RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 H1FNTQ75WM6 255 aaPredicted RBP6.27□□□□□ -1.41
CDKL5-201ENST00000379989 SPANXB1Q9NS25 103 aaPredicted RBP6.27□□□□□ -1.41
CDKL5-201ENST00000379989 KCNIP1Q9NZI2 227 aa6.27□□□□□ -1.41
CDKL5-201ENST00000379989 TRAPPC2LQ9UL33 140 aa6.27□□□□□ -1.41
CDKL5-201ENST00000379989 UFC1Q9Y3C8 167 aa6.27□□□□□ -1.41
CDKL5-201ENST00000379989 PRSS37A4D1T9 235 aa6.26□□□□□ -1.41
CDKL5-201ENST00000379989 HRKO00198 91 aa6.26□□□□□ -1.41
CDKL5-201ENST00000379989 CCL7P80098 99 aa6.26□□□□□ -1.41
CDKL5-201ENST00000379989 SFTPA2Q8IWL1 248 aa6.26□□□□□ -1.41
CDKL5-201ENST00000379989 PRR22Q8IZ63 422 aa6.26□□□□□ -1.41
CDKL5-201ENST00000379989 FADS6Q8N9I5 356 aa6.26□□□□□ -1.41
CDKL5-201ENST00000379989 OCC1Q8TAD7 63 aa6.26□□□□□ -1.41
CDKL5-201ENST00000379989 SPAG8Q99932 426 aaPredicted RBP6.26□□□□□ -1.41
CDKL5-201ENST00000379989 MS4A5Q9H3V2 200 aa6.26□□□□□ -1.41
CDKL5-201ENST00000379989 FAM206AQ9NX38 181 aa6.26□□□□□ -1.41
CDKL5-201ENST00000379989 DNAH14Q0VDD8 3507 aa6.26□□□□□ -1.41
CDKL5-201ENST00000379989 C5orf42Q9H799 3197 aa6.26□□□□□ -1.41
CDKL5-201ENST00000379989 FBLL1A6NHQ2 334 aaKnown RBP6.26□□□□□ -1.41
CDKL5-201ENST00000379989 SPINK4O60575 86 aa6.26□□□□□ -1.41
CDKL5-201ENST00000379989 HIST1H1EP10412 219 aaKnown RBP6.26□□□□□ -1.41
CDKL5-201ENST00000379989 TRIP6Q15654 476 aaKnown RBP6.26□□□□□ -1.41
CDKL5-201ENST00000379989 SLC35E4Q6ICL7 350 aa6.26□□□□□ -1.41
CDKL5-201ENST00000379989 FA2HQ7L5A8 372 aa6.26□□□□□ -1.41
CDKL5-201ENST00000379989 MMD2Q8IY49 270 aa6.26□□□□□ -1.41
CDKL5-201ENST00000379989 OR10X1Q8NGY0 326 aa6.26□□□□□ -1.41
CDKL5-201ENST00000379989 NUDT22Q9BRQ3 303 aa6.26□□□□□ -1.41
CDKL5-201ENST00000379989 TMEM70Q9BUB7 260 aa6.26□□□□□ -1.41
CDKL5-201ENST00000379989 A0A1W2PQM1 296 aa6.26□□□□□ -1.41
CDKL5-201ENST00000379989 ISLRO14498 428 aa6.26□□□□□ -1.41
CDKL5-201ENST00000379989 HSBP1O75506 76 aa6.26□□□□□ -1.41
CDKL5-201ENST00000379989 DKK1O94907 266 aa6.26□□□□□ -1.41
CDKL5-201ENST00000379989 KIR3DS1Q14943 382 aa6.26□□□□□ -1.41
CDKL5-201ENST00000379989 PRR31Q5SQ13 230 aa6.26□□□□□ -1.41
CDKL5-201ENST00000379989 DOK3Q7L591 496 aa6.26□□□□□ -1.41
CDKL5-201ENST00000379989 TAF15Q92804 592 aaKnown RBP eCLIP6.26□□□□□ -1.41
CDKL5-201ENST00000379989 RAB1CQ92928 201 aa6.26□□□□□ -1.41
CDKL5-201ENST00000379989 LSM10Q969L4 123 aaKnown RBP6.26□□□□□ -1.41
CDKL5-201ENST00000379989 NDFIP1Q9BT67 221 aa6.26□□□□□ -1.41
CDKL5-201ENST00000379989 UBE2J1Q9Y385 318 aaPredicted RBP6.26□□□□□ -1.41
CDKL5-201ENST00000379989 PTRH2Q9Y3E5 179 aaKnown RBP6.26□□□□□ -1.41
CDKL5-201ENST00000379989 C11orf98E9PRG8 122 aa6.25□□□□□ -1.41
CDKL5-201ENST00000379989 J3QR89 54 aa6.25□□□□□ -1.41
CDKL5-201ENST00000379989 K7EN84 100 aa6.25□□□□□ -1.41
CDKL5-201ENST00000379989 CRXO43186 299 aaPredicted RBP6.25□□□□□ -1.41
CDKL5-201ENST00000379989 CFHR2P36980 270 aa6.25□□□□□ -1.41
CDKL5-201ENST00000379989 REG1BP48304 166 aa6.25□□□□□ -1.41
CDKL5-201ENST00000379989 RPEL1Q2QD12 228 aa6.25□□□□□ -1.41
CDKL5-201ENST00000379989 GUSBP11Q6P575 273 aa6.25□□□□□ -1.41
CDKL5-201ENST00000379989 CRIP3Q6Q6R5 217 aa6.25□□□□□ -1.41
CDKL5-201ENST00000379989 SHISA5Q8N114 240 aa6.25□□□□□ -1.41
CDKL5-201ENST00000379989 OR4C12Q96R67 309 aa6.25□□□□□ -1.41
CDKL5-201ENST00000379989 DEFB126Q9BYW3 111 aa6.25□□□□□ -1.41
CDKL5-201ENST00000379989 APOA2P02652 100 aa6.25□□□□□ -1.41
CDKL5-201ENST00000379989 DEFA4P12838 97 aa6.25□□□□□ -1.41
CDKL5-201ENST00000379989 GNG4P50150 75 aa6.25□□□□□ -1.41
CDKL5-201ENST00000379989 COX19Q49B96 90 aa6.25□□□□□ -1.41
CDKL5-201ENST00000379989 ZNF585BQ52M93 769 aa6.25□□□□□ -1.41
CDKL5-201ENST00000379989 OR5D13Q8NGL4 314 aa6.25□□□□□ -1.41
CDKL5-201ENST00000379989 RNF133Q8WVZ7 376 aa6.25□□□□□ -1.41
CDKL5-201ENST00000379989 RAB37Q96AX2 223 aa6.25□□□□□ -1.41
CDKL5-201ENST00000379989 GPHA2Q96T91 129 aa6.25□□□□□ -1.41
CDKL5-201ENST00000379989 PBOV1Q9GZY1 135 aa6.25□□□□□ -1.41
CDKL5-201ENST00000379989 CENPMQ9NSP4 180 aa6.25□□□□□ -1.41
CDKL5-201ENST00000379989 B4GALT7Q9UBV7 327 aa6.25□□□□□ -1.41
CDKL5-201ENST00000379989 HILPDAQ9Y5L2 63 aa6.25□□□□□ -1.41
CDKL5-201ENST00000379989 ZNF816-ZNF321PA0A0X1KG74 233 aa6.24□□□□□ -1.41
CDKL5-201ENST00000379989 UBE2L5PA0A1B0GUS4 154 aa6.24□□□□□ -1.41
CDKL5-201ENST00000379989 hCG_38984A0A1B0GV85 526 aa6.24□□□□□ -1.41
CDKL5-201ENST00000379989 A6NDN8 102 aa6.24□□□□□ -1.41
CDKL5-201ENST00000379989 LIPT2A6NK58 231 aa6.24□□□□□ -1.41
CDKL5-201ENST00000379989 CA1P00915 261 aaPredicted RBP6.24□□□□□ -1.41
CDKL5-201ENST00000379989 ACP7Q6ZNF0 438 aa6.24□□□□□ -1.41
CDKL5-201ENST00000379989 C8orf86Q6ZUL3 223 aa6.24□□□□□ -1.41
CDKL5-201ENST00000379989 TPRX1Q8N7U7 411 aa6.24□□□□□ -1.41
CDKL5-201ENST00000379989 OR10G9Q8NGN4 311 aa6.24□□□□□ -1.41
CDKL5-201ENST00000379989 OR10G7Q8NGN6 311 aa6.24□□□□□ -1.41
CDKL5-201ENST00000379989 OR51E1Q8TCB6 317 aa6.24□□□□□ -1.41
CDKL5-201ENST00000379989 C10orf35Q96D05 121 aa6.24□□□□□ -1.41
CDKL5-201ENST00000379989 HSPB8Q9UJY1 196 aa6.24□□□□□ -1.41
CDKL5-201ENST00000379989 COA3Q9Y2R0 106 aaPredicted RBP6.24□□□□□ -1.41
CDKL5-201ENST00000379989 IGKV1-9A0A0C4DH69 117 aa6.24□□□□□ -1.41
CDKL5-201ENST00000379989 C21orf140B9A014 251 aa6.24□□□□□ -1.41
CDKL5-201ENST00000379989 SNAI2O43623 268 aa6.24□□□□□ -1.41
CDKL5-201ENST00000379989 SRSF6Q13247 344 aaKnown RBP6.24□□□□□ -1.41
CDKL5-201ENST00000379989 TBC1D26Q86UD7 250 aa6.24□□□□□ -1.41
CDKL5-201ENST00000379989 DEFB119Q8N690 84 aa6.24□□□□□ -1.41
CDKL5-201ENST00000379989 ZNF611Q8N823 705 aa6.24□□□□□ -1.41
CDKL5-201ENST00000379989 OR8B12Q8NGG6 310 aa6.24□□□□□ -1.41
CDKL5-201ENST00000379989 IMMP1LQ96LU5 166 aa6.24□□□□□ -1.41
CDKL5-201ENST00000379989 MBNL3Q9NUK0 354 aaKnown RBP6.24□□□□□ -1.41
CDKL5-201ENST00000379989 C1RLQ9NZP8 487 aa6.24□□□□□ -1.41
CDKL5-201ENST00000379989 IGHV1-45A0A0A0MS14 117 aa6.24□□□□□ -1.41
CDKL5-201ENST00000379989 TRAV38-1A0A0B4J264 116 aa6.24□□□□□ -1.41
CDKL5-201ENST00000379989 A0A0G2JRQ6 117 aa6.24□□□□□ -1.41
CDKL5-201ENST00000379989 HELTA6NFD8 242 aa6.24□□□□□ -1.41
CDKL5-201ENST00000379989 PRR33A8MZF0 331 aa6.24□□□□□ -1.41
CDKL5-201ENST00000379989 HBZP02008 142 aa6.24□□□□□ -1.41
CDKL5-201ENST00000379989 FOLR3P41439 243 aa6.24□□□□□ -1.41
CDKL5-201ENST00000379989 DSCR4P56555 118 aaPredicted RBP6.24□□□□□ -1.41
CDKL5-201ENST00000379989 SLC35B1P78383 322 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms