RNA–Protein interactions for RNA: ENST00000377342.9

CBWD3-202, Transcript of COBW domain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CBWD3, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-202ENST00000377342 COA4Q9NYJ1 87 aa16.84■□□□□ 0.29
CBWD3-202ENST00000377342 FBXO7Q9Y3I1 522 aa16.84■□□□□ 0.29
CBWD3-202ENST00000377342 A0A1B0GU03 582 aa16.83■□□□□ 0.28
CBWD3-202ENST00000377342 CGB1A6NKQ9 187 aa16.83■□□□□ 0.28
CBWD3-202ENST00000377342 LINC01548A6NM66 108 aa16.83■□□□□ 0.28
CBWD3-202ENST00000377342 E7EUB6 86 aa16.83■□□□□ 0.28
CBWD3-202ENST00000377342 SNAPC5O75971 98 aa16.83■□□□□ 0.28
CBWD3-202ENST00000377342 SIX6O95475 246 aa16.83■□□□□ 0.28
CBWD3-202ENST00000377342 CXCL3P19876 107 aa16.83■□□□□ 0.28
CBWD3-202ENST00000377342 COMPP49747 757 aaPredicted RBP16.83■□□□□ 0.28
CBWD3-202ENST00000377342 H2BFSP57053 126 aa16.83■□□□□ 0.28
CBWD3-202ENST00000377342 RRAS2P62070 204 aaPredicted RBP16.83■□□□□ 0.28
CBWD3-202ENST00000377342 ZNF429Q86V71 674 aa16.83■□□□□ 0.28
CBWD3-202ENST00000377342 OR4A16Q8NH70 328 aa16.83■□□□□ 0.28
CBWD3-202ENST00000377342 MED28Q9H204 178 aa16.83■□□□□ 0.28
CBWD3-202ENST00000377342 MGAT4CQ9UBM8 478 aa16.83■□□□□ 0.28
CBWD3-202ENST00000377342 PRNDQ9UKY0 176 aa16.83■□□□□ 0.28
CBWD3-202ENST00000377342 TRIM77I1YAP6 450 aa16.82■□□□□ 0.28
CBWD3-202ENST00000377342 ST8SIA3O43173 380 aa16.82■□□□□ 0.28
CBWD3-202ENST00000377342 IGHG2P01859 326 aa16.82■□□□□ 0.28
CBWD3-202ENST00000377342 RPL15P61313 204 aaKnown RBP16.82■□□□□ 0.28
CBWD3-202ENST00000377342 ZNF562Q6V9R5 426 aa16.82■□□□□ 0.28
CBWD3-202ENST00000377342 FAM25EA8MYX2 175 aa16.81■□□□□ 0.28
CBWD3-202ENST00000377342 NXPH3O95157 252 aa16.81■□□□□ 0.28
CBWD3-202ENST00000377342 OPN1MWP04001 364 aa16.81■□□□□ 0.28
CBWD3-202ENST00000377342 OPN1MW2P0DN77 364 aa16.81■□□□□ 0.28
CBWD3-202ENST00000377342 OPN1MW3P0DN78 364 aa16.81■□□□□ 0.28
CBWD3-202ENST00000377342 MAS1LP35410 378 aa16.81■□□□□ 0.28
CBWD3-202ENST00000377342 IAH1Q2TAA2 248 aaPredicted RBP16.81■□□□□ 0.28
CBWD3-202ENST00000377342 TMEM95Q3KNT9 176 aa16.81■□□□□ 0.28
CBWD3-202ENST00000377342 SRSF12Q8WXF0 261 aaKnown RBP16.81■□□□□ 0.28
CBWD3-202ENST00000377342 SPIN2AQ99865 258 aa16.81■□□□□ 0.28
CBWD3-202ENST00000377342 SPIN2BQ9BPZ2 258 aa16.81■□□□□ 0.28
CBWD3-202ENST00000377342 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.81■□□□□ 0.28
CBWD3-202ENST00000377342 OR51B2Q9Y5P1 312 aa16.81■□□□□ 0.28
CBWD3-202ENST00000377342 hCG_2014768A0A024R1R8 64 aa16.81■□□□□ 0.28
CBWD3-202ENST00000377342 C13orf42A0A1B0GVH6 325 aa16.81■□□□□ 0.28
CBWD3-202ENST00000377342 FXYD3Q14802 87 aa16.81■□□□□ 0.28
CBWD3-202ENST00000377342 C9orf152Q5JTZ5 239 aa16.81■□□□□ 0.28
CBWD3-202ENST00000377342 THOC7Q6I9Y2 204 aaKnown RBP16.81■□□□□ 0.28
CBWD3-202ENST00000377342 Q6ZSV7 163 aa16.81■□□□□ 0.28
CBWD3-202ENST00000377342 Q8N2B8 174 aa16.81■□□□□ 0.28
CBWD3-202ENST00000377342 ZBTB8BQ8NAP8 495 aaPredicted RBP16.81■□□□□ 0.28
CBWD3-202ENST00000377342 OR4D5Q8NGN0 318 aa16.81■□□□□ 0.28
CBWD3-202ENST00000377342 ARPC1AQ92747 370 aa16.81■□□□□ 0.28
CBWD3-202ENST00000377342 WDR89Q96FK6 387 aaPredicted RBP16.81■□□□□ 0.28
CBWD3-202ENST00000377342 FAM103A1Q9BTL3 118 aaKnown RBP16.81■□□□□ 0.28
CBWD3-202ENST00000377342 TEX50A0A1B0GTY4 177 aa16.8■□□□□ 0.28
CBWD3-202ENST00000377342 C5orf51A6NDU8 294 aa16.8■□□□□ 0.28
CBWD3-202ENST00000377342 ATP6V0E1O15342 81 aa16.8■□□□□ 0.28
CBWD3-202ENST00000377342 RBMXL2O75526 392 aaKnown RBP16.8■□□□□ 0.28
CBWD3-202ENST00000377342 EGR2P11161 476 aaPredicted RBP16.8■□□□□ 0.28
CBWD3-202ENST00000377342 GSG1LQ6UXU4 331 aa16.8■□□□□ 0.28
CBWD3-202ENST00000377342 GRPEL2Q8TAA5 225 aa16.8■□□□□ 0.28
CBWD3-202ENST00000377342 PRSS22Q9GZN4 317 aa16.8■□□□□ 0.28
CBWD3-202ENST00000377342 COMMD5Q9GZQ3 224 aa16.8■□□□□ 0.28
CBWD3-202ENST00000377342 ZNF257Q9Y2Q1 563 aa16.8■□□□□ 0.28
CBWD3-202ENST00000377342 ATRQ13535 2644 aa16.8■□□□□ 0.28
CBWD3-202ENST00000377342 RPL27AP46776 148 aaKnown RBP16.79■□□□□ 0.28
CBWD3-202ENST00000377342 SLC35E3Q7Z769 313 aa16.79■□□□□ 0.28
CBWD3-202ENST00000377342 OR5B3Q8NH48 314 aa16.79■□□□□ 0.28
CBWD3-202ENST00000377342 OR1S1Q8NH92 325 aa16.79■□□□□ 0.28
CBWD3-202ENST00000377342 PARP11Q9NR21 331 aa16.79■□□□□ 0.28
CBWD3-202ENST00000377342 TEX22C9J3V5 150 aa16.78■□□□□ 0.28
CBWD3-202ENST00000377342 ACTL6BO94805 426 aa16.78■□□□□ 0.28
CBWD3-202ENST00000377342 CNIH1O95406 144 aa16.78■□□□□ 0.28
CBWD3-202ENST00000377342 IL15RAQ13261 267 aa16.78■□□□□ 0.28
CBWD3-202ENST00000377342 PDLIM3Q53GG5 364 aaPredicted RBP16.78■□□□□ 0.28
CBWD3-202ENST00000377342 SPINK9Q5DT21 86 aa16.78■□□□□ 0.28
CBWD3-202ENST00000377342 CXorf66Q5JRM2 361 aaPredicted RBP16.78■□□□□ 0.28
CBWD3-202ENST00000377342 PRIMA1Q86XR5 153 aa16.78■□□□□ 0.28
CBWD3-202ENST00000377342 C2orf50Q96LR7 162 aa16.78■□□□□ 0.28
CBWD3-202ENST00000377342 NDUFA4L2Q9NRX3 87 aa16.78■□□□□ 0.28
CBWD3-202ENST00000377342 FKBP11Q9NYL4 201 aa16.78■□□□□ 0.28
CBWD3-202ENST00000377342 HSPB7Q9UBY9 170 aa16.78■□□□□ 0.28
CBWD3-202ENST00000377342 TSPAN9O75954 239 aa16.78■□□□□ 0.28
CBWD3-202ENST00000377342 HSPE1P61604 102 aaKnown RBP16.78■□□□□ 0.28
CBWD3-202ENST00000377342 PRCDQ00LT1 54 aa16.78■□□□□ 0.28
CBWD3-202ENST00000377342 ASPHD1Q5U4P2 390 aa16.78■□□□□ 0.28
CBWD3-202ENST00000377342 C11orf87Q6NUJ2 197 aa16.78■□□□□ 0.28
CBWD3-202ENST00000377342 LURAP1LQ8IV03 231 aa16.78■□□□□ 0.28
CBWD3-202ENST00000377342 OR1L8Q8NGR8 309 aa16.78■□□□□ 0.28
CBWD3-202ENST00000377342 KCNAB3O43448 404 aa16.77■□□□□ 0.28
CBWD3-202ENST00000377342 TNFRSF9Q07011 255 aa16.77■□□□□ 0.28
CBWD3-202ENST00000377342 C19orf54Q5BKX5 351 aa16.77■□□□□ 0.28
CBWD3-202ENST00000377342 OR10W1Q8NGF6 305 aa16.77■□□□□ 0.28
CBWD3-202ENST00000377342 OR52E5Q8NH55 327 aa16.77■□□□□ 0.28
CBWD3-202ENST00000377342 GSKIPQ9P0R6 139 aa16.77■□□□□ 0.28
CBWD3-202ENST00000377342 IGLC7A0M8Q6 106 aa16.76■□□□□ 0.27
CBWD3-202ENST00000377342 IGF1P05019 195 aa16.76■□□□□ 0.27
CBWD3-202ENST00000377342 APELAP0DMC3 54 aa16.76■□□□□ 0.27
CBWD3-202ENST00000377342 CRIP2P52943 208 aaPredicted RBP16.76■□□□□ 0.27
CBWD3-202ENST00000377342 SRSF4Q08170 494 aaKnown RBP16.76■□□□□ 0.27
CBWD3-202ENST00000377342 SGMS2Q8NHU3 365 aa16.76■□□□□ 0.27
CBWD3-202ENST00000377342 ABHD5Q8WTS1 349 aa16.76■□□□□ 0.27
CBWD3-202ENST00000377342 CHAC2Q8WUX2 184 aa16.76■□□□□ 0.27
CBWD3-202ENST00000377342 FYTTD1Q96QD9 318 aaKnown RBP16.76■□□□□ 0.27
CBWD3-202ENST00000377342 SERTAD4Q9NUC0 356 aa16.76■□□□□ 0.27
CBWD3-202ENST00000377342 LINC00527Q9UJ94 153 aa16.76■□□□□ 0.27
CBWD3-202ENST00000377342 HMX3A6NHT5 357 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms