RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 ANKRD30BLA7E2S9 258 aa7.41□□□□□ -1.22
ATG4A-203ENST00000372232 SSSCA1O60232 199 aa7.41□□□□□ -1.22
ATG4A-203ENST00000372232 CELA2AP08217 269 aa7.41□□□□□ -1.22
ATG4A-203ENST00000372232 CLDN17P56750 224 aa7.41□□□□□ -1.22
ATG4A-203ENST00000372232 SEC11AP67812 179 aa7.41□□□□□ -1.22
ATG4A-203ENST00000372232 HIST1H1AQ02539 215 aaPredicted RBP7.41□□□□□ -1.22
ATG4A-203ENST00000372232 ZNF324BQ6AW86 544 aaPredicted RBP7.41□□□□□ -1.22
ATG4A-203ENST00000372232 CYYR1Q96J86 154 aa7.41□□□□□ -1.22
ATG4A-203ENST00000372232 C1orf147Q96MC9 270 aaPredicted RBP7.41□□□□□ -1.22
ATG4A-203ENST00000372232 WDR61Q9GZS3 305 aaKnown RBP7.41□□□□□ -1.22
ATG4A-203ENST00000372232 FAM206AQ9NX38 181 aa7.41□□□□□ -1.22
ATG4A-203ENST00000372232 TECTAO75443 2155 aa7.41□□□□□ -1.22
ATG4A-203ENST00000372232 KIAA2026Q5HYC2 2103 aa7.41□□□□□ -1.22
ATG4A-203ENST00000372232 LOC101059948A0A1B0GTJ6 334 aa7.4□□□□□ -1.22
ATG4A-203ENST00000372232 TNFRSF13BO14836 293 aaPredicted RBP7.4□□□□□ -1.22
ATG4A-203ENST00000372232 TNFSF12O43508 249 aa7.4□□□□□ -1.22
ATG4A-203ENST00000372232 ZNF207O43670 478 aaKnown RBP7.4□□□□□ -1.22
ATG4A-203ENST00000372232 KLF7O75840 302 aaPredicted RBP7.4□□□□□ -1.22
ATG4A-203ENST00000372232 IGHG1P01857 330 aa7.4□□□□□ -1.22
ATG4A-203ENST00000372232 CCL4P13236 92 aa7.4□□□□□ -1.22
ATG4A-203ENST00000372232 NRN1LQ496H8 165 aa7.4□□□□□ -1.22
ATG4A-203ENST00000372232 SLC25A34Q6PIV7 304 aa7.4□□□□□ -1.22
ATG4A-203ENST00000372232 OR2K2Q8NGT1 345 aa7.4□□□□□ -1.22
ATG4A-203ENST00000372232 OR4F5Q8NH21 305 aa7.4□□□□□ -1.22
ATG4A-203ENST00000372232 LHX4Q969G2 390 aa7.4□□□□□ -1.22
ATG4A-203ENST00000372232 IMMP1LQ96LU5 166 aa7.4□□□□□ -1.22
ATG4A-203ENST00000372232 RCHY1Q96PM5 261 aa7.4□□□□□ -1.22
ATG4A-203ENST00000372232 GPER1Q99527 375 aa7.4□□□□□ -1.22
ATG4A-203ENST00000372232 SFXN3Q9BWM7 321 aa7.4□□□□□ -1.22
ATG4A-203ENST00000372232 STRADBQ9C0K7 418 aa7.4□□□□□ -1.22
ATG4A-203ENST00000372232 BOKQ9UMX3 212 aaPredicted RBP7.4□□□□□ -1.22
ATG4A-203ENST00000372232 PTRH2Q9Y3E5 179 aaKnown RBP7.4□□□□□ -1.22
ATG4A-203ENST00000372232 NPIPA3F8WFD2 350 aa7.4□□□□□ -1.23
ATG4A-203ENST00000372232 H3BRM9 83 aa7.4□□□□□ -1.23
ATG4A-203ENST00000372232 FCN1O00602 326 aa7.4□□□□□ -1.23
ATG4A-203ENST00000372232 TMEM50AO95807 157 aa7.4□□□□□ -1.23
ATG4A-203ENST00000372232 COX6A1P12074 109 aa7.4□□□□□ -1.23
ATG4A-203ENST00000372232 FKBP2P26885 142 aaKnown RBP7.4□□□□□ -1.23
ATG4A-203ENST00000372232 CLRN1P58418 232 aa7.4□□□□□ -1.23
ATG4A-203ENST00000372232 SCCPDHQ8NBX0 429 aa7.4□□□□□ -1.23
ATG4A-203ENST00000372232 OR8B3Q8NGG8 313 aa7.4□□□□□ -1.23
ATG4A-203ENST00000372232 OR8B2Q96RD0 313 aa7.4□□□□□ -1.23
ATG4A-203ENST00000372232 SPIN2AQ99865 258 aa7.4□□□□□ -1.23
ATG4A-203ENST00000372232 SPIN2BQ9BPZ2 258 aa7.4□□□□□ -1.23
ATG4A-203ENST00000372232 TMEM59Q9BXS4 323 aa7.4□□□□□ -1.23
ATG4A-203ENST00000372232 TNRC6BQ9UPQ9 1833 aaKnown RBP7.39□□□□□ -1.23
ATG4A-203ENST00000372232 FOXI3A8MTJ6 420 aaPredicted RBP7.39□□□□□ -1.23
ATG4A-203ENST00000372232 ZNF20P17024 532 aa7.39□□□□□ -1.23
ATG4A-203ENST00000372232 GATA3P23771 443 aa7.39□□□□□ -1.23
ATG4A-203ENST00000372232 CA7P43166 264 aa7.39□□□□□ -1.23
ATG4A-203ENST00000372232 MFAP5Q13361 173 aa7.39□□□□□ -1.23
ATG4A-203ENST00000372232 ABCA11PQ4W5N1 156 aa7.39□□□□□ -1.23
ATG4A-203ENST00000372232 TMEM200BQ69YZ2 307 aa7.39□□□□□ -1.23
ATG4A-203ENST00000372232 GLIPR1L1Q6UWM5 242 aa7.39□□□□□ -1.23
ATG4A-203ENST00000372232 OR10G8Q8NGN5 311 aa7.39□□□□□ -1.23
ATG4A-203ENST00000372232 SCGB1C1Q8TD33 95 aa7.39□□□□□ -1.23
ATG4A-203ENST00000372232 ZNF418Q8TF45 676 aaPredicted RBP7.39□□□□□ -1.23
ATG4A-203ENST00000372232 TSKUQ8WUA8 353 aa7.39□□□□□ -1.23
ATG4A-203ENST00000372232 OXGR1Q96P68 337 aa7.39□□□□□ -1.23
ATG4A-203ENST00000372232 AP1S3Q96PC3 154 aa7.39□□□□□ -1.23
ATG4A-203ENST00000372232 GNB1LQ9BYB4 327 aa7.39□□□□□ -1.23
ATG4A-203ENST00000372232 PBOV1Q9GZY1 135 aa7.39□□□□□ -1.23
ATG4A-203ENST00000372232 LIN7CQ9NUP9 197 aaKnown RBP7.39□□□□□ -1.23
ATG4A-203ENST00000372232 TP73-AS1Q9UF72 201 aa7.39□□□□□ -1.23
ATG4A-203ENST00000372232 LHFPL6Q9Y693 200 aa7.39□□□□□ -1.23
ATG4A-203ENST00000372232 ADAMTS9Q9P2N4 1935 aa7.39□□□□□ -1.23
ATG4A-203ENST00000372232 IGKV1D-8A0A087WSZ0 117 aa7.39□□□□□ -1.23
ATG4A-203ENST00000372232 A0A0G2JNJ9 132 aa7.39□□□□□ -1.23
ATG4A-203ENST00000372232 FAM90A7PA6NKC0 464 aa7.39□□□□□ -1.23
ATG4A-203ENST00000372232 FAM90A22PA8MWA6 464 aa7.39□□□□□ -1.23
ATG4A-203ENST00000372232 KIAA1324LA8MWY0 1029 aaPredicted RBP7.39□□□□□ -1.23
ATG4A-203ENST00000372232 FAM90A12PA8MX19 464 aa7.39□□□□□ -1.23
ATG4A-203ENST00000372232 FAM90A23PA8MXZ1 464 aa7.39□□□□□ -1.23
ATG4A-203ENST00000372232 ZNF878C9JN71 531 aa7.39□□□□□ -1.23
ATG4A-203ENST00000372232 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.39□□□□□ -1.23
ATG4A-203ENST00000372232 VDAC1P21796 283 aa7.39□□□□□ -1.23
ATG4A-203ENST00000372232 CRYBB3P26998 211 aa7.39□□□□□ -1.23
ATG4A-203ENST00000372232 CDAP32320 146 aa7.39□□□□□ -1.23
ATG4A-203ENST00000372232 REG1BP48304 166 aa7.39□□□□□ -1.23
ATG4A-203ENST00000372232 CARD17Q5XLA6 110 aa7.39□□□□□ -1.23
ATG4A-203ENST00000372232 PPP1R32Q7Z5V6 425 aa7.39□□□□□ -1.23
ATG4A-203ENST00000372232 GALMQ96C23 342 aa7.39□□□□□ -1.23
ATG4A-203ENST00000372232 GPR82Q96P67 336 aa7.39□□□□□ -1.23
ATG4A-203ENST00000372232 PNRC2Q9NPJ4 139 aaKnown RBP7.39□□□□□ -1.23
ATG4A-203ENST00000372232 Q9UFV3 132 aa7.39□□□□□ -1.23
ATG4A-203ENST00000372232 WDFY4Q6ZS81 3184 aa7.39□□□□□ -1.23
ATG4A-203ENST00000372232 ARID1AO14497 2285 aa7.39□□□□□ -1.23
ATG4A-203ENST00000372232 KIF26BQ2KJY2 2108 aa7.38□□□□□ -1.23
ATG4A-203ENST00000372232 RALGAPA1Q6GYQ0 2036 aa7.38□□□□□ -1.23
ATG4A-203ENST00000372232 MDFIC2A0A1B0GVS7 189 aa7.38□□□□□ -1.23
ATG4A-203ENST00000372232 SNURFLB1AK76 121 aa7.38□□□□□ -1.23
ATG4A-203ENST00000372232 J3QR89 54 aa7.38□□□□□ -1.23
ATG4A-203ENST00000372232 DEGS1O15121 323 aa7.38□□□□□ -1.23
ATG4A-203ENST00000372232 CLDN1O95832 211 aa7.38□□□□□ -1.23
ATG4A-203ENST00000372232 MT-ND6P03923 174 aa7.38□□□□□ -1.23
ATG4A-203ENST00000372232 NPPCP23582 126 aa7.38□□□□□ -1.23
ATG4A-203ENST00000372232 NPY1RP25929 384 aa7.38□□□□□ -1.23
ATG4A-203ENST00000372232 RPL24P83731 157 aaKnown RBP7.38□□□□□ -1.23
ATG4A-203ENST00000372232 TSPO2Q5TGU0 170 aa7.38□□□□□ -1.23
ATG4A-203ENST00000372232 SPATA31B1PQ5VZV4 182 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms