RNA–Protein interactions for RNA: ENST00000376237.8

HLA-C-202, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,538 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-202ENST00000376237 ZNF562Q6V9R5 426 aa18.22■□□□□ 0.51
HLA-C-202ENST00000376237 CLCC1Q96S66 551 aa18.22■□□□□ 0.51
HLA-C-202ENST00000376237 CHIAQ9BZP6 476 aa18.22■□□□□ 0.51
HLA-C-202ENST00000376237 TNFRSF19Q9NS68 423 aa18.22■□□□□ 0.51
HLA-C-202ENST00000376237 OR51B2Q9Y5P1 312 aa18.22■□□□□ 0.51
HLA-C-202ENST00000376237 DNAJC9-AS1A6NH13 148 aa18.21■□□□□ 0.51
HLA-C-202ENST00000376237 CHST1O43916 411 aa18.21■□□□□ 0.51
HLA-C-202ENST00000376237 OR2B8PP59922 312 aa18.21■□□□□ 0.51
HLA-C-202ENST00000376237 HSPE1P61604 102 aaKnown RBP18.21■□□□□ 0.51
HLA-C-202ENST00000376237 PJVKQ0ZLH3 352 aa18.21■□□□□ 0.51
HLA-C-202ENST00000376237 IL15RAQ13261 267 aa18.21■□□□□ 0.51
HLA-C-202ENST00000376237 FYTTD1Q96QD9 318 aaKnown RBP18.21■□□□□ 0.51
HLA-C-202ENST00000376237 ZFP57Q9NU63 452 aa18.21■□□□□ 0.51
HLA-C-202ENST00000376237 FCN1O00602 326 aa18.2■□□□□ 0.5
HLA-C-202ENST00000376237 ST8SIA3O43173 380 aa18.2■□□□□ 0.5
HLA-C-202ENST00000376237 CA2P00918 260 aa18.2■□□□□ 0.5
HLA-C-202ENST00000376237 NKX2-1P43699 371 aaPredicted RBP18.2■□□□□ 0.5
HLA-C-202ENST00000376237 RAP2BP61225 183 aa18.2■□□□□ 0.5
HLA-C-202ENST00000376237 ID3Q02535 119 aa18.2■□□□□ 0.5
HLA-C-202ENST00000376237 TNXAQ16473 311 aa18.2■□□□□ 0.5
HLA-C-202ENST00000376237 PDLIM3Q53GG5 364 aaPredicted RBP18.2■□□□□ 0.5
HLA-C-202ENST00000376237 LURAP1LQ8IV03 231 aa18.2■□□□□ 0.5
HLA-C-202ENST00000376237 QTRT1Q9BXR0 403 aaKnown RBP18.2■□□□□ 0.5
HLA-C-202ENST00000376237 HSPB7Q9UBY9 170 aa18.2■□□□□ 0.5
HLA-C-202ENST00000376237 IFNA17P01571 189 aa18.19■□□□□ 0.5
HLA-C-202ENST00000376237 AMY1AP04745 511 aa18.19■□□□□ 0.5
HLA-C-202ENST00000376237 COMPP49747 757 aaPredicted RBP18.19■□□□□ 0.5
HLA-C-202ENST00000376237 SPCS3P61009 180 aa18.19■□□□□ 0.5
HLA-C-202ENST00000376237 TNFRSF9Q07011 255 aa18.19■□□□□ 0.5
HLA-C-202ENST00000376237 OR1L8Q8NGR8 309 aa18.19■□□□□ 0.5
HLA-C-202ENST00000376237 MTORP42345 2549 aa18.19■□□□□ 0.5
HLA-C-202ENST00000376237 TEX50A0A1B0GTY4 177 aa18.18■□□□□ 0.5
HLA-C-202ENST00000376237 CNIH1O95406 144 aa18.18■□□□□ 0.5
HLA-C-202ENST00000376237 CX3CL1P78423 397 aa18.18■□□□□ 0.5
HLA-C-202ENST00000376237 CD83Q01151 205 aa18.18■□□□□ 0.5
HLA-C-202ENST00000376237 CXorf66Q5JRM2 361 aaPredicted RBP18.18■□□□□ 0.5
HLA-C-202ENST00000376237 NSD1Q96L73 2696 aaPredicted RBP18.18■□□□□ 0.5
HLA-C-202ENST00000376237 GPR137BO60478 399 aa18.18■□□□□ 0.5
HLA-C-202ENST00000376237 MED6O75586 246 aa18.18■□□□□ 0.5
HLA-C-202ENST00000376237 CCNKO75909 580 aa18.18■□□□□ 0.5
HLA-C-202ENST00000376237 RPL15P61313 204 aaKnown RBP18.18■□□□□ 0.5
HLA-C-202ENST00000376237 GNB1P62873 340 aa18.18■□□□□ 0.5
HLA-C-202ENST00000376237 AKAP14Q86UN6 197 aa18.18■□□□□ 0.5
HLA-C-202ENST00000376237 NPFFR1Q9GZQ6 430 aa18.18■□□□□ 0.5
HLA-C-202ENST00000376237 ESM1Q9NQ30 184 aa18.18■□□□□ 0.5
HLA-C-202ENST00000376237 IGHV7-81A0A0B4J1V7 117 aa18.17■□□□□ 0.5
HLA-C-202ENST00000376237 RPL27AP46776 148 aaKnown RBP18.17■□□□□ 0.5
HLA-C-202ENST00000376237 FXYD3Q14802 87 aa18.17■□□□□ 0.5
HLA-C-202ENST00000376237 PPP1R1CQ8WVI7 109 aa18.17■□□□□ 0.5
HLA-C-202ENST00000376237 DUX5Q96PT3 197 aa18.17■□□□□ 0.5
HLA-C-202ENST00000376237 NDUFA4L2Q9NRX3 87 aa18.17■□□□□ 0.5
HLA-C-202ENST00000376237 SCGB1D2O95969 90 aa18.16■□□□□ 0.5
HLA-C-202ENST00000376237 MBPP02686 304 aaPredicted RBP18.16■□□□□ 0.5
HLA-C-202ENST00000376237 RNASE1P07998 156 aaKnown RBP18.16■□□□□ 0.5
HLA-C-202ENST00000376237 PRCDQ00LT1 54 aa18.16■□□□□ 0.5
HLA-C-202ENST00000376237 FGL1Q08830 312 aa18.16■□□□□ 0.5
HLA-C-202ENST00000376237 SRSF12Q8WXF0 261 aaKnown RBP18.16■□□□□ 0.5
HLA-C-202ENST00000376237 ANK3Q12955 4377 aaKnown RBP18.15■□□□□ 0.5
HLA-C-202ENST00000376237 TRIM77I1YAP6 450 aa18.15■□□□□ 0.5
HLA-C-202ENST00000376237 WRBO00258 174 aa18.15■□□□□ 0.5
HLA-C-202ENST00000376237 KCNAB3O43448 404 aa18.15■□□□□ 0.5
HLA-C-202ENST00000376237 TCF21O43680 179 aa18.15■□□□□ 0.5
HLA-C-202ENST00000376237 LY86O95711 162 aa18.15■□□□□ 0.5
HLA-C-202ENST00000376237 RLN2P04090 185 aa18.15■□□□□ 0.5
HLA-C-202ENST00000376237 PSMB6P28072 239 aa18.15■□□□□ 0.5
HLA-C-202ENST00000376237 SSBP2P81877 361 aaPredicted RBP18.15■□□□□ 0.5
HLA-C-202ENST00000376237 RAB32Q13637 225 aa18.15■□□□□ 0.5
HLA-C-202ENST00000376237 MRPL41Q8IXM3 137 aaKnown RBP18.15■□□□□ 0.5
HLA-C-202ENST00000376237 ARPC1AQ92747 370 aa18.15■□□□□ 0.5
HLA-C-202ENST00000376237 SRSF8Q9BRL6 282 aaKnown RBP18.15■□□□□ 0.5
HLA-C-202ENST00000376237 RANGRFQ9HD47 186 aaPredicted RBP18.15■□□□□ 0.5
HLA-C-202ENST00000376237 FN1P02751 2386 aaKnown RBP18.15■□□□□ 0.5
HLA-C-202ENST00000376237 A0A1W2PN81 502 aa18.14■□□□□ 0.49
HLA-C-202ENST00000376237 SYNGR2O43760 224 aa18.14■□□□□ 0.49
HLA-C-202ENST00000376237 NXPH3O95157 252 aa18.14■□□□□ 0.49
HLA-C-202ENST00000376237 IGHG2P01859 326 aa18.14■□□□□ 0.49
HLA-C-202ENST00000376237 OPN1MWP04001 364 aa18.14■□□□□ 0.49
HLA-C-202ENST00000376237 PET100P0DJ07 73 aa18.14■□□□□ 0.49
HLA-C-202ENST00000376237 OPN1MW2P0DN77 364 aa18.14■□□□□ 0.49
HLA-C-202ENST00000376237 OPN1MW3P0DN78 364 aa18.14■□□□□ 0.49
HLA-C-202ENST00000376237 MYOD1P15172 320 aa18.14■□□□□ 0.49
HLA-C-202ENST00000376237 CHRNA7P36544 502 aa18.14■□□□□ 0.49
HLA-C-202ENST00000376237 BLCAPP62952 87 aa18.14■□□□□ 0.49
HLA-C-202ENST00000376237 C10orf55Q5SWW7 151 aa18.14■□□□□ 0.49
HLA-C-202ENST00000376237 HSD17B13Q7Z5P4 300 aaPredicted RBP18.14■□□□□ 0.49
HLA-C-202ENST00000376237 WDR89Q96FK6 387 aaPredicted RBP18.14■□□□□ 0.49
HLA-C-202ENST00000376237 ST6GAL2Q96JF0 529 aa18.14■□□□□ 0.49
HLA-C-202ENST00000376237 HSPB9Q9BQS6 159 aa18.14■□□□□ 0.49
HLA-C-202ENST00000376237 PRSS22Q9GZN4 317 aa18.14■□□□□ 0.49
HLA-C-202ENST00000376237 CEBPZOSA8MTT3 80 aa18.13■□□□□ 0.49
HLA-C-202ENST00000376237 UBA52P62987 128 aaKnown RBP18.13■□□□□ 0.49
HLA-C-202ENST00000376237 OR2T35Q8NGX2 323 aa18.13■□□□□ 0.49
HLA-C-202ENST00000376237 CIB3Q96Q77 187 aaPredicted RBP18.13■□□□□ 0.49
HLA-C-202ENST00000376237 HINT2Q9BX68 163 aa18.13■□□□□ 0.49
HLA-C-202ENST00000376237 RBKSQ9H477 322 aa18.13■□□□□ 0.49
HLA-C-202ENST00000376237 PLEKHA3Q9HB20 300 aa18.13■□□□□ 0.49
HLA-C-202ENST00000376237 ENY2Q9NPA8 101 aa18.13■□□□□ 0.49
HLA-C-202ENST00000376237 MSGN1A6NI15 193 aa18.13■□□□□ 0.49
HLA-C-202ENST00000376237 E7EUB6 86 aa18.13■□□□□ 0.49
HLA-C-202ENST00000376237 INS-IGF2F8WCM5 200 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms