RNA–Protein interactions for RNA: ENST00000377625.6

TBC1D4-201, Transcript of TBC1 domain family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TBC1D4, Length 6,182 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D4-201ENST00000377625 SPTA1P02549 2419 aa16.1■□□□□ 0.17
TBC1D4-201ENST00000377625 C1QL2Q7Z5L3 287 aa16.09■□□□□ 0.17
TBC1D4-201ENST00000377625 FAM216BQ8N7L0 139 aa16.09■□□□□ 0.17
TBC1D4-201ENST00000377625 FBXL7Q9UJT9 491 aa16.09■□□□□ 0.17
TBC1D4-201ENST00000377625 GRIFINA4D1Z8 144 aa16.09■□□□□ 0.17
TBC1D4-201ENST00000377625 EGR1P18146 543 aa16.09■□□□□ 0.17
TBC1D4-201ENST00000377625 IFI27L2Q9H2X8 130 aa16.09■□□□□ 0.17
TBC1D4-201ENST00000377625 ZNF708P17019 499 aa16.09■□□□□ 0.17
TBC1D4-201ENST00000377625 HBBP68871 147 aa16.09■□□□□ 0.17
TBC1D4-201ENST00000377625 TM4SF5O14894 197 aa16.09■□□□□ 0.17
TBC1D4-201ENST00000377625 SOD3P08294 240 aa16.09■□□□□ 0.17
TBC1D4-201ENST00000377625 NEU4Q8WWR8 484 aaPredicted RBP16.09■□□□□ 0.17
TBC1D4-201ENST00000377625 OR11H4Q8NGC9 324 aa16.09■□□□□ 0.17
TBC1D4-201ENST00000377625 HIST1H2BAQ96A08 127 aa16.09■□□□□ 0.17
TBC1D4-201ENST00000377625 FOXA2Q9Y261 457 aaPredicted RBP16.09■□□□□ 0.17
TBC1D4-201ENST00000377625 OR13C6PQ8NH95 151 aa16.08■□□□□ 0.17
TBC1D4-201ENST00000377625 ZNF883P0CG24 379 aa16.08■□□□□ 0.16
TBC1D4-201ENST00000377625 CD69Q07108 199 aa16.08■□□□□ 0.16
TBC1D4-201ENST00000377625 BIVMQ86UB2 503 aa16.08■□□□□ 0.16
TBC1D4-201ENST00000377625 MRAP2Q96G30 205 aa16.08■□□□□ 0.16
TBC1D4-201ENST00000377625 ABHD17AQ96GS6 310 aa16.08■□□□□ 0.16
TBC1D4-201ENST00000377625 NPCDR1Q9BY65 106 aa16.08■□□□□ 0.16
TBC1D4-201ENST00000377625 TDRD15B5MCY1 1934 aaKnown RBP16.08■□□□□ 0.16
TBC1D4-201ENST00000377625 TRAV24A0A0B4J272 114 aa16.08■□□□□ 0.16
TBC1D4-201ENST00000377625 MYO16Q9Y6X6 1858 aa16.08■□□□□ 0.16
TBC1D4-201ENST00000377625 NPIPB9F8W1W9 429 aa16.07■□□□□ 0.16
TBC1D4-201ENST00000377625 NPIPB7O75200 414 aa16.07■□□□□ 0.16
TBC1D4-201ENST00000377625 NBEAP1P0C6P0 100 aa16.07■□□□□ 0.16
TBC1D4-201ENST00000377625 Q5BKY6 102 aa16.07■□□□□ 0.16
TBC1D4-201ENST00000377625 COL4A5P29400 1685 aa16.07■□□□□ 0.16
TBC1D4-201ENST00000377625 A0A0G2JLM5 398 aa16.07■□□□□ 0.16
TBC1D4-201ENST00000377625 M0R381 172 aa16.07■□□□□ 0.16
TBC1D4-201ENST00000377625 WFIKKN1Q96NZ8 548 aa16.07■□□□□ 0.16
TBC1D4-201ENST00000377625 CCDC88CQ9P219 2028 aa16.07■□□□□ 0.16
TBC1D4-201ENST00000377625 IGHV2OR16-5A0A0B4J2B6 119 aa16.07■□□□□ 0.16
TBC1D4-201ENST00000377625 PPP1R27Q86WC6 154 aa16.07■□□□□ 0.16
TBC1D4-201ENST00000377625 C1orf162Q8NEQ5 155 aaPredicted RBP16.07■□□□□ 0.16
TBC1D4-201ENST00000377625 FAM57AQ8TBR7 257 aa16.07■□□□□ 0.16
TBC1D4-201ENST00000377625 ZNFX1Q9P2E3 1918 aaKnown RBP16.07■□□□□ 0.16
TBC1D4-201ENST00000377625 ATOH7Q8N100 152 aa16.07■□□□□ 0.16
TBC1D4-201ENST00000377625 OR13A1Q8NGR1 328 aa16.07■□□□□ 0.16
TBC1D4-201ENST00000377625 ITLN2Q8WWU7 325 aaPredicted RBP16.07■□□□□ 0.16
TBC1D4-201ENST00000377625 FAM168AQ92567 244 aa16.07■□□□□ 0.16
TBC1D4-201ENST00000377625 TNFRSF18Q9Y5U5 241 aa16.07■□□□□ 0.16
TBC1D4-201ENST00000377625 UBR3Q6ZT12 1888 aa16.07■□□□□ 0.16
TBC1D4-201ENST00000377625 TEX45Q8NA69 505 aa16.06■□□□□ 0.16
TBC1D4-201ENST00000377625 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.06■□□□□ 0.16
TBC1D4-201ENST00000377625 IGKV1D-43A0A0B4J1Z2 117 aa16.06■□□□□ 0.16
TBC1D4-201ENST00000377625 EFEMP2O95967 443 aa16.06■□□□□ 0.16
TBC1D4-201ENST00000377625 ASIPP42127 132 aa16.06■□□□□ 0.16
TBC1D4-201ENST00000377625 TMEM101Q96IK0 257 aa16.06■□□□□ 0.16
TBC1D4-201ENST00000377625 BEX4Q9NWD9 120 aaPredicted RBP16.06■□□□□ 0.16
TBC1D4-201ENST00000377625 A0A0G2JMM0 328 aa16.06■□□□□ 0.16
TBC1D4-201ENST00000377625 A0A1W2PPB8 328 aa16.06■□□□□ 0.16
TBC1D4-201ENST00000377625 A0A1W2PRS3 328 aa16.06■□□□□ 0.16
TBC1D4-201ENST00000377625 KIR3DP1A8MWS1 328 aa16.06■□□□□ 0.16
TBC1D4-201ENST00000377625 AKIRIN1Q9H9L7 192 aaPredicted RBP16.06■□□□□ 0.16
TBC1D4-201ENST00000377625 H7C1H1 209 aa16.06■□□□□ 0.16
TBC1D4-201ENST00000377625 NAT1P18440 290 aa16.06■□□□□ 0.16
TBC1D4-201ENST00000377625 GPX4P36969 197 aaPredicted RBP16.06■□□□□ 0.16
TBC1D4-201ENST00000377625 WDR82Q6UXN9 313 aa16.06■□□□□ 0.16
TBC1D4-201ENST00000377625 TMEM136Q6ZRR5 245 aa16.06■□□□□ 0.16
TBC1D4-201ENST00000377625 KBTBD11-OT1A0A1B0GTJ5 212 aa16.05■□□□□ 0.16
TBC1D4-201ENST00000377625 PROB1E7EW31 1015 aa16.05■□□□□ 0.16
TBC1D4-201ENST00000377625 RTN4RL2Q86UN3 420 aa16.05■□□□□ 0.16
TBC1D4-201ENST00000377625 TM2D1Q9BX74 207 aa16.05■□□□□ 0.16
TBC1D4-201ENST00000377625 C21orf62Q9NYP8 219 aa16.05■□□□□ 0.16
TBC1D4-201ENST00000377625 C17orf98A8MV24 154 aa16.05■□□□□ 0.16
TBC1D4-201ENST00000377625 IGFBP2P18065 325 aa16.05■□□□□ 0.16
TBC1D4-201ENST00000377625 GPR183P32249 361 aa16.05■□□□□ 0.16
TBC1D4-201ENST00000377625 CEACAM1P13688 526 aa16.05■□□□□ 0.16
TBC1D4-201ENST00000377625 TMEM170BQ5T4T1 132 aa16.05■□□□□ 0.16
TBC1D4-201ENST00000377625 MRPL13Q9BYD1 178 aaKnown RBP16.05■□□□□ 0.16
TBC1D4-201ENST00000377625 RPRMQ9NS64 109 aa16.05■□□□□ 0.16
TBC1D4-201ENST00000377625 TMEM160Q9NX00 188 aa16.05■□□□□ 0.16
TBC1D4-201ENST00000377625 ERVH48-1M5A8F1 160 aa16.05■□□□□ 0.16
TBC1D4-201ENST00000377625 ARPC1AQ92747 370 aa16.05■□□□□ 0.16
TBC1D4-201ENST00000377625 TMEM250H0YL14 139 aa16.05■□□□□ 0.16
TBC1D4-201ENST00000377625 CGAP01215 116 aa16.05■□□□□ 0.16
TBC1D4-201ENST00000377625 C21orf62-AS1Q17RA5 79 aa16.05■□□□□ 0.16
TBC1D4-201ENST00000377625 RCC1LQ96I51 464 aaKnown RBP16.05■□□□□ 0.16
TBC1D4-201ENST00000377625 COL24A1Q17RW2 1714 aa16.04■□□□□ 0.16
TBC1D4-201ENST00000377625 CBLN1P23435 193 aa16.04■□□□□ 0.16
TBC1D4-201ENST00000377625 FOXA3P55318 350 aaPredicted RBP16.04■□□□□ 0.16
TBC1D4-201ENST00000377625 NHLRC3Q5JS37 347 aa16.04■□□□□ 0.16
TBC1D4-201ENST00000377625 DNAL4O96015 105 aa16.04■□□□□ 0.16
TBC1D4-201ENST00000377625 GGACTQ9BVM4 153 aa16.04■□□□□ 0.16
TBC1D4-201ENST00000377625 C7orf69Q9H7B7 122 aa16.04■□□□□ 0.16
TBC1D4-201ENST00000377625 IGHV1-2P23083 117 aa16.04■□□□□ 0.16
TBC1D4-201ENST00000377625 DUX3Q96PT4 197 aa16.04■□□□□ 0.16
TBC1D4-201ENST00000377625 PLSCR2Q9NRY7 297 aa16.04■□□□□ 0.16
TBC1D4-201ENST00000377625 OR11H12B2RN74 326 aa16.04■□□□□ 0.16
TBC1D4-201ENST00000377625 OR11H1Q8NG94 326 aa16.04■□□□□ 0.16
TBC1D4-201ENST00000377625 OR4X2Q8NGF9 303 aa16.04■□□□□ 0.16
TBC1D4-201ENST00000377625 OR11H2Q8NH07 326 aa16.04■□□□□ 0.16
TBC1D4-201ENST00000377625 C1QTNF5Q9BXJ0 243 aa16.04■□□□□ 0.16
TBC1D4-201ENST00000377625 PSG7Q13046 419 aa16.03■□□□□ 0.16
TBC1D4-201ENST00000377625 THSD7AQ9UPZ6 1657 aa16.03■□□□□ 0.16
TBC1D4-201ENST00000377625 CD8AP01732 235 aa16.03■□□□□ 0.16
TBC1D4-201ENST00000377625 NRN1LQ496H8 165 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms