RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 LPAR2Q9HBW0 351 aa9.21□□□□□ -0.94
CCDC40-203ENST00000374877 IL36BQ9NZH7 164 aa9.21□□□□□ -0.94
CCDC40-203ENST00000374877 STAG3L2P0CL84 134 aa9.2□□□□□ -0.94
CCDC40-203ENST00000374877 STAG3L3P0CL85 134 aa9.2□□□□□ -0.94
CCDC40-203ENST00000374877 BRS3P32247 399 aa9.2□□□□□ -0.94
CCDC40-203ENST00000374877 OR5I1Q13606 314 aa9.2□□□□□ -0.94
CCDC40-203ENST00000374877 MGST2Q99735 147 aa9.2□□□□□ -0.94
CCDC40-203ENST00000374877 TFPI2P48307 235 aa9.2□□□□□ -0.94
CCDC40-203ENST00000374877 C21orf62-AS1Q17RA5 79 aa9.2□□□□□ -0.94
CCDC40-203ENST00000374877 OR4A16Q8NH70 328 aa9.2□□□□□ -0.94
CCDC40-203ENST00000374877 SLC25A40Q8TBP6 338 aa9.2□□□□□ -0.94
CCDC40-203ENST00000374877 COQ2Q96H96 371 aa9.2□□□□□ -0.94
CCDC40-203ENST00000374877 GGTLC1Q9BX51 225 aa9.2□□□□□ -0.94
CCDC40-203ENST00000374877 A8MXE2 369 aa9.19□□□□□ -0.94
CCDC40-203ENST00000374877 K7EN84 100 aa9.19□□□□□ -0.94
CCDC40-203ENST00000374877 SMPD2O60906 423 aa9.19□□□□□ -0.94
CCDC40-203ENST00000374877 OPRK1P41145 380 aa9.19□□□□□ -0.94
CCDC40-203ENST00000374877 UCNP55089 124 aa9.19□□□□□ -0.94
CCDC40-203ENST00000374877 PSG7Q13046 419 aa9.19□□□□□ -0.94
CCDC40-203ENST00000374877 ABHD12Q8N2K0 398 aa9.19□□□□□ -0.94
CCDC40-203ENST00000374877 SIGLECL1Q8N7X8 197 aa9.19□□□□□ -0.94
CCDC40-203ENST00000374877 HSD17B10Q99714 261 aaKnown RBP9.19□□□□□ -0.94
CCDC40-203ENST00000374877 GP6Q9HCN6 339 aa9.19□□□□□ -0.94
CCDC40-203ENST00000374877 MAP1BP46821 2468 aaKnown RBP9.19□□□□□ -0.94
CCDC40-203ENST00000374877 IGHV3-13P01766 116 aa9.19□□□□□ -0.94
CCDC40-203ENST00000374877 IGHV3-7P01780 117 aa9.19□□□□□ -0.94
CCDC40-203ENST00000374877 IGHG3P01860 377 aa9.19□□□□□ -0.94
CCDC40-203ENST00000374877 HTD2P86397 168 aa9.19□□□□□ -0.94
CCDC40-203ENST00000374877 TMEM249Q2WGJ8 235 aa9.19□□□□□ -0.94
CCDC40-203ENST00000374877 Q6ZR03 302 aa9.19□□□□□ -0.94
CCDC40-203ENST00000374877 OR13A1Q8NGR1 328 aa9.19□□□□□ -0.94
CCDC40-203ENST00000374877 BCL2L2Q92843 193 aaPredicted RBP9.19□□□□□ -0.94
CCDC40-203ENST00000374877 TXNDC17Q9BRA2 123 aa9.19□□□□□ -0.94
CCDC40-203ENST00000374877 DCTN5Q9BTE1 182 aa9.19□□□□□ -0.94
CCDC40-203ENST00000374877 PTPRZ1P23471 2315 aaPredicted RBP9.19□□□□□ -0.94
CCDC40-203ENST00000374877 K7ENP7 123 aa9.19□□□□□ -0.94
CCDC40-203ENST00000374877 MPDU1O75352 247 aa9.19□□□□□ -0.94
CCDC40-203ENST00000374877 RPP30P78346 268 aaKnown RBP9.19□□□□□ -0.94
CCDC40-203ENST00000374877 MRPL49Q13405 166 aaKnown RBP9.19□□□□□ -0.94
CCDC40-203ENST00000374877 EDDM3AQ14507 147 aa9.19□□□□□ -0.94
CCDC40-203ENST00000374877 SPATA31B1PQ5VZV4 182 aa9.19□□□□□ -0.94
CCDC40-203ENST00000374877 SLC35E4Q6ICL7 350 aa9.19□□□□□ -0.94
CCDC40-203ENST00000374877 INO80CQ6PI98 192 aaPredicted RBP9.19□□□□□ -0.94
CCDC40-203ENST00000374877 MMD2Q8IY49 270 aa9.19□□□□□ -0.94
CCDC40-203ENST00000374877 OR8I2Q8N0Y5 310 aa9.19□□□□□ -0.94
CCDC40-203ENST00000374877 NBEAQ8NFP9 2946 aa9.18□□□□□ -0.94
CCDC40-203ENST00000374877 SFTPCP11686 197 aa9.18□□□□□ -0.94
CCDC40-203ENST00000374877 GCHFRP30047 84 aa9.18□□□□□ -0.94
CCDC40-203ENST00000374877 SLC35B1P78383 322 aa9.18□□□□□ -0.94
CCDC40-203ENST00000374877 FOXF2Q12947 444 aa9.18□□□□□ -0.94
CCDC40-203ENST00000374877 RPEL1Q2QD12 228 aa9.18□□□□□ -0.94
CCDC40-203ENST00000374877 SEPSECSQ9HD40 501 aaKnown RBP9.18□□□□□ -0.94
CCDC40-203ENST00000374877 METRNQ9UJH8 293 aa9.18□□□□□ -0.94
CCDC40-203ENST00000374877 MED13Q9UHV7 2174 aa9.18□□□□□ -0.94
CCDC40-203ENST00000374877 GPR12P47775 334 aa9.18□□□□□ -0.94
CCDC40-203ENST00000374877 KIAA1644Q3SXP7 199 aa9.18□□□□□ -0.94
CCDC40-203ENST00000374877 DMRTA1Q5VZB9 504 aa9.18□□□□□ -0.94
CCDC40-203ENST00000374877 FBXW9Q5XUX1 488 aa9.18□□□□□ -0.94
CCDC40-203ENST00000374877 Q6ZS92 163 aa9.18□□□□□ -0.94
CCDC40-203ENST00000374877 TCTEX1D1Q8N7M0 179 aa9.18□□□□□ -0.94
CCDC40-203ENST00000374877 UHRF2Q96PU4 802 aa9.18□□□□□ -0.94
CCDC40-203ENST00000374877 ZNF586Q9NXT0 402 aa9.18□□□□□ -0.94
CCDC40-203ENST00000374877 NAT8BQ9UHF3 227 aa9.18□□□□□ -0.94
CCDC40-203ENST00000374877 FBXL7Q9UJT9 491 aa9.18□□□□□ -0.94
CCDC40-203ENST00000374877 RNF114Q9Y508 228 aa9.18□□□□□ -0.94
CCDC40-203ENST00000374877 PRR14LQ5THK1 2151 aa9.18□□□□□ -0.94
CCDC40-203ENST00000374877 HCFC1P51610 2035 aa9.18□□□□□ -0.94
CCDC40-203ENST00000374877 TRGV5A0A0B4J1U4 118 aa9.18□□□□□ -0.94
CCDC40-203ENST00000374877 LGALS4P56470 323 aa9.18□□□□□ -0.94
CCDC40-203ENST00000374877 PPP1R14DQ9NXH3 145 aa9.18□□□□□ -0.94
CCDC40-203ENST00000374877 DIRC3C9JPN6 131 aa9.17□□□□□ -0.94
CCDC40-203ENST00000374877 FOXH1O75593 365 aa9.17□□□□□ -0.94
CCDC40-203ENST00000374877 PMCHP20382 165 aa9.17□□□□□ -0.94
CCDC40-203ENST00000374877 AMTP48728 403 aa9.17□□□□□ -0.94
CCDC40-203ENST00000374877 RELQ04864 619 aaPredicted RBP9.17□□□□□ -0.94
CCDC40-203ENST00000374877 GAGE1Q13065 139 aa9.17□□□□□ -0.94
CCDC40-203ENST00000374877 ZNF718Q3SXZ3 478 aa9.17□□□□□ -0.94
CCDC40-203ENST00000374877 RNFT1Q5M7Z0 435 aa9.17□□□□□ -0.94
CCDC40-203ENST00000374877 MRPL52Q86TS9 123 aaKnown RBP9.17□□□□□ -0.94
CCDC40-203ENST00000374877 OR4P4Q8NGL7 312 aa9.17□□□□□ -0.94
CCDC40-203ENST00000374877 GNB4Q9HAV0 340 aa9.17□□□□□ -0.94
CCDC40-203ENST00000374877 GNG12Q9UBI6 72 aa9.17□□□□□ -0.94
CCDC40-203ENST00000374877 M0R1X1 148 aa9.17□□□□□ -0.94
CCDC40-203ENST00000374877 ACTL6BO94805 426 aa9.17□□□□□ -0.94
CCDC40-203ENST00000374877 IL6RP08887 468 aaPredicted RBP9.17□□□□□ -0.94
CCDC40-203ENST00000374877 ERVK-16P61578 105 aa9.17□□□□□ -0.94
CCDC40-203ENST00000374877 GMPPAQ96IJ6 420 aaPredicted RBP9.17□□□□□ -0.94
CCDC40-203ENST00000374877 EAF1Q96JC9 268 aaPredicted RBP9.17□□□□□ -0.94
CCDC40-203ENST00000374877 PPIAL4AQ9Y536 164 aa9.17□□□□□ -0.94
CCDC40-203ENST00000374877 PRRC2CQ9Y520 2896 aaKnown RBP9.17□□□□□ -0.94
CCDC40-203ENST00000374877 DMXL1Q9Y485 3027 aa9.17□□□□□ -0.94
CCDC40-203ENST00000374877 TRAV3A0A0B4J244 114 aa9.17□□□□□ -0.94
CCDC40-203ENST00000374877 SPINT2O43291 252 aa9.17□□□□□ -0.94
CCDC40-203ENST00000374877 ESDP10768 282 aa9.17□□□□□ -0.94
CCDC40-203ENST00000374877 MPV17P39210 176 aa9.17□□□□□ -0.94
CCDC40-203ENST00000374877 TCL1AP56279 114 aa9.17□□□□□ -0.94
CCDC40-203ENST00000374877 TMPRSS3P57727 454 aa9.17□□□□□ -0.94
CCDC40-203ENST00000374877 ST6GALNAC3Q8NDV1 305 aa9.17□□□□□ -0.94
CCDC40-203ENST00000374877 TBL2Q9Y4P3 447 aaKnown RBP9.17□□□□□ -0.94
CCDC40-203ENST00000374877 COMPP49747 757 aaPredicted RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms