RNA–Protein interactions for RNA: ENST00000371621.4

PTPN1-201, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN1, Length 4,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-201ENST00000371621 ETDBQ3ZM63 59 aa9.98□□□□□ -0.81
PTPN1-201ENST00000371621 TMEM177Q53S58 311 aa9.98□□□□□ -0.81
PTPN1-201ENST00000371621 FAM89BQ8N5H3 189 aa9.98□□□□□ -0.81
PTPN1-201ENST00000371621 C5orf30Q96GV9 206 aa9.98□□□□□ -0.81
PTPN1-201ENST00000371621 AP5S1Q9NUS5 200 aa9.98□□□□□ -0.81
PTPN1-201ENST00000371621 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.97□□□□□ -0.81
PTPN1-201ENST00000371621 A0A1B0GX78 115 aa9.97□□□□□ -0.81
PTPN1-201ENST00000371621 IGFBP4P22692 258 aa9.97□□□□□ -0.81
PTPN1-201ENST00000371621 OR8B8Q15620 311 aa9.97□□□□□ -0.81
PTPN1-201ENST00000371621 TMEM196Q5HYL7 178 aa9.97□□□□□ -0.81
PTPN1-201ENST00000371621 Q6ZRM9 215 aa9.97□□□□□ -0.81
PTPN1-201ENST00000371621 DEFB108BQ8NET1 73 aa9.97□□□□□ -0.81
PTPN1-201ENST00000371621 TM4SF19Q96DZ7 209 aa9.97□□□□□ -0.81
PTPN1-201ENST00000371621 ATP6V0BQ99437 205 aa9.97□□□□□ -0.81
PTPN1-201ENST00000371621 CHTOPQ9Y3Y2 248 aaKnown RBP9.97□□□□□ -0.81
PTPN1-201ENST00000371621 TMEM56-RWDD3S4R434 201 aa9.97□□□□□ -0.81
PTPN1-201ENST00000371621 TRAV26-1A0A087WT03 109 aa9.97□□□□□ -0.81
PTPN1-201ENST00000371621 H7C2G1 150 aa9.97□□□□□ -0.81
PTPN1-201ENST00000371621 SYNGR1O43759 233 aa9.97□□□□□ -0.81
PTPN1-201ENST00000371621 ENSAO43768 121 aaKnown RBP9.97□□□□□ -0.81
PTPN1-201ENST00000371621 HIST1H1AQ02539 215 aaPredicted RBP9.97□□□□□ -0.81
PTPN1-201ENST00000371621 ELSPBP1Q96BH3 223 aa9.97□□□□□ -0.81
PTPN1-201ENST00000371621 EAF1Q96JC9 268 aaPredicted RBP9.97□□□□□ -0.81
PTPN1-201ENST00000371621 SIP14410 1827 aa9.97□□□□□ -0.81
PTPN1-201ENST00000371621 NDUFB8O95169 186 aa9.97□□□□□ -0.81
PTPN1-201ENST00000371621 IGKV1D-33P01593 117 aa9.97□□□□□ -0.81
PTPN1-201ENST00000371621 IGKV1-33P01594 117 aa9.97□□□□□ -0.81
PTPN1-201ENST00000371621 CD24P25063 80 aa9.97□□□□□ -0.81
PTPN1-201ENST00000371621 SAMD5Q5TGI4 173 aa9.97□□□□□ -0.81
PTPN1-201ENST00000371621 FNDC7Q5VTL7 733 aa9.97□□□□□ -0.81
PTPN1-201ENST00000371621 TAAR6Q96RI8 345 aa9.97□□□□□ -0.81
PTPN1-201ENST00000371621 SOX21Q9Y651 276 aaPredicted RBP9.97□□□□□ -0.81
PTPN1-201ENST00000371621 BPTFQ12830 3046 aa9.97□□□□□ -0.81
PTPN1-201ENST00000371621 CXorf51AA0A1B0GTR3 108 aa9.96□□□□□ -0.81
PTPN1-201ENST00000371621 HIGD1CA8MV81 97 aa9.96□□□□□ -0.81
PTPN1-201ENST00000371621 TSPAN2O60636 221 aa9.96□□□□□ -0.81
PTPN1-201ENST00000371621 SCRG1O75711 98 aa9.96□□□□□ -0.81
PTPN1-201ENST00000371621 SSTR5P35346 364 aa9.96□□□□□ -0.81
PTPN1-201ENST00000371621 CEBPDP49716 269 aaPredicted RBP9.96□□□□□ -0.81
PTPN1-201ENST00000371621 FXYD7P58549 80 aa9.96□□□□□ -0.81
PTPN1-201ENST00000371621 NPVFQ9HCQ7 196 aa9.96□□□□□ -0.81
PTPN1-201ENST00000371621 KBTBD11-OT1A0A1B0GTJ5 212 aa9.96□□□□□ -0.82
PTPN1-201ENST00000371621 CDIPTO14735 213 aa9.96□□□□□ -0.82
PTPN1-201ENST00000371621 CYC1P08574 325 aa9.96□□□□□ -0.82
PTPN1-201ENST00000371621 MC5RP33032 325 aa9.96□□□□□ -0.82
PTPN1-201ENST00000371621 TCF24Q7RTU0 167 aa9.96□□□□□ -0.82
PTPN1-201ENST00000371621 LRTM2Q8N967 370 aa9.96□□□□□ -0.82
PTPN1-201ENST00000371621 SARAFQ96BY9 339 aa9.96□□□□□ -0.82
PTPN1-201ENST00000371621 HIST1H4GQ99525 98 aa9.96□□□□□ -0.82
PTPN1-201ENST00000371621 COMMD5Q9GZQ3 224 aa9.96□□□□□ -0.82
PTPN1-201ENST00000371621 SS18L2Q9UHA2 77 aa9.96□□□□□ -0.82
PTPN1-201ENST00000371621 PILRBQ9UKJ0 227 aa9.96□□□□□ -0.82
PTPN1-201ENST00000371621 LIPFP07098 398 aa9.96□□□□□ -0.82
PTPN1-201ENST00000371621 CSRP1P21291 193 aaKnown RBP9.96□□□□□ -0.82
PTPN1-201ENST00000371621 CAPZBP47756 277 aa9.96□□□□□ -0.82
PTPN1-201ENST00000371621 TM4SF4P48230 202 aa9.96□□□□□ -0.82
PTPN1-201ENST00000371621 GNB1LQ9BYB4 327 aa9.96□□□□□ -0.82
PTPN1-201ENST00000371621 DSCAML1Q8TD84 2053 aa9.96□□□□□ -0.82
PTPN1-201ENST00000371621 ALPK3Q96L96 1907 aa9.96□□□□□ -0.82
PTPN1-201ENST00000371621 A0A1W2PRE2 83 aa9.95□□□□□ -0.82
PTPN1-201ENST00000371621 CD5LO43866 347 aa9.95□□□□□ -0.82
PTPN1-201ENST00000371621 FRMD6-AS1P0C7T7 363 aa9.95□□□□□ -0.82
PTPN1-201ENST00000371621 APELAP0DMC3 54 aa9.95□□□□□ -0.82
PTPN1-201ENST00000371621 GNG3P63215 75 aa9.95□□□□□ -0.82
PTPN1-201ENST00000371621 KIR3DS1Q14943 382 aa9.95□□□□□ -0.82
PTPN1-201ENST00000371621 PSG3Q16557 428 aa9.95□□□□□ -0.82
PTPN1-201ENST00000371621 STXBP6Q8NFX7 210 aa9.95□□□□□ -0.82
PTPN1-201ENST00000371621 SLC25A40Q8TBP6 338 aa9.95□□□□□ -0.82
PTPN1-201ENST00000371621 ZNF721Q8TF20 911 aa9.95□□□□□ -0.82
PTPN1-201ENST00000371621 TM2D1Q9BX74 207 aa9.95□□□□□ -0.82
PTPN1-201ENST00000371621 KIAA1549Q9HCM3 1950 aa9.95□□□□□ -0.82
PTPN1-201ENST00000371621 A0A0G2JMM0 328 aa9.95□□□□□ -0.82
PTPN1-201ENST00000371621 A0A1W2PPB8 328 aa9.95□□□□□ -0.82
PTPN1-201ENST00000371621 KIR3DP1A8MWS1 328 aa9.95□□□□□ -0.82
PTPN1-201ENST00000371621 SMIM10L1P0DMW3 83 aa9.95□□□□□ -0.82
PTPN1-201ENST00000371621 OPRK1P41145 380 aa9.95□□□□□ -0.82
PTPN1-201ENST00000371621 SLC23A3Q6PIS1 610 aa9.95□□□□□ -0.82
PTPN1-201ENST00000371621 RNF166Q96A37 237 aaPredicted RBP9.95□□□□□ -0.82
PTPN1-201ENST00000371621 SMIM10Q96HG1 83 aa9.95□□□□□ -0.82
PTPN1-201ENST00000371621 LOC102723996A0A087X1L8 192 aa9.95□□□□□ -0.82
PTPN1-201ENST00000371621 CT45A6P0DMU7 189 aa9.95□□□□□ -0.82
PTPN1-201ENST00000371621 CT45A5P0DMU8 189 aa9.95□□□□□ -0.82
PTPN1-201ENST00000371621 CT45A7P0DMV0 189 aa9.95□□□□□ -0.82
PTPN1-201ENST00000371621 ARG2P78540 354 aa9.95□□□□□ -0.82
PTPN1-201ENST00000371621 TFF2Q03403 129 aa9.95□□□□□ -0.82
PTPN1-201ENST00000371621 PLGLAQ15195 96 aa9.95□□□□□ -0.82
PTPN1-201ENST00000371621 CT45A1Q5HYN5 189 aa9.95□□□□□ -0.82
PTPN1-201ENST00000371621 LCNL1Q6ZST4 164 aa9.95□□□□□ -0.82
PTPN1-201ENST00000371621 DRAM1Q8N682 238 aa9.95□□□□□ -0.82
PTPN1-201ENST00000371621 OR4A5Q8NH83 315 aa9.95□□□□□ -0.82
PTPN1-201ENST00000371621 CT45A3Q8NHU0 189 aa9.95□□□□□ -0.82
PTPN1-201ENST00000371621 PPP1R35Q8TAP8 253 aa9.95□□□□□ -0.82
PTPN1-201ENST00000371621 AMMECR1Q9Y4X0 333 aaPredicted RBP9.95□□□□□ -0.82
PTPN1-201ENST00000371621 MED12LQ86YW9 2145 aa9.95□□□□□ -0.82
PTPN1-201ENST00000371621 C19orf67A6NJJ6 358 aa9.94□□□□□ -0.82
PTPN1-201ENST00000371621 CEACAM18A8MTB9 384 aa9.94□□□□□ -0.82
PTPN1-201ENST00000371621 A8MWL6 223 aa9.94□□□□□ -0.82
PTPN1-201ENST00000371621 CCL5P13501 91 aa9.94□□□□□ -0.82
PTPN1-201ENST00000371621 PSMB2P49721 201 aa9.94□□□□□ -0.82
PTPN1-201ENST00000371621 CCR5P51681 352 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms