RNA–Protein interactions for RNA: ENST00000369746.2

UBE3D-202, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 2,740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-202ENST00000369746 V9GY05 133 aa4.22□□□□□ -1.73
UBE3D-202ENST00000369746 A6NIN4 97 aa4.21□□□□□ -1.74
UBE3D-202ENST00000369746 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.21□□□□□ -1.74
UBE3D-202ENST00000369746 J3QL48 77 aa4.21□□□□□ -1.74
UBE3D-202ENST00000369746 ZNF253O75346 499 aa4.21□□□□□ -1.74
UBE3D-202ENST00000369746 HIST1H1DP16402 221 aaKnown RBP4.21□□□□□ -1.74
UBE3D-202ENST00000369746 DLX6P56179 175 aa4.21□□□□□ -1.74
UBE3D-202ENST00000369746 OR1D5P58170 312 aa4.21□□□□□ -1.74
UBE3D-202ENST00000369746 RND3P61587 244 aa4.21□□□□□ -1.74
UBE3D-202ENST00000369746 MEF2BQ02080 365 aaPredicted RBP4.21□□□□□ -1.74
UBE3D-202ENST00000369746 ATXN7L3Q14CW9 347 aaPredicted RBP4.21□□□□□ -1.74
UBE3D-202ENST00000369746 ADIRFQ15847 76 aa4.21□□□□□ -1.74
UBE3D-202ENST00000369746 FBXL19-AS1Q494R0 122 aa4.21□□□□□ -1.74
UBE3D-202ENST00000369746 ZNF542PQ5EBM4 170 aa4.21□□□□□ -1.74
UBE3D-202ENST00000369746 SLC18B1Q6NT16 456 aa4.21□□□□□ -1.74
UBE3D-202ENST00000369746 MOB1BQ7L9L4 216 aa4.21□□□□□ -1.74
UBE3D-202ENST00000369746 ZNF440Q8IYI8 595 aa4.21□□□□□ -1.74
UBE3D-202ENST00000369746 TTC9CQ8N5M4 171 aa4.21□□□□□ -1.74
UBE3D-202ENST00000369746 KIR3DL3Q8N743 410 aa4.21□□□□□ -1.74
UBE3D-202ENST00000369746 OR4C3Q8NH37 302 aa4.21□□□□□ -1.74
UBE3D-202ENST00000369746 BLNKQ8WV28 456 aa4.21□□□□□ -1.74
UBE3D-202ENST00000369746 RDH5Q92781 318 aa4.21□□□□□ -1.74
UBE3D-202ENST00000369746 C20orf173Q96LM9 149 aa4.21□□□□□ -1.74
UBE3D-202ENST00000369746 SLC25A33Q9BSK2 321 aa4.21□□□□□ -1.74
UBE3D-202ENST00000369746 SLC25A39Q9BZJ4 359 aaPredicted RBP4.21□□□□□ -1.74
UBE3D-202ENST00000369746 CHST6Q9GZX3 395 aa4.21□□□□□ -1.74
UBE3D-202ENST00000369746 ST20Q9HBF5 79 aa4.21□□□□□ -1.74
UBE3D-202ENST00000369746 CYSLTR1Q9Y271 337 aa4.21□□□□□ -1.74
UBE3D-202ENST00000369746 AKAP13Q12802 2813 aa4.21□□□□□ -1.74
UBE3D-202ENST00000369746 CD300LBA8K4G0 201 aa4.21□□□□□ -1.74
UBE3D-202ENST00000369746 H3BRM9 83 aa4.21□□□□□ -1.74
UBE3D-202ENST00000369746 SLC2A10O95528 541 aa4.21□□□□□ -1.74
UBE3D-202ENST00000369746 SFT2D2O95562 160 aa4.21□□□□□ -1.74
UBE3D-202ENST00000369746 HINT1P49773 126 aaPredicted RBP4.21□□□□□ -1.74
UBE3D-202ENST00000369746 TIAL1Q01085 375 aaKnown RBP eCLIP4.21□□□□□ -1.74
UBE3D-202ENST00000369746 EDDM3AQ14507 147 aa4.21□□□□□ -1.74
UBE3D-202ENST00000369746 MSMO1Q15800 293 aa4.21□□□□□ -1.74
UBE3D-202ENST00000369746 ZNF385BQ569K4 471 aa4.21□□□□□ -1.74
UBE3D-202ENST00000369746 BVES-AS1Q5T3Y7 98 aa4.21□□□□□ -1.74
UBE3D-202ENST00000369746 TRIM40Q6P9F5 258 aa4.21□□□□□ -1.74
UBE3D-202ENST00000369746 AGTRAPQ6RW13 159 aa4.21□□□□□ -1.74
UBE3D-202ENST00000369746 ZNF788Q6ZQV5 615 aa4.21□□□□□ -1.74
UBE3D-202ENST00000369746 CDC20BQ86Y33 519 aa4.21□□□□□ -1.74
UBE3D-202ENST00000369746 Q8N1Y9 231 aa4.21□□□□□ -1.74
UBE3D-202ENST00000369746 ZNF439Q8NDP4 499 aa4.21□□□□□ -1.74
UBE3D-202ENST00000369746 OR1L8Q8NGR8 309 aa4.21□□□□□ -1.74
UBE3D-202ENST00000369746 OR2T10Q8NGZ9 312 aa4.21□□□□□ -1.74
UBE3D-202ENST00000369746 OR8S1Q8NH09 359 aa4.21□□□□□ -1.74
UBE3D-202ENST00000369746 IL22RA2Q969J5 263 aa4.21□□□□□ -1.74
UBE3D-202ENST00000369746 ADOQ96SZ5 270 aa4.21□□□□□ -1.74
UBE3D-202ENST00000369746 C1QTNF4Q9BXJ3 329 aa4.21□□□□□ -1.74
UBE3D-202ENST00000369746 TECRQ9NZ01 308 aaKnown RBP4.21□□□□□ -1.74
UBE3D-202ENST00000369746 OR5V1Q9UGF6 321 aa4.21□□□□□ -1.74
UBE3D-202ENST00000369746 COA3Q9Y2R0 106 aaPredicted RBP4.21□□□□□ -1.74
UBE3D-202ENST00000369746 IGLV3-10A0A075B6K4 115 aa4.2□□□□□ -1.74
UBE3D-202ENST00000369746 TRAV9-2A0A087WT02 112 aa4.2□□□□□ -1.74
UBE3D-202ENST00000369746 LOC107984640A0A0U1RRK4 108 aa4.2□□□□□ -1.74
UBE3D-202ENST00000369746 FAM236DA0A1B0GTK5 79 aa4.2□□□□□ -1.74
UBE3D-202ENST00000369746 DIRC3C9JPN6 131 aa4.2□□□□□ -1.74
UBE3D-202ENST00000369746 SPINT2O43291 252 aa4.2□□□□□ -1.74
UBE3D-202ENST00000369746 FAM236CP0DP71 79 aa4.2□□□□□ -1.74
UBE3D-202ENST00000369746 NPY1RP25929 384 aa4.2□□□□□ -1.74
UBE3D-202ENST00000369746 EMP1P54849 157 aa4.2□□□□□ -1.74
UBE3D-202ENST00000369746 TAS2R46P59540 309 aa4.2□□□□□ -1.74
UBE3D-202ENST00000369746 MEF2CQ06413 473 aaPredicted RBP4.2□□□□□ -1.74
UBE3D-202ENST00000369746 DPTQ07507 201 aa4.2□□□□□ -1.74
UBE3D-202ENST00000369746 CYP2G1PQ6ZSU1 146 aa4.2□□□□□ -1.74
UBE3D-202ENST00000369746 BHLHA9Q7RTU4 235 aa4.2□□□□□ -1.74
UBE3D-202ENST00000369746 MOB3BQ86TA1 216 aa4.2□□□□□ -1.74
UBE3D-202ENST00000369746 SIGLECL1Q8N7X8 197 aa4.2□□□□□ -1.74
UBE3D-202ENST00000369746 TEX45Q8NA69 505 aa4.2□□□□□ -1.74
UBE3D-202ENST00000369746 OR4F5Q8NH21 305 aa4.2□□□□□ -1.74
UBE3D-202ENST00000369746 C8orf46Q8TAG6 207 aa4.2□□□□□ -1.74
UBE3D-202ENST00000369746 RASL10AQ92737 203 aa4.2□□□□□ -1.74
UBE3D-202ENST00000369746 APOOQ9BUR5 198 aa4.2□□□□□ -1.74
UBE3D-202ENST00000369746 WDR61Q9GZS3 305 aaKnown RBP4.2□□□□□ -1.74
UBE3D-202ENST00000369746 TPSG1Q9NRR2 321 aa4.2□□□□□ -1.74
UBE3D-202ENST00000369746 DHDHQ9UQ10 334 aa4.2□□□□□ -1.74
UBE3D-202ENST00000369746 SIRT4Q9Y6E7 314 aaPredicted RBP4.2□□□□□ -1.74
UBE3D-202ENST00000369746 ZNF780BQ9Y6R6 833 aa4.2□□□□□ -1.74
UBE3D-202ENST00000369746 X6R8D5 127 aa4.2□□□□□ -1.74
UBE3D-202ENST00000369746 C9orf118A6NHY6 69 aa4.2□□□□□ -1.74
UBE3D-202ENST00000369746 MSGN1A6NI15 193 aa4.2□□□□□ -1.74
UBE3D-202ENST00000369746 TMEM212A6NML5 194 aa4.2□□□□□ -1.74
UBE3D-202ENST00000369746 CDC42EP2O14613 210 aa4.2□□□□□ -1.74
UBE3D-202ENST00000369746 NTSP30990 170 aa4.2□□□□□ -1.74
UBE3D-202ENST00000369746 CLDN6P56747 220 aa4.2□□□□□ -1.74
UBE3D-202ENST00000369746 MFAP5Q13361 173 aa4.2□□□□□ -1.74
UBE3D-202ENST00000369746 ZNF791Q3KP31 576 aaPredicted RBP4.2□□□□□ -1.74
UBE3D-202ENST00000369746 LRRC37A5PQ49AS3 106 aa4.2□□□□□ -1.74
UBE3D-202ENST00000369746 SBSNQ6UWP8 590 aa4.2□□□□□ -1.74
UBE3D-202ENST00000369746 C8orf86Q6ZUL3 223 aa4.2□□□□□ -1.74
UBE3D-202ENST00000369746 CA13Q8N1Q1 262 aa4.2□□□□□ -1.74
UBE3D-202ENST00000369746 KRTCAP2Q8N6L1 136 aa4.2□□□□□ -1.74
UBE3D-202ENST00000369746 TMEM52Q8NDY8 209 aa4.2□□□□□ -1.74
UBE3D-202ENST00000369746 OR10P1Q8NGE3 313 aa4.2□□□□□ -1.74
UBE3D-202ENST00000369746 OR4K13Q8NH42 304 aa4.2□□□□□ -1.74
UBE3D-202ENST00000369746 CLDND2Q8NHS1 167 aa4.2□□□□□ -1.74
UBE3D-202ENST00000369746 PP6455Q8WZ26 134 aa4.2□□□□□ -1.74
UBE3D-202ENST00000369746 SAMD10Q9BYL1 202 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms