RNA–Protein interactions for RNA: ENST00000378122.4

PCDHA9-201, Transcript of protocadherin alpha 9, humanhuman

BASIC

Gene PCDHA9, Length 6,900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-201ENST00000378122 A0A1B0GV72 72 aa10.2□□□□□ -0.78
PCDHA9-201ENST00000378122 TCRBV4S1A1TA0A5B7 111 aa10.2□□□□□ -0.78
PCDHA9-201ENST00000378122 SMIM13P0DJ93 91 aa10.2□□□□□ -0.78
PCDHA9-201ENST00000378122 TBR1Q16650 682 aa10.2□□□□□ -0.78
PCDHA9-201ENST00000378122 FAM214BQ7L5A3 538 aa10.2□□□□□ -0.78
PCDHA9-201ENST00000378122 C14orf144Q96I85 54 aa10.2□□□□□ -0.78
PCDHA9-201ENST00000378122 DNAJC4Q9NNZ3 241 aa10.2□□□□□ -0.78
PCDHA9-201ENST00000378122 TTC32Q5I0X7 151 aa10.2□□□□□ -0.78
PCDHA9-201ENST00000378122 SIGLEC12Q96PQ1 595 aa10.2□□□□□ -0.78
PCDHA9-201ENST00000378122 DPRXA6NFQ7 191 aa10.2□□□□□ -0.78
PCDHA9-201ENST00000378122 FAM90A26D6RGX4 464 aa10.2□□□□□ -0.78
PCDHA9-201ENST00000378122 FOXH1O75593 365 aa10.2□□□□□ -0.78
PCDHA9-201ENST00000378122 CENPWQ5EE01 88 aa10.2□□□□□ -0.78
PCDHA9-201ENST00000378122 SP5Q6BEB4 398 aaPredicted RBP10.2□□□□□ -0.78
PCDHA9-201ENST00000378122 STPG3Q8N7X2 389 aa10.2□□□□□ -0.78
PCDHA9-201ENST00000378122 MAPK1IP1LQ8NDC0 245 aa10.2□□□□□ -0.78
PCDHA9-201ENST00000378122 BEND2Q8NDZ0 799 aa10.2□□□□□ -0.78
PCDHA9-201ENST00000378122 ST6GALNAC6Q969X2 333 aa10.2□□□□□ -0.78
PCDHA9-201ENST00000378122 PKIBQ9C010 78 aa10.2□□□□□ -0.78
PCDHA9-201ENST00000378122 NPIPB7O75200 414 aa10.19□□□□□ -0.78
PCDHA9-201ENST00000378122 BTCP35070 178 aa10.19□□□□□ -0.78
PCDHA9-201ENST00000378122 C1QL2Q7Z5L3 287 aa10.19□□□□□ -0.78
PCDHA9-201ENST00000378122 SAXO1Q8IYX7 474 aa10.19□□□□□ -0.78
PCDHA9-201ENST00000378122 OR10AG1Q8NH19 301 aa10.19□□□□□ -0.78
PCDHA9-201ENST00000378122 WDYHV1Q96HA8 205 aa10.19□□□□□ -0.78
PCDHA9-201ENST00000378122 SCGB1A1P11684 91 aa10.19□□□□□ -0.78
PCDHA9-201ENST00000378122 TFF3Q07654 80 aa10.19□□□□□ -0.78
PCDHA9-201ENST00000378122 FAM53AQ6NSI3 398 aaPredicted RBP10.19□□□□□ -0.78
PCDHA9-201ENST00000378122 ST6GALNAC3Q8NDV1 305 aa10.19□□□□□ -0.78
PCDHA9-201ENST00000378122 PPIAL4CA0A0B4J2A2 164 aa10.19□□□□□ -0.78
PCDHA9-201ENST00000378122 RAMP1O60894 148 aa10.19□□□□□ -0.78
PCDHA9-201ENST00000378122 PPIAL4GP0DN37 164 aa10.19□□□□□ -0.78
PCDHA9-201ENST00000378122 ANOS1P23352 680 aa10.19□□□□□ -0.78
PCDHA9-201ENST00000378122 GCHFRP30047 84 aa10.19□□□□□ -0.78
PCDHA9-201ENST00000378122 CRYBA2P53672 197 aa10.19□□□□□ -0.78
PCDHA9-201ENST00000378122 HERPUD1Q15011 391 aa10.19□□□□□ -0.78
PCDHA9-201ENST00000378122 RTBDNQ9BSG5 229 aaPredicted RBP10.19□□□□□ -0.78
PCDHA9-201ENST00000378122 TRIOBPQ9H2D6 2365 aa10.19□□□□□ -0.78
PCDHA9-201ENST00000378122 GTF3C1Q12789 2109 aa10.19□□□□□ -0.78
PCDHA9-201ENST00000378122 PRR32B1ATL7 298 aa10.19□□□□□ -0.78
PCDHA9-201ENST00000378122 PPP1R17O96001 155 aa10.19□□□□□ -0.78
PCDHA9-201ENST00000378122 C8orf88P0DMB2 117 aa10.19□□□□□ -0.78
PCDHA9-201ENST00000378122 DRAM1Q8N682 238 aa10.19□□□□□ -0.78
PCDHA9-201ENST00000378122 KCNS1Q96KK3 526 aa10.19□□□□□ -0.78
PCDHA9-201ENST00000378122 INTS1Q8N201 2190 aaKnown RBP10.19□□□□□ -0.78
PCDHA9-201ENST00000378122 SRP19P09132 144 aaKnown RBP10.19□□□□□ -0.78
PCDHA9-201ENST00000378122 MRAPQ8TCY5 172 aa10.19□□□□□ -0.78
PCDHA9-201ENST00000378122 RNF222A6NCQ9 220 aa10.18□□□□□ -0.78
PCDHA9-201ENST00000378122 SLC17A3O00476 420 aa10.18□□□□□ -0.78
PCDHA9-201ENST00000378122 LGALS3P17931 250 aaKnown RBP10.18□□□□□ -0.78
PCDHA9-201ENST00000378122 HOXA5P20719 270 aa10.18□□□□□ -0.78
PCDHA9-201ENST00000378122 CX3CL1P78423 397 aa10.18□□□□□ -0.78
PCDHA9-201ENST00000378122 PEAR1Q5VY43 1037 aaPredicted RBP10.18□□□□□ -0.78
PCDHA9-201ENST00000378122 OR4C13Q8NGP0 309 aa10.18□□□□□ -0.78
PCDHA9-201ENST00000378122 CTHRC1Q96CG8 243 aa10.18□□□□□ -0.78
PCDHA9-201ENST00000378122 TBL2Q9Y4P3 447 aaKnown RBP10.18□□□□□ -0.78
PCDHA9-201ENST00000378122 IGHV1-69-2A0A0G2JMI3 117 aa10.18□□□□□ -0.78
PCDHA9-201ENST00000378122 VDAC2P45880 294 aaPredicted RBP10.18□□□□□ -0.78
PCDHA9-201ENST00000378122 PSG9Q00887 426 aa10.18□□□□□ -0.78
PCDHA9-201ENST00000378122 GCSAMLQ5JQS6 135 aa10.18□□□□□ -0.78
PCDHA9-201ENST00000378122 SSC4DQ8WTU2 575 aa10.18□□□□□ -0.78
PCDHA9-201ENST00000378122 GLMPQ8WWB7 406 aa10.18□□□□□ -0.78
PCDHA9-201ENST00000378122 RAX2Q96IS3 184 aa10.18□□□□□ -0.78
PCDHA9-201ENST00000378122 COX6A1P12074 109 aa10.18□□□□□ -0.78
PCDHA9-201ENST00000378122 UCP3P55916 312 aa10.18□□□□□ -0.78
PCDHA9-201ENST00000378122 ZNF415Q09FC8 603 aa10.18□□□□□ -0.78
PCDHA9-201ENST00000378122 C2orf83Q53S99 150 aa10.18□□□□□ -0.78
PCDHA9-201ENST00000378122 C8orf46Q8TAG6 207 aa10.18□□□□□ -0.78
PCDHA9-201ENST00000378122 PRB1P04280 392 aa10.18□□□□□ -0.78
PCDHA9-201ENST00000378122 LRRC37AA6NMS7 1700 aa10.18□□□□□ -0.78
PCDHA9-201ENST00000378122 KLF4O43474 513 aa10.18□□□□□ -0.78
PCDHA9-201ENST00000378122 ERASQ7Z444 233 aa10.18□□□□□ -0.78
PCDHA9-201ENST00000378122 PEF1Q9UBV8 284 aaKnown RBP10.18□□□□□ -0.78
PCDHA9-201ENST00000378122 ODAMA1E959 279 aa10.17□□□□□ -0.78
PCDHA9-201ENST00000378122 SNAI2O43623 268 aa10.17□□□□□ -0.78
PCDHA9-201ENST00000378122 CLDND2Q8NHS1 167 aa10.17□□□□□ -0.78
PCDHA9-201ENST00000378122 NABP2Q9BQ15 211 aa10.17□□□□□ -0.78
PCDHA9-201ENST00000378122 IL36BQ9NZH7 164 aa10.17□□□□□ -0.78
PCDHA9-201ENST00000378122 HSPE1P61604 102 aaKnown RBP10.17□□□□□ -0.78
PCDHA9-201ENST00000378122 OR4D5Q8NGN0 318 aa10.17□□□□□ -0.78
PCDHA9-201ENST00000378122 KLF14Q8TD94 323 aaPredicted RBP10.17□□□□□ -0.78
PCDHA9-201ENST00000378122 DOCK7Q96N67 2140 aa10.17□□□□□ -0.78
PCDHA9-201ENST00000378122 IGKV1D-43A0A0B4J1Z2 117 aa10.17□□□□□ -0.78
PCDHA9-201ENST00000378122 RRHO14718 337 aa10.17□□□□□ -0.78
PCDHA9-201ENST00000378122 IL6RP08887 468 aaPredicted RBP10.17□□□□□ -0.78
PCDHA9-201ENST00000378122 MC5RP33032 325 aa10.17□□□□□ -0.78
PCDHA9-201ENST00000378122 RPL39P5Q59GN2 51 aa10.17□□□□□ -0.78
PCDHA9-201ENST00000378122 SYT8Q8NBV8 401 aa10.17□□□□□ -0.78
PCDHA9-201ENST00000378122 OR5P3Q8WZ94 311 aa10.17□□□□□ -0.78
PCDHA9-201ENST00000378122 NPCDR1Q9BY65 106 aa10.17□□□□□ -0.78
PCDHA9-201ENST00000378122 SCO2A0A1W2PP80 73 aa10.17□□□□□ -0.78
PCDHA9-201ENST00000378122 IGHV3-11P01762 117 aa10.17□□□□□ -0.78
PCDHA9-201ENST00000378122 LHX2P50458 406 aa10.17□□□□□ -0.78
PCDHA9-201ENST00000378122 GALNT14Q96FL9 552 aa10.17□□□□□ -0.78
PCDHA9-201ENST00000378122 DLX6P56179 175 aa10.17□□□□□ -0.78
PCDHA9-201ENST00000378122 hCG_38984A0A1B0GV85 526 aa10.17□□□□□ -0.78
PCDHA9-201ENST00000378122 TBX6O95947 436 aaPredicted RBP10.17□□□□□ -0.78
PCDHA9-201ENST00000378122 COX6CP09669 75 aa10.17□□□□□ -0.78
PCDHA9-201ENST00000378122 PSMG3Q9BT73 122 aaPredicted RBP10.17□□□□□ -0.78
PCDHA9-201ENST00000378122 CFHR5Q9BXR6 569 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms