL5-202ENST00000379996 C8orf46Q8TAG6 207 aa6.29□□□□□ -1.4
CDKL5-202ENST00000379996 UBALD1Q8TB05 177 aa6.29□□□□□ -1.4
CDKL5-202ENST00000379996 CORO2AQ92828 525 aa6.29□□□□□ -1.4
CDKL5-202ENST00000379996 NPCDR1Q9BY65 106 aa6.29□□□□□ -1.4
CDKL5-202ENST00000379996 PRR14LQ5THK1 2151 aa6.29□□□□□ -1.4
CDKL5-202ENST00000379996 A1L4Q6 167 aa6.29□□□□□ -1.4
CDKL5-202ENST00000379996 RNF212BA8MTL3 300 aa6.29□□□□□ -1.4
CDKL5-202ENST00000379996 TMEM250H0YL14 139 aa6.29□□□□□ -1.4
CDKL5-202ENST00000379996 IGHV4-39P01824 125 aa6.29□□□□□ -1.4
CDKL5-202ENST00000379996 TRGC1P0CF51 173 aa6.29□□□□□ -1.4
CDKL5-202ENST00000379996 S100GP29377 79 aa6.29□□□□□ -1.4
CDKL5-202ENST00000379996 LINC00205P59089 165 aa6.29□□□□□ -1.4
CDKL5-202ENST00000379996 RPL23P62829 140 aaKnown RBP6.29□□□□□ -1.4
CDKL5-202ENST00000379996 MEF2BQ02080 365 aaPredicted RBP6.29□□□□□ -1.4
CDKL5-202ENST00000379996 ATP6V1FQ16864 119 aa6.29□□□□□ -1.4
CDKL5-202ENST00000379996 ZNF66Q6ZN08 573 aa6.29□□□□□ -1.4
CDKL5-202ENST00000379996 OR51G1Q8NGK1 321 aa6.29□□□□□ -1.4
CDKL5-202ENST00000379996 GATAD1Q8WUU5 269 aa6.29□□□□□ -1.4
CDKL5-202ENST00000379996 TCTEX1D2Q8WW35 142 aa6.29□□□□□ -1.4
CDKL5-202ENST00000379996 RAB1CQ92928 201 aa6.29□□□□□ -1.4
CDKL5-202ENST00000379996 NIT2Q9NQR4 276 aa6.29□□□□□ -1.4
CDKL5-202ENST00000379996 NKX6-3A6NJ46 265 aa6.29□□□□□ -1.4
CDKL5-202ENST00000379996 TYMSP04818 313 aa6.29□□□□□ -1.4
CDKL5-202ENST00000379996 IL6RP08887 468 aaPredicted RBP6.29□□□□□ -1.4
CDKL5-202ENST00000379996 COL8A2P25067 703 aa6.29□□□□□ -1.4
CDKL5-202ENST00000379996 S100PP25815 95 aa6.29□□□□□ -1.4
CDKL5-202ENST00000379996 VDAC2P45880 294 aaPredicted RBP6.29□□□□□ -1.4
CDKL5-202ENST00000379996 TMEM147Q9BVK8 224 aa6.29□□□□□ -1.4
CDKL5-202ENST00000379996 TPSG1Q9NRR2 321 aa6.29□□□□□ -1.4
CDKL5-202ENST00000379996 CLN8Q9UBY8 286 aa6.29□□□□□ -1.4
CDKL5-202ENST00000379996 ZFYVE26Q68DK2 2539 aa6.29□□□□□ -1.4
CDKL5-202ENST00000379996 CTXND1A0A1B0GTU2 59 aa6.28□□□□□ -1.4
CDKL5-202ENST00000379996 CYB5BO43169 146 aa6.28□□□□□ -1.4
CDKL5-202ENST00000379996 S100A6P06703 90 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms