RNA–Protein interactions for RNA: ENST00000378512.5

RER1-202, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 1 (best) BASIC

Gene RER1, Length 1,404 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-202ENST00000378512 PTBP1P26599 531 aaKnown RBP eCLIP13.05□□□□□ -0.32
RER1-202ENST00000378512 DGCR2P98153 550 aa13.05□□□□□ -0.32
RER1-202ENST00000378512 ACSM6Q6P461 480 aa13.05□□□□□ -0.32
RER1-202ENST00000378512 SLC25A42Q86VD7 318 aa13.05□□□□□ -0.32
RER1-202ENST00000378512 FAM223AQ8IWN6 122 aa13.05□□□□□ -0.32
RER1-202ENST00000378512 TMEM229BQ8NBD8 167 aa13.05□□□□□ -0.32
RER1-202ENST00000378512 FCAMRQ8WWV6 532 aa13.05□□□□□ -0.32
RER1-202ENST00000378512 PRR25Q96S07 402 aa13.05□□□□□ -0.32
RER1-202ENST00000378512 B9D2Q9BPU9 175 aa13.05□□□□□ -0.32
RER1-202ENST00000378512 AKIP1Q9NQ31 210 aa13.05□□□□□ -0.32
RER1-202ENST00000378512 RYR3Q15413 4870 aa13.05□□□□□ -0.32
RER1-202ENST00000378512 TRAV3A0A0B4J244 114 aa13.05□□□□□ -0.32
RER1-202ENST00000378512 HMX3A6NHT5 357 aa13.05□□□□□ -0.32
RER1-202ENST00000378512 MARCH11A6NNE9 402 aa13.05□□□□□ -0.32
RER1-202ENST00000378512 M0QYG6 137 aa13.05□□□□□ -0.32
RER1-202ENST00000378512 MPPED1O15442 326 aa13.05□□□□□ -0.32
RER1-202ENST00000378512 CTRB1P17538 263 aa13.05□□□□□ -0.32
RER1-202ENST00000378512 OR2B8PP59922 312 aa13.05□□□□□ -0.32
RER1-202ENST00000378512 CTRB2Q6GPI1 263 aa13.05□□□□□ -0.32
RER1-202ENST00000378512 ZNF429Q86V71 674 aa13.05□□□□□ -0.32
RER1-202ENST00000378512 SLC38A6Q8IZM9 456 aa13.05□□□□□ -0.32
RER1-202ENST00000378512 SMIM4Q8WVI0 70 aa13.05□□□□□ -0.32
RER1-202ENST00000378512 SOSTQ9BQB4 213 aa13.05□□□□□ -0.32
RER1-202ENST00000378512 RBM38Q9H0Z9 239 aaKnown RBP13.05□□□□□ -0.32
RER1-202ENST00000378512 TMEM140Q9NV12 185 aa13.05□□□□□ -0.32
RER1-202ENST00000378512 SORL1Q92673 2214 aa13.04□□□□□ -0.32
RER1-202ENST00000378512 MYOD1P15172 320 aa13.04□□□□□ -0.32
RER1-202ENST00000378512 RND3P61587 244 aa13.04□□□□□ -0.32
RER1-202ENST00000378512 RHOGP84095 191 aa13.04□□□□□ -0.32
RER1-202ENST00000378512 KLF5Q13887 457 aaPredicted RBP13.04□□□□□ -0.32
RER1-202ENST00000378512 RNASE10Q5GAN6 216 aaKnown RBP13.04□□□□□ -0.32
RER1-202ENST00000378512 NECAP1Q8NC96 275 aa13.04□□□□□ -0.32
RER1-202ENST00000378512 OR4D10Q8NGI6 311 aa13.04□□□□□ -0.32
RER1-202ENST00000378512 ZNF486Q96H40 463 aaPredicted RBP13.04□□□□□ -0.32
RER1-202ENST00000378512 FANCD2OSQ96PS1 177 aa13.04□□□□□ -0.32
RER1-202ENST00000378512 SRSF8Q9BRL6 282 aaKnown RBP13.04□□□□□ -0.32
RER1-202ENST00000378512 PRH1P02810 166 aa13.03□□□□□ -0.32
RER1-202ENST00000378512 ZP3P21754 424 aa13.03□□□□□ -0.32
RER1-202ENST00000378512 PSMB6P28072 239 aa13.03□□□□□ -0.32
RER1-202ENST00000378512 LPAR6P43657 344 aa13.03□□□□□ -0.32
RER1-202ENST00000378512 TAS2R19P59542 299 aa13.03□□□□□ -0.32
RER1-202ENST00000378512 DEFA5Q01523 94 aa13.03□□□□□ -0.32
RER1-202ENST00000378512 PHLDA2Q53GA4 152 aa13.03□□□□□ -0.32
RER1-202ENST00000378512 RNASE12Q5GAN4 147 aaKnown RBP13.03□□□□□ -0.32
RER1-202ENST00000378512 TBC1D26Q86UD7 250 aa13.03□□□□□ -0.32
RER1-202ENST00000378512 DIRAS2Q96HU8 199 aa13.03□□□□□ -0.32
RER1-202ENST00000378512 FYTTD1Q96QD9 318 aaKnown RBP13.03□□□□□ -0.32
RER1-202ENST00000378512 HRASLSQ9HDD0 168 aa13.03□□□□□ -0.32
RER1-202ENST00000378512 PEF1Q9UBV8 284 aaKnown RBP13.03□□□□□ -0.32
RER1-202ENST00000378512 DMRT1Q9Y5R6 373 aa13.03□□□□□ -0.32
RER1-202ENST00000378512 TENM3Q9P273 2699 aa13.02□□□□□ -0.32
RER1-202ENST00000378512 IGLC7A0M8Q6 106 aa13.02□□□□□ -0.33
RER1-202ENST00000378512 TRBV12-3P01733 135 aa13.02□□□□□ -0.33
RER1-202ENST00000378512 AREGP15514 252 aa13.02□□□□□ -0.33
RER1-202ENST00000378512 DMBX1Q8NFW5 382 aa13.02□□□□□ -0.33
RER1-202ENST00000378512 MRGPRFQ96AM1 343 aa13.02□□□□□ -0.33
RER1-202ENST00000378512 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.01□□□□□ -0.33
RER1-202ENST00000378512 GSTZ1O43708 216 aaPredicted RBP13.01□□□□□ -0.33
RER1-202ENST00000378512 NOL3O60936 208 aaKnown RBP13.01□□□□□ -0.33
RER1-202ENST00000378512 IGKV1-39P01597 117 aa13.01□□□□□ -0.33
RER1-202ENST00000378512 IGKV1D-39P04432 117 aa13.01□□□□□ -0.33
RER1-202ENST00000378512 IFNA6P05013 189 aa13.01□□□□□ -0.33
RER1-202ENST00000378512 S100GP29377 79 aa13.01□□□□□ -0.33
RER1-202ENST00000378512 THOC7Q6I9Y2 204 aaKnown RBP13.01□□□□□ -0.33
RER1-202ENST00000378512 STEAP1BQ6NZ63 245 aa13.01□□□□□ -0.33
RER1-202ENST00000378512 C19orf35Q6ZS72 473 aa13.01□□□□□ -0.33
RER1-202ENST00000378512 TERB2Q8NHR7 220 aa13.01□□□□□ -0.33
RER1-202ENST00000378512 SEC22AQ96IW7 307 aa13.01□□□□□ -0.33
RER1-202ENST00000378512 LSM4Q9Y4Z0 139 aaKnown RBP13.01□□□□□ -0.33
RER1-202ENST00000378512 IGLV11-55A0A075B6I3 123 aa13□□□□□ -0.33
RER1-202ENST00000378512 ANKRD34BA5PLL1 514 aa13□□□□□ -0.33
RER1-202ENST00000378512 ZNF701M0R085 212 aaPredicted RBP13□□□□□ -0.33
RER1-202ENST00000378512 KRASP01116 189 aa13□□□□□ -0.33
RER1-202ENST00000378512 TNFSF8P32971 234 aa13□□□□□ -0.33
RER1-202ENST00000378512 G6PCP35575 357 aa13□□□□□ -0.33
RER1-202ENST00000378512 ECI1P42126 302 aa13□□□□□ -0.33
RER1-202ENST00000378512 ERVK-16P61578 105 aa13□□□□□ -0.33
RER1-202ENST00000378512 ATP5G2Q06055 141 aa13□□□□□ -0.33
RER1-202ENST00000378512 C15orf32Q32M92 178 aa13□□□□□ -0.33
RER1-202ENST00000378512 FAM209BQ5JX69 171 aa13□□□□□ -0.33
RER1-202ENST00000378512 COMMD5Q9GZQ3 224 aa13□□□□□ -0.33
RER1-202ENST00000378512 C6orf62Q9GZU0 229 aaPredicted RBP13□□□□□ -0.33
RER1-202ENST00000378512 TEX50A0A1B0GTY4 177 aa12.99□□□□□ -0.33
RER1-202ENST00000378512 BMPR1BO00238 502 aa12.99□□□□□ -0.33
RER1-202ENST00000378512 OR2J3O76001 311 aa12.99□□□□□ -0.33
RER1-202ENST00000378512 RAB3DO95716 219 aa12.99□□□□□ -0.33
RER1-202ENST00000378512 EXOSC2Q13868 293 aaKnown RBP12.99□□□□□ -0.33
RER1-202ENST00000378512 IL18Q14116 193 aa12.99□□□□□ -0.33
RER1-202ENST00000378512 IL34Q6ZMJ4 242 aa12.99□□□□□ -0.33
RER1-202ENST00000378512 QTRT1Q9BXR0 403 aaKnown RBP12.99□□□□□ -0.33
RER1-202ENST00000378512 NDUFA4L2Q9NRX3 87 aa12.99□□□□□ -0.33
RER1-202ENST00000378512 TMEM14BQ9NUH8 114 aa12.99□□□□□ -0.33
RER1-202ENST00000378512 ZNF256Q9Y2P7 627 aaPredicted RBP12.99□□□□□ -0.33
RER1-202ENST00000378512 HUWE1Q7Z6Z7 4374 aaKnown RBP12.99□□□□□ -0.33
RER1-202ENST00000378512 DPPA5A6NC42 116 aa12.98□□□□□ -0.33
RER1-202ENST00000378512 SAP30O75446 220 aa12.98□□□□□ -0.33
RER1-202ENST00000378512 DHFRP00374 187 aa12.98□□□□□ -0.33
RER1-202ENST00000378512 IGLV1-51P01701 117 aa12.98□□□□□ -0.33
RER1-202ENST00000378512 RPA2P15927 270 aa12.98□□□□□ -0.33
RER1-202ENST00000378512 HIST1H1BP16401 226 aaKnown RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms