RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 CT45A3Q8NHU0 189 aa11.99□□□□□ -0.49
MSH5-201ENST00000375703 C15orf61A6NNL5 157 aa11.99□□□□□ -0.49
MSH5-201ENST00000375703 CGB3P0DN86 165 aa11.99□□□□□ -0.49
MSH5-201ENST00000375703 CGB7P0DN87 165 aa11.99□□□□□ -0.49
MSH5-201ENST00000375703 WT1P19544 449 aaPredicted RBP11.99□□□□□ -0.49
MSH5-201ENST00000375703 HNF1AP20823 631 aa11.99□□□□□ -0.49
MSH5-201ENST00000375703 HSPE1P61604 102 aaKnown RBP11.99□□□□□ -0.49
MSH5-201ENST00000375703 C17orf58Q2M2W7 97 aa11.99□□□□□ -0.49
MSH5-201ENST00000375703 FAM201AQ5SY85 155 aa11.99□□□□□ -0.49
MSH5-201ENST00000375703 VHLLQ6RSH7 139 aa11.99□□□□□ -0.49
MSH5-201ENST00000375703 MRPL41Q8IXM3 137 aaKnown RBP11.99□□□□□ -0.49
MSH5-201ENST00000375703 OCC1Q8TAD7 63 aa11.99□□□□□ -0.49
MSH5-201ENST00000375703 SEPSECSQ9HD40 501 aaKnown RBP11.99□□□□□ -0.49
MSH5-201ENST00000375703 ENY2Q9NPA8 101 aa11.99□□□□□ -0.49
MSH5-201ENST00000375703 MKRN2OSH3BPM6 223 aa11.98□□□□□ -0.49
MSH5-201ENST00000375703 LHBP01229 141 aa11.98□□□□□ -0.49
MSH5-201ENST00000375703 NPY1RP25929 384 aa11.98□□□□□ -0.49
MSH5-201ENST00000375703 CCKARP32238 428 aa11.98□□□□□ -0.49
MSH5-201ENST00000375703 RAB31Q13636 194 aa11.98□□□□□ -0.49
MSH5-201ENST00000375703 EFNB3Q15768 340 aa11.98□□□□□ -0.49
MSH5-201ENST00000375703 OR4A47Q6IF82 309 aa11.98□□□□□ -0.49
MSH5-201ENST00000375703 ITLN1Q8WWA0 313 aa11.98□□□□□ -0.49
MSH5-201ENST00000375703 ELOVL5Q9NYP7 299 aa11.98□□□□□ -0.49
MSH5-201ENST00000375703 YTHDF2Q9Y5A9 579 aaKnown RBP11.98□□□□□ -0.49
MSH5-201ENST00000375703 HEATR1Q9H583 2144 aaKnown RBP11.98□□□□□ -0.49
MSH5-201ENST00000375703 HCFC1P51610 2035 aa11.98□□□□□ -0.49
MSH5-201ENST00000375703 ITGB1BP1O14713 200 aa11.98□□□□□ -0.49
MSH5-201ENST00000375703 PAX1P15863 534 aa11.98□□□□□ -0.49
MSH5-201ENST00000375703 GCHFRP30047 84 aa11.98□□□□□ -0.49
MSH5-201ENST00000375703 KLF3P57682 345 aaPredicted RBP11.98□□□□□ -0.49
MSH5-201ENST00000375703 RHOBP62745 196 aa11.98□□□□□ -0.49
MSH5-201ENST00000375703 RELQ04864 619 aaPredicted RBP11.98□□□□□ -0.49
MSH5-201ENST00000375703 SLC24A4Q8NFF2 622 aa11.98□□□□□ -0.49
MSH5-201ENST00000375703 SAA2-SAA4A0A096LPE2 208 aa11.97□□□□□ -0.49
MSH5-201ENST00000375703 SAA2P0DJI9 122 aaPredicted RBP11.97□□□□□ -0.49
MSH5-201ENST00000375703 SFTPCP11686 197 aa11.97□□□□□ -0.49
MSH5-201ENST00000375703 SPATA31B1PQ5VZV4 182 aa11.97□□□□□ -0.49
MSH5-201ENST00000375703 SEM1Q6ZVN7 128 aa11.97□□□□□ -0.49
MSH5-201ENST00000375703 GBGT1Q8N5D6 347 aa11.97□□□□□ -0.49
MSH5-201ENST00000375703 STPG3Q8N7X2 389 aa11.97□□□□□ -0.49
MSH5-201ENST00000375703 OR10G8Q8NGN5 311 aa11.97□□□□□ -0.49
MSH5-201ENST00000375703 RAB9BQ9NP90 201 aa11.97□□□□□ -0.49
MSH5-201ENST00000375703 FOXA2Q9Y261 457 aaPredicted RBP11.97□□□□□ -0.49
MSH5-201ENST00000375703 KBTBD11-OT1A0A1B0GTJ5 212 aa11.97□□□□□ -0.49
MSH5-201ENST00000375703 A8MWP6 167 aa11.97□□□□□ -0.49
MSH5-201ENST00000375703 FOXH1O75593 365 aa11.97□□□□□ -0.49
MSH5-201ENST00000375703 CA2P00918 260 aa11.97□□□□□ -0.49
MSH5-201ENST00000375703 NDUFB7P17568 137 aa11.97□□□□□ -0.49
MSH5-201ENST00000375703 THBS3P49746 956 aa11.97□□□□□ -0.49
MSH5-201ENST00000375703 MRPS11P82912 194 aaKnown RBP11.97□□□□□ -0.49
MSH5-201ENST00000375703 LYG1Q8N1E2 194 aa11.97□□□□□ -0.49
MSH5-201ENST00000375703 NOL4LQ96MY1 436 aaPredicted RBP11.97□□□□□ -0.49
MSH5-201ENST00000375703 HINT2Q9BX68 163 aa11.97□□□□□ -0.49
MSH5-201ENST00000375703 TMEM14BQ9NUH8 114 aa11.97□□□□□ -0.49
MSH5-201ENST00000375703 LOC400499M0QZD8 3231 aa11.96□□□□□ -0.49
MSH5-201ENST00000375703 MT-CO2P00403 227 aa11.96□□□□□ -0.49
MSH5-201ENST00000375703 TIMP3P35625 211 aa11.96□□□□□ -0.49
MSH5-201ENST00000375703 GLRXP35754 106 aa11.96□□□□□ -0.49
MSH5-201ENST00000375703 RPL31P62899 125 aaKnown RBP11.96□□□□□ -0.49
MSH5-201ENST00000375703 DEFB109BQ30KR1 87 aa11.96□□□□□ -0.49
MSH5-201ENST00000375703 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.96□□□□□ -0.49
MSH5-201ENST00000375703 RPL29P47914 159 aaKnown RBP11.96□□□□□ -0.49
MSH5-201ENST00000375703 TEX38Q6PEX7 206 aa11.96□□□□□ -0.49
MSH5-201ENST00000375703 OR4P4Q8NGL7 312 aa11.96□□□□□ -0.49
MSH5-201ENST00000375703 TMEM68Q96MH6 324 aa11.96□□□□□ -0.49
MSH5-201ENST00000375703 WFIKKN1Q96NZ8 548 aa11.96□□□□□ -0.49
MSH5-201ENST00000375703 NCOR1P1Q9H4R4 102 aa11.96□□□□□ -0.49
MSH5-201ENST00000375703 TRGV10A0A0A0MS01 117 aa11.95□□□□□ -0.5
MSH5-201ENST00000375703 MBD3L4A6NDZ8 208 aaPredicted RBP11.95□□□□□ -0.5
MSH5-201ENST00000375703 MBD3L3A6NE82 208 aaPredicted RBP11.95□□□□□ -0.5
MSH5-201ENST00000375703 MBD3L5A6NJ08 208 aaPredicted RBP11.95□□□□□ -0.5
MSH5-201ENST00000375703 TIMM23BQ5SRD1 257 aa11.95□□□□□ -0.5
MSH5-201ENST00000375703 TCF23Q7RTU1 214 aa11.95□□□□□ -0.5
MSH5-201ENST00000375703 MBD3L2Q8NHZ7 208 aaPredicted RBP11.95□□□□□ -0.5
MSH5-201ENST00000375703 MYOD1P15172 320 aa11.95□□□□□ -0.5
MSH5-201ENST00000375703 TMEM256Q8N2U0 113 aa11.95□□□□□ -0.5
MSH5-201ENST00000375703 CHODLQ9H9P2 273 aa11.95□□□□□ -0.5
MSH5-201ENST00000375703 ASCL3Q9NQ33 180 aa11.95□□□□□ -0.5
MSH5-201ENST00000375703 IDI2-AS1Q9NZ38 188 aa11.95□□□□□ -0.5
MSH5-201ENST00000375703 OR51B2Q9Y5P1 312 aa11.95□□□□□ -0.5
MSH5-201ENST00000375703 IGFBP2P18065 325 aa11.95□□□□□ -0.5
MSH5-201ENST00000375703 COL8A2P25067 703 aa11.95□□□□□ -0.5
MSH5-201ENST00000375703 DUX4L9Q6RFH8 374 aaPredicted RBP11.95□□□□□ -0.5
MSH5-201ENST00000375703 ZNF474Q6S9Z5 364 aaPredicted RBP11.95□□□□□ -0.5
MSH5-201ENST00000375703 DEFB108BQ8NET1 73 aa11.95□□□□□ -0.5
MSH5-201ENST00000375703 ADTRPQ96IZ2 230 aa11.95□□□□□ -0.5
MSH5-201ENST00000375703 UHRF2Q96PU4 802 aa11.95□□□□□ -0.5
MSH5-201ENST00000375703 RNF7Q9UBF6 113 aa11.95□□□□□ -0.5
MSH5-201ENST00000375703 NBEAQ8NFP9 2946 aa11.94□□□□□ -0.5
MSH5-201ENST00000375703 TET2Q6N021 2002 aaPredicted RBP11.94□□□□□ -0.5
MSH5-201ENST00000375703 YPEL3P61236 119 aaPredicted RBP11.94□□□□□ -0.5
MSH5-201ENST00000375703 ZNF90Q03938 601 aa11.94□□□□□ -0.5
MSH5-201ENST00000375703 SSX2Q16385 188 aa11.94□□□□□ -0.5
MSH5-201ENST00000375703 IQCJQ1A5X6 159 aa11.94□□□□□ -0.5
MSH5-201ENST00000375703 DEFB124Q8NES8 71 aa11.94□□□□□ -0.5
MSH5-201ENST00000375703 CORO2AQ92828 525 aa11.94□□□□□ -0.5
MSH5-201ENST00000375703 TP53TG5Q9Y2B4 290 aa11.94□□□□□ -0.5
MSH5-201ENST00000375703 INTS1Q8N201 2190 aaKnown RBP11.94□□□□□ -0.5
MSH5-201ENST00000375703 A0A1B0GUS0 222 aa11.94□□□□□ -0.5
MSH5-201ENST00000375703 SPAARA0A1B0GVQ0 90 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms