RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 FAM222BQ8WU58 562 aa6.83□□□□□ -1.32
UBR4-202ENST00000375224 COL25A1Q9BXS0 654 aaPredicted RBP6.83□□□□□ -1.32
UBR4-202ENST00000375224 NGBQ9NPG2 151 aa6.83□□□□□ -1.32
UBR4-202ENST00000375224 SLC35D1Q9NTN3 355 aa6.83□□□□□ -1.32
UBR4-202ENST00000375224 MSRB2Q9Y3D2 182 aa6.83□□□□□ -1.32
UBR4-202ENST00000375224 PPIAL4AQ9Y536 164 aa6.83□□□□□ -1.32
UBR4-202ENST00000375224 KIAA1324LA8MWY0 1029 aaPredicted RBP6.83□□□□□ -1.32
UBR4-202ENST00000375224 YPEL1O60688 119 aa6.83□□□□□ -1.32
UBR4-202ENST00000375224 PPP1CCP36873 323 aaKnown RBP6.83□□□□□ -1.32
UBR4-202ENST00000375224 UCNP55089 124 aa6.83□□□□□ -1.32
UBR4-202ENST00000375224 HBG1P69891 147 aa6.83□□□□□ -1.32
UBR4-202ENST00000375224 HBG2P69892 147 aa6.83□□□□□ -1.32
UBR4-202ENST00000375224 EIF4EBP1Q13541 118 aaPredicted RBP6.83□□□□□ -1.32
UBR4-202ENST00000375224 RAB31Q13636 194 aa6.83□□□□□ -1.32
UBR4-202ENST00000375224 CST9LP1Q5W188 147 aa6.83□□□□□ -1.32
UBR4-202ENST00000375224 OR4A47Q6IF82 309 aa6.83□□□□□ -1.32
UBR4-202ENST00000375224 STPG4Q8N801 248 aa6.83□□□□□ -1.32
UBR4-202ENST00000375224 ZNF709Q8N972 641 aa6.83□□□□□ -1.32
UBR4-202ENST00000375224 Q8TCH9 128 aa6.83□□□□□ -1.32
UBR4-202ENST00000375224 YPEL2Q96QA6 119 aa6.83□□□□□ -1.32
UBR4-202ENST00000375224 RBKSQ9H477 322 aa6.83□□□□□ -1.32
UBR4-202ENST00000375224 AURKAIP1Q9NWT8 199 aaPredicted RBP6.83□□□□□ -1.32
UBR4-202ENST00000375224 ZNF586Q9NXT0 402 aa6.83□□□□□ -1.32
UBR4-202ENST00000375224 PSENENQ9NZ42 101 aa6.83□□□□□ -1.32
UBR4-202ENST00000375224 PLA2G2EQ9NZK7 142 aa6.83□□□□□ -1.32
UBR4-202ENST00000375224 LAMTOR2Q9Y2Q5 125 aa6.83□□□□□ -1.32
UBR4-202ENST00000375224 CST7O76096 145 aa6.82□□□□□ -1.32
UBR4-202ENST00000375224 TOMM40O96008 361 aa6.82□□□□□ -1.32
UBR4-202ENST00000375224 ATP6V0CP27449 155 aa6.82□□□□□ -1.32
UBR4-202ENST00000375224 SSTR5P35346 364 aa6.82□□□□□ -1.32
UBR4-202ENST00000375224 UNQ5815/PRO19632Q6UWF5 114 aa6.82□□□□□ -1.32
UBR4-202ENST00000375224 DPPA3Q6W0C5 159 aa6.82□□□□□ -1.32
UBR4-202ENST00000375224 OR4X1Q8NH49 305 aa6.82□□□□□ -1.32
UBR4-202ENST00000375224 YPEL4Q96NS1 127 aa6.82□□□□□ -1.32
UBR4-202ENST00000375224 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.82□□□□□ -1.32
UBR4-202ENST00000375224 JKAMPQ9P055 326 aa6.82□□□□□ -1.32
UBR4-202ENST00000375224 GNG12Q9UBI6 72 aa6.82□□□□□ -1.32
UBR4-202ENST00000375224 RAB29O14966 203 aa6.82□□□□□ -1.32
UBR4-202ENST00000375224 CLDN14O95500 239 aa6.82□□□□□ -1.32
UBR4-202ENST00000375224 TMEM50AO95807 157 aa6.82□□□□□ -1.32
UBR4-202ENST00000375224 STAG3L2P0CL84 134 aa6.82□□□□□ -1.32
UBR4-202ENST00000375224 TNFRSF1AP19438 455 aa6.82□□□□□ -1.32
UBR4-202ENST00000375224 TMPRSS3P57727 454 aa6.82□□□□□ -1.32
UBR4-202ENST00000375224 TMEM30BQ3MIR4 351 aa6.82□□□□□ -1.32
UBR4-202ENST00000375224 TMEM182Q6ZP80 229 aaPredicted RBP6.82□□□□□ -1.32
UBR4-202ENST00000375224 Q6ZRM9 215 aa6.82□□□□□ -1.32
UBR4-202ENST00000375224 ZNF808Q8N4W9 903 aaPredicted RBP6.82□□□□□ -1.32
UBR4-202ENST00000375224 SCGB1C1Q8TD33 95 aa6.82□□□□□ -1.32
UBR4-202ENST00000375224 TMEM37Q8WXS4 190 aa6.82□□□□□ -1.32
UBR4-202ENST00000375224 ZCCHC14Q8WYQ9 949 aaKnown RBP6.82□□□□□ -1.32
UBR4-202ENST00000375224 ATP6V0BQ99437 205 aa6.82□□□□□ -1.32
UBR4-202ENST00000375224 FAM234AQ9H0X4 552 aa6.82□□□□□ -1.32
UBR4-202ENST00000375224 SMDT1Q9H4I9 107 aa6.82□□□□□ -1.32
UBR4-202ENST00000375224 CORTO00230 105 aa6.82□□□□□ -1.32
UBR4-202ENST00000375224 F2RL2O00254 374 aa6.82□□□□□ -1.32
UBR4-202ENST00000375224 NXPH3O95157 252 aa6.82□□□□□ -1.32
UBR4-202ENST00000375224 IGHV1-46P01743 117 aa6.82□□□□□ -1.32
UBR4-202ENST00000375224 GPR12P47775 334 aa6.82□□□□□ -1.32
UBR4-202ENST00000375224 CRYBA4P53673 196 aa6.82□□□□□ -1.32
UBR4-202ENST00000375224 RAB11AP62491 216 aa6.82□□□□□ -1.32
UBR4-202ENST00000375224 TMEM144Q7Z5S9 345 aa6.82□□□□□ -1.32
UBR4-202ENST00000375224 TMEM217Q8N7C4 229 aa6.82□□□□□ -1.32
UBR4-202ENST00000375224 TPRX1Q8N7U7 411 aa6.82□□□□□ -1.32
UBR4-202ENST00000375224 RFESDQ8TAC1 157 aa6.82□□□□□ -1.32
UBR4-202ENST00000375224 CLN8Q9UBY8 286 aa6.82□□□□□ -1.32
UBR4-202ENST00000375224 PSG11Q9UQ72 335 aa6.82□□□□□ -1.32
UBR4-202ENST00000375224 CELSR3Q9NYQ7 3312 aa6.82□□□□□ -1.32
UBR4-202ENST00000375224 IGHV3OR15-7A0A075B7D8 119 aa6.81□□□□□ -1.32
UBR4-202ENST00000375224 LRRC30A6NM36 301 aa6.81□□□□□ -1.32
UBR4-202ENST00000375224 HINT1P49773 126 aaPredicted RBP6.81□□□□□ -1.32
UBR4-202ENST00000375224 MORN2Q502X0 79 aa6.81□□□□□ -1.32
UBR4-202ENST00000375224 FAM213BQ8TBF2 198 aa6.81□□□□□ -1.32
UBR4-202ENST00000375224 DPF1Q92782 380 aa6.81□□□□□ -1.32
UBR4-202ENST00000375224 ZNF479Q96JC4 524 aa6.81□□□□□ -1.32
UBR4-202ENST00000375224 SH3BGRL3Q9H299 93 aa6.81□□□□□ -1.32
UBR4-202ENST00000375224 ZNF665Q9H7R5 613 aa6.81□□□□□ -1.32
UBR4-202ENST00000375224 GCM1Q9NP62 436 aa6.81□□□□□ -1.32
UBR4-202ENST00000375224 TRAV34A0A0B4J273 112 aa6.81□□□□□ -1.32
UBR4-202ENST00000375224 A0A1B0GW64 132 aa6.81□□□□□ -1.32
UBR4-202ENST00000375224 B4DEV8 164 aa6.81□□□□□ -1.32
UBR4-202ENST00000375224 TFF1P04155 84 aa6.81□□□□□ -1.32
UBR4-202ENST00000375224 PF4V1P10720 104 aa6.81□□□□□ -1.32
UBR4-202ENST00000375224 KIR2DS2P43631 304 aa6.81□□□□□ -1.32
UBR4-202ENST00000375224 ASCL1P50553 236 aa6.81□□□□□ -1.32
UBR4-202ENST00000375224 EDDM3BP56851 147 aa6.81□□□□□ -1.32
UBR4-202ENST00000375224 RPL30P62888 115 aaKnown RBP6.81□□□□□ -1.32
UBR4-202ENST00000375224 SUMO1P63165 101 aaKnown RBP6.81□□□□□ -1.32
UBR4-202ENST00000375224 H2BFWTQ7Z2G1 175 aa6.81□□□□□ -1.32
UBR4-202ENST00000375224 ODF3L1Q8IXM7 274 aa6.81□□□□□ -1.32
UBR4-202ENST00000375224 RND1Q92730 232 aa6.81□□□□□ -1.32
UBR4-202ENST00000375224 SNRNP40Q96DI7 357 aaKnown RBP6.81□□□□□ -1.32
UBR4-202ENST00000375224 UQCR10Q9UDW1 63 aa6.81□□□□□ -1.32
UBR4-202ENST00000375224 CACNA1DQ01668 2161 aa6.81□□□□□ -1.32
UBR4-202ENST00000375224 DMXL1Q9Y485 3027 aa6.81□□□□□ -1.32
UBR4-202ENST00000375224 PTPRZ1P23471 2315 aaPredicted RBP6.81□□□□□ -1.32
UBR4-202ENST00000375224 IGHV3-43A0A0B4J1X8 118 aa6.81□□□□□ -1.32
UBR4-202ENST00000375224 FAM90A9PA6NNJ1 464 aa6.81□□□□□ -1.32
UBR4-202ENST00000375224 NDUFB8O95169 186 aa6.81□□□□□ -1.32
UBR4-202ENST00000375224 KRASP01116 189 aa6.81□□□□□ -1.32
UBR4-202ENST00000375224 HBE1P02100 147 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms