RNA–Protein interactions for RNA: ENST00000370828.3

GPC4-201, Transcript of glypican 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC4, Length 4,960 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4-201ENST00000370828 PROB1E7EW31 1015 aa10.81□□□□□ -0.68
GPC4-201ENST00000370828 C8orf88P0DMB2 117 aa10.81□□□□□ -0.68
GPC4-201ENST00000370828 SSBP2P81877 361 aaPredicted RBP10.81□□□□□ -0.68
GPC4-201ENST00000370828 VKORC1L1Q8N0U8 176 aa10.81□□□□□ -0.68
GPC4-201ENST00000370828 STPG3Q8N7X2 389 aa10.81□□□□□ -0.68
GPC4-201ENST00000370828 CLDN14O95500 239 aa10.81□□□□□ -0.68
GPC4-201ENST00000370828 RNPS1Q15287 305 aaKnown RBP10.81□□□□□ -0.68
GPC4-201ENST00000370828 C9orf153Q5TBE3 101 aa10.81□□□□□ -0.68
GPC4-201ENST00000370828 SNRNP40Q96DI7 357 aaKnown RBP10.81□□□□□ -0.68
GPC4-201ENST00000370828 ZNF83P51522 516 aa10.8□□□□□ -0.68
GPC4-201ENST00000370828 NABP2Q9BQ15 211 aa10.8□□□□□ -0.68
GPC4-201ENST00000370828 FAM90A10PA6NDY2 464 aa10.8□□□□□ -0.68
GPC4-201ENST00000370828 FAM90A18PA6NE21 464 aa10.8□□□□□ -0.68
GPC4-201ENST00000370828 FAM90A16PA6NEW6 464 aa10.8□□□□□ -0.68
GPC4-201ENST00000370828 FAM90A20PA6NIJ5 464 aa10.8□□□□□ -0.68
GPC4-201ENST00000370828 FAM90A8PA6NJQ4 464 aa10.8□□□□□ -0.68
GPC4-201ENST00000370828 FAM90A7PA6NKC0 464 aa10.8□□□□□ -0.68
GPC4-201ENST00000370828 FAM90A22PA8MWA6 464 aa10.8□□□□□ -0.68
GPC4-201ENST00000370828 FAM90A12PA8MX19 464 aa10.8□□□□□ -0.68
GPC4-201ENST00000370828 FAM90A5PA8MXJ8 464 aa10.8□□□□□ -0.68
GPC4-201ENST00000370828 FAM90A23PA8MXZ1 464 aa10.8□□□□□ -0.68
GPC4-201ENST00000370828 FAM90A15PP0C7V4 464 aa10.8□□□□□ -0.68
GPC4-201ENST00000370828 FAM90A13PP0C7W8 464 aa10.8□□□□□ -0.68
GPC4-201ENST00000370828 FAM90A14PP0C7W9 464 aa10.8□□□□□ -0.68
GPC4-201ENST00000370828 FAM90A24PP0C7X0 464 aa10.8□□□□□ -0.68
GPC4-201ENST00000370828 TWIST1Q15672 202 aa10.8□□□□□ -0.68
GPC4-201ENST00000370828 VSTM2AQ8TAG5 236 aa10.8□□□□□ -0.68
GPC4-201ENST00000370828 NAA38Q9BRA0 125 aaKnown RBP10.8□□□□□ -0.68
GPC4-201ENST00000370828 RNASE7Q9H1E1 156 aaKnown RBP10.8□□□□□ -0.68
GPC4-201ENST00000370828 CEACAM8P31997 349 aaPredicted RBP10.8□□□□□ -0.68
GPC4-201ENST00000370828 HERV-K104P63124 156 aa10.8□□□□□ -0.68
GPC4-201ENST00000370828 C5orf47Q569G3 176 aa10.8□□□□□ -0.68
GPC4-201ENST00000370828 CDPF1Q6NVV7 123 aa10.8□□□□□ -0.68
GPC4-201ENST00000370828 WFDC8Q8IUA0 241 aa10.8□□□□□ -0.68
GPC4-201ENST00000370828 OR1L8Q8NGR8 309 aa10.8□□□□□ -0.68
GPC4-201ENST00000370828 MAFAQ8NHW3 353 aaPredicted RBP10.8□□□□□ -0.68
GPC4-201ENST00000370828 C11orf68Q9H3H3 251 aaKnown RBP10.8□□□□□ -0.68
GPC4-201ENST00000370828 AHCTF1Q8WYP5 2266 aa10.8□□□□□ -0.68
GPC4-201ENST00000370828 HBBP68871 147 aa10.8□□□□□ -0.68
GPC4-201ENST00000370828 OR4X2Q8NGF9 303 aa10.8□□□□□ -0.68
GPC4-201ENST00000370828 SRSF12Q8WXF0 261 aaKnown RBP10.8□□□□□ -0.68
GPC4-201ENST00000370828 CEACAM18A8MTB9 384 aa10.79□□□□□ -0.68
GPC4-201ENST00000370828 B5MCH6 92 aa10.79□□□□□ -0.68
GPC4-201ENST00000370828 NDUFB3O43676 98 aa10.79□□□□□ -0.68
GPC4-201ENST00000370828 KIR2DL1P43626 348 aaPredicted RBP10.79□□□□□ -0.68
GPC4-201ENST00000370828 KIR2DL2P43627 348 aaPredicted RBP10.79□□□□□ -0.68
GPC4-201ENST00000370828 DLX1P56177 255 aa10.79□□□□□ -0.68
GPC4-201ENST00000370828 CDCP2Q5VXM1 449 aa10.79□□□□□ -0.68
GPC4-201ENST00000370828 C20orf144Q9BQM9 153 aa10.79□□□□□ -0.68
GPC4-201ENST00000370828 K7EQS6 105 aa10.79□□□□□ -0.68
GPC4-201ENST00000370828 M0R3E3 92 aa10.79□□□□□ -0.68
GPC4-201ENST00000370828 CD55P08174 381 aa10.79□□□□□ -0.68
GPC4-201ENST00000370828 REG1BP48304 166 aa10.79□□□□□ -0.68
GPC4-201ENST00000370828 CD300EQ496F6 205 aaPredicted RBP10.79□□□□□ -0.68
GPC4-201ENST00000370828 DMRTC2Q8IXT2 367 aaPredicted RBP10.79□□□□□ -0.68
GPC4-201ENST00000370828 FAM89BQ8N5H3 189 aa10.79□□□□□ -0.68
GPC4-201ENST00000370828 TTC9CQ8N5M4 171 aa10.79□□□□□ -0.68
GPC4-201ENST00000370828 TIMD4Q96H15 378 aa10.79□□□□□ -0.68
GPC4-201ENST00000370828 IGHV3OR15-7A0A075B7D8 119 aa10.79□□□□□ -0.68
GPC4-201ENST00000370828 TRGV5A0A0B4J1U4 118 aa10.79□□□□□ -0.68
GPC4-201ENST00000370828 ODAMA1E959 279 aa10.79□□□□□ -0.68
GPC4-201ENST00000370828 HYPMO75409 117 aa10.79□□□□□ -0.68
GPC4-201ENST00000370828 LIFP15018 202 aa10.79□□□□□ -0.68
GPC4-201ENST00000370828 MEOX1P50221 254 aa10.79□□□□□ -0.68
GPC4-201ENST00000370828 CRYBA4P53673 196 aa10.79□□□□□ -0.68
GPC4-201ENST00000370828 PLAURQ03405 335 aa10.79□□□□□ -0.68
GPC4-201ENST00000370828 SPINK14Q6IE38 97 aa10.79□□□□□ -0.68
GPC4-201ENST00000370828 IGHMP01871 453 aa10.78□□□□□ -0.68
GPC4-201ENST00000370828 HOXA4Q00056 320 aaPredicted RBP10.78□□□□□ -0.68
GPC4-201ENST00000370828 SAMD5Q5TGI4 173 aa10.78□□□□□ -0.68
GPC4-201ENST00000370828 RASL11BQ9BPW5 248 aa10.78□□□□□ -0.68
GPC4-201ENST00000370828 IGHV3-48P01763 117 aa10.78□□□□□ -0.68
GPC4-201ENST00000370828 IL6RP08887 468 aaPredicted RBP10.78□□□□□ -0.68
GPC4-201ENST00000370828 SSPNQ14714 243 aa10.78□□□□□ -0.68
GPC4-201ENST00000370828 LRRC10Q5BKY1 277 aa10.78□□□□□ -0.68
GPC4-201ENST00000370828 OCC1Q8TAD7 63 aa10.78□□□□□ -0.68
GPC4-201ENST00000370828 TCF19Q9Y242 345 aa10.78□□□□□ -0.68
GPC4-201ENST00000370828 TMEM56-RWDD3S4R434 201 aa10.78□□□□□ -0.68
GPC4-201ENST00000370828 TRAV8-6A0A0B4J262 113 aa10.78□□□□□ -0.68
GPC4-201ENST00000370828 RPL30P62888 115 aaKnown RBP10.78□□□□□ -0.68
GPC4-201ENST00000370828 ZNF826PQ6ZT77 177 aa10.78□□□□□ -0.68
GPC4-201ENST00000370828 C18orf15Q96N68 181 aa10.78□□□□□ -0.68
GPC4-201ENST00000370828 SPANXDQ9BXN6 97 aa10.78□□□□□ -0.68
GPC4-201ENST00000370828 TSSC4Q9Y5U2 329 aaPredicted RBP10.78□□□□□ -0.68
GPC4-201ENST00000370828 IGKV1D-13A0A0B4J2D9 117 aa10.78□□□□□ -0.68
GPC4-201ENST00000370828 IGKV1-9A0A0C4DH69 117 aa10.78□□□□□ -0.68
GPC4-201ENST00000370828 A0A1B0GW64 132 aa10.78□□□□□ -0.68
GPC4-201ENST00000370828 IGKV1-13P0DP09 117 aa10.78□□□□□ -0.68
GPC4-201ENST00000370828 LCN12Q6JVE5 192 aa10.78□□□□□ -0.68
GPC4-201ENST00000370828 ZNF414Q96IQ9 312 aa10.78□□□□□ -0.68
GPC4-201ENST00000370828 POLR3KQ9Y2Y1 108 aaPredicted RBP10.78□□□□□ -0.68
GPC4-201ENST00000370828 MYO16Q9Y6X6 1858 aa10.78□□□□□ -0.68
GPC4-201ENST00000370828 CD5LO43866 347 aa10.77□□□□□ -0.68
GPC4-201ENST00000370828 C9orf50Q5SZB4 431 aa10.77□□□□□ -0.68
GPC4-201ENST00000370828 SARAFQ96BY9 339 aa10.77□□□□□ -0.68
GPC4-201ENST00000370828 MRPS16Q9Y3D3 137 aaKnown RBP10.77□□□□□ -0.68
GPC4-201ENST00000370828 MYOFQ9NZM1 2061 aa10.77□□□□□ -0.68
GPC4-201ENST00000370828 A0A0G2JLM5 398 aa10.77□□□□□ -0.69
GPC4-201ENST00000370828 RPS20P60866 119 aaKnown RBP10.77□□□□□ -0.69
GPC4-201ENST00000370828 ID3Q02535 119 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms