RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 BARX1Q9HBU1 254 aaPredicted RBP4.44□□□□□ -1.7
SMNDC1-202ENST00000369603 ZNF318Q5VUA4 2279 aa4.43□□□□□ -1.7
SMNDC1-202ENST00000369603 SLC25A17O43808 307 aa4.43□□□□□ -1.7
SMNDC1-202ENST00000369603 SLC25A5P05141 298 aaKnown RBP4.43□□□□□ -1.7
SMNDC1-202ENST00000369603 TRGC1P0CF51 173 aa4.43□□□□□ -1.7
SMNDC1-202ENST00000369603 FAM106CPP0CH98 169 aa4.43□□□□□ -1.7
SMNDC1-202ENST00000369603 HOXA5P20719 270 aa4.43□□□□□ -1.7
SMNDC1-202ENST00000369603 HNF1AP20823 631 aa4.43□□□□□ -1.7
SMNDC1-202ENST00000369603 DUTP33316 252 aaKnown RBP4.43□□□□□ -1.7
SMNDC1-202ENST00000369603 HLA-DRB5Q30154 266 aa4.43□□□□□ -1.7
SMNDC1-202ENST00000369603 OR4A47Q6IF82 309 aa4.43□□□□□ -1.7
SMNDC1-202ENST00000369603 ST6GALNAC3Q8NDV1 305 aa4.43□□□□□ -1.7
SMNDC1-202ENST00000369603 RAB24Q969Q5 203 aa4.43□□□□□ -1.7
SMNDC1-202ENST00000369603 LPAR2Q9HBW0 351 aa4.43□□□□□ -1.7
SMNDC1-202ENST00000369603 CYTL1Q9NRR1 136 aa4.43□□□□□ -1.7
SMNDC1-202ENST00000369603 A0A1W2PRD5 423 aa4.43□□□□□ -1.7
SMNDC1-202ENST00000369603 A0A1W2PRF3 423 aa4.43□□□□□ -1.7
SMNDC1-202ENST00000369603 A0A1W2PRM7 423 aa4.43□□□□□ -1.7
SMNDC1-202ENST00000369603 ZNF503-AS2A6NEH8 195 aa4.43□□□□□ -1.7
SMNDC1-202ENST00000369603 SLC31A2O15432 143 aa4.43□□□□□ -1.7
SMNDC1-202ENST00000369603 CD5P06127 495 aa4.43□□□□□ -1.7
SMNDC1-202ENST00000369603 OR10J1P30954 320 aa4.43□□□□□ -1.7
SMNDC1-202ENST00000369603 LYZP61626 148 aa4.43□□□□□ -1.7
SMNDC1-202ENST00000369603 CD177Q8N6Q3 437 aa4.43□□□□□ -1.7
SMNDC1-202ENST00000369603 ZNF525Q8N782 197 aa4.43□□□□□ -1.7
SMNDC1-202ENST00000369603 OR1B1Q8NGR6 318 aa4.43□□□□□ -1.7
SMNDC1-202ENST00000369603 Q8WTZ3 238 aa4.43□□□□□ -1.7
SMNDC1-202ENST00000369603 TNFRSF14Q92956 283 aa4.43□□□□□ -1.7
SMNDC1-202ENST00000369603 ZDHHC16Q969W1 377 aa4.43□□□□□ -1.7
SMNDC1-202ENST00000369603 NCOR1P1Q9H4R4 102 aa4.43□□□□□ -1.7
SMNDC1-202ENST00000369603 ZNF430Q9H8G1 570 aaPredicted RBP4.43□□□□□ -1.7
SMNDC1-202ENST00000369603 RPRMQ9NS64 109 aa4.43□□□□□ -1.7
SMNDC1-202ENST00000369603 CBLN4Q9NTU7 201 aa4.43□□□□□ -1.7
SMNDC1-202ENST00000369603 HSPB7Q9UBY9 170 aa4.43□□□□□ -1.7
SMNDC1-202ENST00000369603 RPUSD1Q9UJJ7 312 aaKnown RBP4.43□□□□□ -1.7
SMNDC1-202ENST00000369603 TRAPPC1Q9Y5R8 145 aa4.43□□□□□ -1.7
SMNDC1-202ENST00000369603 KIAA2026Q5HYC2 2103 aa4.43□□□□□ -1.7
SMNDC1-202ENST00000369603 FAM157AC9JC47 383 aa4.43□□□□□ -1.7
SMNDC1-202ENST00000369603 BMI1P35226 326 aa4.43□□□□□ -1.7
SMNDC1-202ENST00000369603 ERVK11-1P61568 191 aa4.43□□□□□ -1.7
SMNDC1-202ENST00000369603 ZNF506Q5JVG8 444 aa4.43□□□□□ -1.7
SMNDC1-202ENST00000369603 VKORC1L1Q8N0U8 176 aa4.43□□□□□ -1.7
SMNDC1-202ENST00000369603 OR10G8Q8NGN5 311 aa4.43□□□□□ -1.7
SMNDC1-202ENST00000369603 OR2T10Q8NGZ9 312 aa4.43□□□□□ -1.7
SMNDC1-202ENST00000369603 OR52E5Q8NH55 327 aa4.43□□□□□ -1.7
SMNDC1-202ENST00000369603 WFIKKN1Q96NZ8 548 aa4.43□□□□□ -1.7
SMNDC1-202ENST00000369603 AP1S3Q96PC3 154 aa4.43□□□□□ -1.7
SMNDC1-202ENST00000369603 PCGF1Q9BSM1 259 aa4.43□□□□□ -1.7
SMNDC1-202ENST00000369603 FUT9Q9Y231 359 aa4.43□□□□□ -1.7
SMNDC1-202ENST00000369603 NCOA6Q14686 2063 aaPredicted RBP4.43□□□□□ -1.7
SMNDC1-202ENST00000369603 SAA2-SAA4A0A096LPE2 208 aa4.42□□□□□ -1.7
SMNDC1-202ENST00000369603 FOXI3A8MTJ6 420 aaPredicted RBP4.42□□□□□ -1.7
SMNDC1-202ENST00000369603 TMEM250H0YL14 139 aa4.42□□□□□ -1.7
SMNDC1-202ENST00000369603 ITGB1BP1O14713 200 aa4.42□□□□□ -1.7
SMNDC1-202ENST00000369603 HYPMO75409 117 aa4.42□□□□□ -1.7
SMNDC1-202ENST00000369603 FOXH1O75593 365 aa4.42□□□□□ -1.7
SMNDC1-202ENST00000369603 FAM157CP0CG43 387 aa4.42□□□□□ -1.7
SMNDC1-202ENST00000369603 SAA2P0DJI9 122 aaPredicted RBP4.42□□□□□ -1.7
SMNDC1-202ENST00000369603 RAB4AP20338 218 aa4.42□□□□□ -1.7
SMNDC1-202ENST00000369603 AGAP20933 346 aa4.42□□□□□ -1.7
SMNDC1-202ENST00000369603 CFHR2P36980 270 aa4.42□□□□□ -1.7
SMNDC1-202ENST00000369603 CA7P43166 264 aa4.42□□□□□ -1.7
SMNDC1-202ENST00000369603 GATA4P43694 442 aa4.42□□□□□ -1.7
SMNDC1-202ENST00000369603 PDLIM4P50479 330 aa4.42□□□□□ -1.7
SMNDC1-202ENST00000369603 COQ2Q96H96 371 aa4.42□□□□□ -1.7
SMNDC1-202ENST00000369603 RCC1LQ96I51 464 aaKnown RBP4.42□□□□□ -1.7
SMNDC1-202ENST00000369603 NOL4LQ96MY1 436 aaPredicted RBP4.42□□□□□ -1.7
SMNDC1-202ENST00000369603 FAM103A1Q9BTL3 118 aaKnown RBP4.42□□□□□ -1.7
SMNDC1-202ENST00000369603 ZNF586Q9NXT0 402 aa4.42□□□□□ -1.7
SMNDC1-202ENST00000369603 ZNF581Q9P0T4 197 aa4.42□□□□□ -1.7
SMNDC1-202ENST00000369603 OTOGLQ3ZCN5 2332 aa4.42□□□□□ -1.7
SMNDC1-202ENST00000369603 ZFHX2Q9C0A1 2572 aaPredicted RBP4.42□□□□□ -1.7
SMNDC1-202ENST00000369603 NBASA2RRP1 2371 aa4.42□□□□□ -1.7
SMNDC1-202ENST00000369603 DIDO1Q9BTC0 2240 aaKnown RBP4.42□□□□□ -1.7
SMNDC1-202ENST00000369603 IGHV3-72A0A0B4J1Y9 119 aa4.42□□□□□ -1.7
SMNDC1-202ENST00000369603 ARF6P62330 175 aa4.42□□□□□ -1.7
SMNDC1-202ENST00000369603 MIC13Q5XKP0 118 aa4.42□□□□□ -1.7
SMNDC1-202ENST00000369603 HEPN1Q6WQI6 88 aa4.42□□□□□ -1.7
SMNDC1-202ENST00000369603 PNKDQ8N490 385 aa4.42□□□□□ -1.7
SMNDC1-202ENST00000369603 GATAD1Q8WUU5 269 aa4.42□□□□□ -1.7
SMNDC1-202ENST00000369603 CACNG8Q8WXS5 425 aa4.42□□□□□ -1.7
SMNDC1-202ENST00000369603 VAMP8Q9BV40 100 aa4.42□□□□□ -1.7
SMNDC1-202ENST00000369603 NPCDR1Q9BY65 106 aa4.42□□□□□ -1.7
SMNDC1-202ENST00000369603 DPM3Q9P2X0 92 aa4.42□□□□□ -1.7
SMNDC1-202ENST00000369603 ESPL1Q14674 2120 aa4.42□□□□□ -1.7
SMNDC1-202ENST00000369603 PCNX1Q96RV3 2341 aa4.42□□□□□ -1.7
SMNDC1-202ENST00000369603 HELTA6NFD8 242 aa4.42□□□□□ -1.7
SMNDC1-202ENST00000369603 WIPF3A6NGB9 483 aa4.42□□□□□ -1.7
SMNDC1-202ENST00000369603 C15orf61A6NNL5 157 aa4.42□□□□□ -1.7
SMNDC1-202ENST00000369603 TMEM178BH3BS89 294 aa4.42□□□□□ -1.7
SMNDC1-202ENST00000369603 LINC00869P0C866 280 aa4.42□□□□□ -1.7
SMNDC1-202ENST00000369603 CCKARP32238 428 aa4.42□□□□□ -1.7
SMNDC1-202ENST00000369603 TPPP2P59282 170 aa4.42□□□□□ -1.7
SMNDC1-202ENST00000369603 KRTDAPP60985 99 aa4.42□□□□□ -1.7
SMNDC1-202ENST00000369603 HERPUD1Q15011 391 aa4.42□□□□□ -1.7
SMNDC1-202ENST00000369603 RNF151Q2KHN1 245 aa4.42□□□□□ -1.7
SMNDC1-202ENST00000369603 SIGLECL1Q8N7X8 197 aa4.42□□□□□ -1.7
SMNDC1-202ENST00000369603 FAM122AQ96E09 287 aa4.42□□□□□ -1.7
SMNDC1-202ENST00000369603 PIMREGQ9BSJ6 248 aa4.42□□□□□ -1.7
SMNDC1-202ENST00000369603 TMUB1Q9BVT8 246 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms