RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 NPIPB8E9PQR5 432 aa10.7□□□□□ -0.7
HCFC1-202ENST00000369984 NPIPB9F8W1W9 429 aa10.7□□□□□ -0.7
HCFC1-202ENST00000369984 NPIPB7O75200 414 aa10.7□□□□□ -0.7
HCFC1-202ENST00000369984 C8orf88P0DMB2 117 aa10.7□□□□□ -0.7
HCFC1-202ENST00000369984 RND3P61587 244 aa10.7□□□□□ -0.7
HCFC1-202ENST00000369984 FAM159AQ6UWV7 190 aa10.7□□□□□ -0.7
HCFC1-202ENST00000369984 CALYQ9NYX4 217 aa10.7□□□□□ -0.7
HCFC1-202ENST00000369984 SHANK3Q9BYB0 1731 aa10.7□□□□□ -0.7
HCFC1-202ENST00000369984 THY1P04216 161 aa10.7□□□□□ -0.7
HCFC1-202ENST00000369984 DANCRP0C864 163 aa10.7□□□□□ -0.7
HCFC1-202ENST00000369984 GPR6P46095 362 aaPredicted RBP10.7□□□□□ -0.7
HCFC1-202ENST00000369984 CENPWQ5EE01 88 aa10.7□□□□□ -0.7
HCFC1-202ENST00000369984 GOLT1AQ6ZVE7 132 aa10.7□□□□□ -0.7
HCFC1-202ENST00000369984 LHFPL4Q7Z7J7 247 aa10.7□□□□□ -0.7
HCFC1-202ENST00000369984 PPP1R3EQ9H7J1 279 aa10.7□□□□□ -0.7
HCFC1-202ENST00000369984 CFDP00746 253 aaPredicted RBP10.69□□□□□ -0.7
HCFC1-202ENST00000369984 P2RY4P51582 365 aa10.69□□□□□ -0.7
HCFC1-202ENST00000369984 GPR146Q96CH1 333 aa10.69□□□□□ -0.7
HCFC1-202ENST00000369984 ZNF48Q96MX3 618 aaPredicted RBP10.69□□□□□ -0.7
HCFC1-202ENST00000369984 SIRT4Q9Y6E7 314 aaPredicted RBP10.69□□□□□ -0.7
HCFC1-202ENST00000369984 CD1AP06126 327 aa10.69□□□□□ -0.7
HCFC1-202ENST00000369984 CBLN1P23435 193 aa10.69□□□□□ -0.7
HCFC1-202ENST00000369984 LCN2P80188 198 aa10.69□□□□□ -0.7
HCFC1-202ENST00000369984 FAM106AQ4KMX7 169 aa10.69□□□□□ -0.7
HCFC1-202ENST00000369984 PEBP1P30086 187 aaKnown RBP10.69□□□□□ -0.7
HCFC1-202ENST00000369984 RND2P52198 227 aa10.69□□□□□ -0.7
HCFC1-202ENST00000369984 DCAF10Q5QP82 559 aa10.69□□□□□ -0.7
HCFC1-202ENST00000369984 C5orf66Q9H5L9 145 aa10.69□□□□□ -0.7
HCFC1-202ENST00000369984 SPTAN1Q13813 2472 aaKnown RBP10.69□□□□□ -0.7
HCFC1-202ENST00000369984 HLA-DQB1P01920 261 aa10.69□□□□□ -0.7
HCFC1-202ENST00000369984 LINC00305Q7Z4B0 112 aa10.69□□□□□ -0.7
HCFC1-202ENST00000369984 VGLL1Q99990 258 aa10.69□□□□□ -0.7
HCFC1-202ENST00000369984 C19orf24Q9BVV8 132 aa10.69□□□□□ -0.7
HCFC1-202ENST00000369984 COL5A3P25940 1745 aaPredicted RBP10.69□□□□□ -0.7
HCFC1-202ENST00000369984 HIST1H4AP62805 103 aaKnown RBP10.69□□□□□ -0.7
HCFC1-202ENST00000369984 SRSF6Q13247 344 aaKnown RBP10.69□□□□□ -0.7
HCFC1-202ENST00000369984 FAM90A26D6RGX4 464 aa10.69□□□□□ -0.7
HCFC1-202ENST00000369984 IDI2-AS1Q9NZ38 188 aa10.69□□□□□ -0.7
HCFC1-202ENST00000369984 NDUFA3O95167 84 aa10.68□□□□□ -0.7
HCFC1-202ENST00000369984 A0A1W2PP11 408 aa10.68□□□□□ -0.7
HCFC1-202ENST00000369984 PTP4A3O75365 173 aa10.68□□□□□ -0.7
HCFC1-202ENST00000369984 IGKV3-20P01619 116 aa10.68□□□□□ -0.7
HCFC1-202ENST00000369984 PAX2Q02962 417 aa10.68□□□□□ -0.7
HCFC1-202ENST00000369984 KCNS1Q96KK3 526 aa10.68□□□□□ -0.7
HCFC1-202ENST00000369984 PLSCR2Q9NRY7 297 aa10.68□□□□□ -0.7
HCFC1-202ENST00000369984 CENPVL1A0A0U1RR11 272 aa10.68□□□□□ -0.7
HCFC1-202ENST00000369984 ZG16O60844 167 aa10.68□□□□□ -0.7
HCFC1-202ENST00000369984 RRHO14718 337 aa10.68□□□□□ -0.7
HCFC1-202ENST00000369984 HOXD4P09016 255 aaPredicted RBP10.68□□□□□ -0.7
HCFC1-202ENST00000369984 LILRA6Q6PI73 481 aa10.68□□□□□ -0.7
HCFC1-202ENST00000369984 RNASEH2CQ8TDP1 164 aaKnown RBP10.68□□□□□ -0.7
HCFC1-202ENST00000369984 LEAP2Q969E1 77 aa10.68□□□□□ -0.7
HCFC1-202ENST00000369984 PIMREGQ9BSJ6 248 aa10.68□□□□□ -0.7
HCFC1-202ENST00000369984 MRPL32Q9BYC8 188 aaKnown RBP10.68□□□□□ -0.7
HCFC1-202ENST00000369984 TMEM155Q4W5P6 130 aa10.68□□□□□ -0.7
HCFC1-202ENST00000369984 ZNF826PQ6ZT77 177 aa10.68□□□□□ -0.7
HCFC1-202ENST00000369984 MRPL52Q86TS9 123 aaKnown RBP10.68□□□□□ -0.7
HCFC1-202ENST00000369984 IGHV3-48P01763 117 aa10.68□□□□□ -0.7
HCFC1-202ENST00000369984 FOXI3A8MTJ6 420 aaPredicted RBP10.67□□□□□ -0.7
HCFC1-202ENST00000369984 CRPP02741 224 aa10.67□□□□□ -0.7
HCFC1-202ENST00000369984 LDLRAD2Q5SZI1 272 aa10.67□□□□□ -0.7
HCFC1-202ENST00000369984 OR11H12B2RN74 326 aa10.67□□□□□ -0.7
HCFC1-202ENST00000369984 ZNHIT1O43257 154 aa10.67□□□□□ -0.7
HCFC1-202ENST00000369984 H2BFSP57053 126 aa10.67□□□□□ -0.7
HCFC1-202ENST00000369984 ZNF146Q15072 292 aa10.67□□□□□ -0.7
HCFC1-202ENST00000369984 OR11H1Q8NG94 326 aa10.67□□□□□ -0.7
HCFC1-202ENST00000369984 OR11H2Q8NH07 326 aa10.67□□□□□ -0.7
HCFC1-202ENST00000369984 TNFRSF18Q9Y5U5 241 aa10.67□□□□□ -0.7
HCFC1-202ENST00000369984 TRBV5-3A0A0A0MS03 114 aa10.67□□□□□ -0.7
HCFC1-202ENST00000369984 KLF4O43474 513 aa10.67□□□□□ -0.7
HCFC1-202ENST00000369984 ZFP36L2P47974 494 aaKnown RBP10.67□□□□□ -0.7
HCFC1-202ENST00000369984 ITLN1Q8WWA0 313 aa10.67□□□□□ -0.7
HCFC1-202ENST00000369984 TDGF1P13385 188 aa10.67□□□□□ -0.7
HCFC1-202ENST00000369984 EEF1AKMT3Q96AZ1 226 aa10.67□□□□□ -0.7
HCFC1-202ENST00000369984 GPR132Q9UNW8 380 aa10.67□□□□□ -0.7
HCFC1-202ENST00000369984 H3BTX0 84 aa10.67□□□□□ -0.7
HCFC1-202ENST00000369984 ITGBL1O95965 494 aaPredicted RBP10.67□□□□□ -0.7
HCFC1-202ENST00000369984 LINC00614P0C842 121 aa10.67□□□□□ -0.7
HCFC1-202ENST00000369984 ODAMA1E959 279 aa10.67□□□□□ -0.7
HCFC1-202ENST00000369984 SPINT1O43278 529 aa10.67□□□□□ -0.7
HCFC1-202ENST00000369984 ZIC3O60481 467 aa10.67□□□□□ -0.7
HCFC1-202ENST00000369984 FHITP49789 147 aa10.66□□□□□ -0.7
HCFC1-202ENST00000369984 ZNF658BQ4V348 819 aaPredicted RBP10.66□□□□□ -0.7
HCFC1-202ENST00000369984 GSN-AS1Q9NRJ2 163 aa10.66□□□□□ -0.7
HCFC1-202ENST00000369984 IGHV1-45A0A0A0MS14 117 aa10.66□□□□□ -0.7
HCFC1-202ENST00000369984 SAA1P0DJI8 122 aaPredicted RBP10.66□□□□□ -0.7
HCFC1-202ENST00000369984 RPL32P62910 135 aaKnown RBP10.66□□□□□ -0.7
HCFC1-202ENST00000369984 IFITM3Q01628 133 aa10.66□□□□□ -0.7
HCFC1-202ENST00000369984 YBX2Q9Y2T7 364 aaKnown RBP10.66□□□□□ -0.7
HCFC1-202ENST00000369984 PEAR1Q5VY43 1037 aaPredicted RBP10.66□□□□□ -0.7
HCFC1-202ENST00000369984 DCTN5Q9BTE1 182 aa10.66□□□□□ -0.7
HCFC1-202ENST00000369984 SLC25A2Q9BXI2 301 aa10.66□□□□□ -0.7
HCFC1-202ENST00000369984 PLCE1Q9P212 2302 aa10.66□□□□□ -0.7
HCFC1-202ENST00000369984 CEACAM4O75871 244 aa10.66□□□□□ -0.7
HCFC1-202ENST00000369984 NHLRC3Q5JS37 347 aa10.66□□□□□ -0.7
HCFC1-202ENST00000369984 SSBP3Q9BWW4 388 aaPredicted RBP10.66□□□□□ -0.7
HCFC1-202ENST00000369984 CHODLQ9H9P2 273 aa10.66□□□□□ -0.7
HCFC1-202ENST00000369984 LIMS1P48059 325 aa10.66□□□□□ -0.7
HCFC1-202ENST00000369984 TFF2Q03403 129 aa10.66□□□□□ -0.7
HCFC1-202ENST00000369984 P2RY6Q15077 328 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms